CF504579 | Citrus Genome Database

Overview


Name	CF504579
Unique Name	CF504579
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	436

Libraries


Library Name	Type
Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck)	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of CF504579 vs. ExPASy Swiss-Prot
Match: MOCS3_HUMAN (Adenylyltransferase and sulfurtransferase MOCS3 OS=Homo sapiens GN=MOCS3 PE=1 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 4.804e-39
Identity = 60/115 (52.17%), Postives = 84/115 (73.04%), Query Frame = 2

Query:   92 RSTPPVHIIEHREALRTSNALEILSQYEIVVDATDNAPSRYMISDCCVVLGKPLVSGAALGLEGQLTVYNYNGGPCYRCLFPTPPPTTACQRCADSGVLGVVPGIIGCLQALRPL 436
            R    V  + + +AL  + AL+++ +Y++V D +DN P+RY+++D CV+ G+PLVS +AL  EGQ+TVY+Y+GGPCYRC+FP PPP      CAD GVLGVV G++GCLQAL  L
Sbjct:  147 RLNSAVECVPYTQALTPATALDLVRRYDVVADCSDNVPTRYLVNDACVLAGRPLVSASALRFEGQITVYHYDGGPCYRCIFPQPPPAETVTNCADGGVLGVVTGVLGCLQALEVL 261

HSP 2 Score: 38.5058 bits (88), Expect = 4.804e-39
Identity = 18/34 (52.94%), Postives = 25/34 (73.53%), Query Frame = 1

Query:    1 VELNNMHRQVIHTEPYIGQSKVKSAAATCRSINS 102
            VE++N+ RQV+H E   GQ+K  SAAA+ R +NS
Sbjct:  117 VEMSNLARQVLHGEALAGQAKAFSAAASLRRLNS 150

[Close]

BLAST of CF504579 vs. ExPASy Swiss-Prot
Match: MOCS3_DROSE (Adenylyltransferase and sulfurtransferase MOCS3 OS=Drosophila sechellia GN=GM17034 PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 4.309e-37
Identity = 62/112 (55.36%), Postives = 77/112 (68.75%), Query Frame = 2

Query:  101 PPVHIIEHREALRTSNALEILSQYEIVVDATDNAPSRYMISDCCVVLGKPLVSGAALGLEGQLTVYNYNGGPCYRCLFPTPPPTTACQRCADSGVLGVVPGIIGCLQALRPL 436
            P   I  H   L   NA+ I+  Y++V+D TDN P+RY++SD CV+L KPLVSG+AL ++GQLTVYNY  GPCYRC+FP PPP  A   C D GVLG V G IG +QAL  +
Sbjct:  159 PHCEIHCHSRMLYPHNAMHIIRGYDVVLDCTDNVPTRYLLSDACVMLNKPLVSGSALKMDGQLTVYNYGNGPCYRCIFPVPPPPEAVTNCGDGGVLGAVTGTIGAMQALEAI 270

HSP 2 Score: 36.1946 bits (82), Expect = 4.309e-37
Identity = 15/36 (41.67%), Postives = 21/36 (58.33%), Query Frame = 1

Query:    1 VELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTC 108
            VE +N HRQ++H+E   G SK +SA      +N  C
Sbjct:  126 VERSNFHRQILHSEDRCGMSKAESARIALNELNPHC 161

[Close]

BLAST of CF504579 vs. ExPASy Swiss-Prot
Match: MOCS3_MOUSE (Adenylyltransferase and sulfurtransferase MOCS3 OS=Mus musculus GN=Mocs3 PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 9.524e-37
Identity = 58/115 (50.43%), Postives = 79/115 (68.70%), Query Frame = 2

Query:   92 RSTPPVHIIEHREALRTSNALEILSQYEIVVDATDNAPSRYMISDCCVVLGKPLVSGAALGLEGQLTVYNYNGGPCYRCLFPTPPPTTACQRCADSGVLGVVPGIIGCLQALRPL 436
            R    V  + +  AL    AL+++  Y++V D  DN P+RY+++D CV+ G+PLVS +AL  EGQ+TVY+++GGPCYRC+FP PPP      CAD GVLG VPG++GC QAL  L
Sbjct:  147 RLNSAVECVAYPRALAEDWALDLVRGYDVVADCCDNVPTRYLVNDACVLAGRPLVSASALRFEGQMTVYHHDGGPCYRCVFPRPPPPETVTNCADGGVLGAVPGVLGCAQALEVL 261

HSP 2 Score: 38.891 bits (89), Expect = 9.524e-37
Identity = 18/34 (52.94%), Postives = 24/34 (70.59%), Query Frame = 1

Query:    1 VELNNMHRQVIHTEPYIGQSKVKSAAATCRSINS 102
            VE +N+ RQV+H E   G+SK +SAAA  R +NS
Sbjct:  117 VETSNLARQVLHGEAQAGESKARSAAAALRRLNS 150

[Close]

BLAST of CF504579 vs. ExPASy Swiss-Prot
Match: MOCS3_DROME (Adenylyltransferase and sulfurtransferase MOCS3 OS=Drosophila melanogaster GN=CG13090 PE=1 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 1.241e-36
Identity = 62/112 (55.36%), Postives = 77/112 (68.75%), Query Frame = 2

Query:  101 PPVHIIEHREALRTSNALEILSQYEIVVDATDNAPSRYMISDCCVVLGKPLVSGAALGLEGQLTVYNYNGGPCYRCLFPTPPPTTACQRCADSGVLGVVPGIIGCLQALRPL 436
            P   I  H   L   NA+ I+  Y++V+D TDN P+RY++SD CV+L KPLVSG+AL ++GQLTVYNY  GPCYRC+FP PPP  A   C D GVLG V G IG +QAL  +
Sbjct:  159 PHCEIQCHSRMLYPHNAMHIIRGYDVVLDCTDNVPTRYLLSDACVMLSKPLVSGSALKMDGQLTVYNYANGPCYRCIFPVPPPPEAVTNCGDGGVLGAVTGTIGAMQALEAI 270

HSP 2 Score: 35.4242 bits (80), Expect = 1.241e-36
Identity = 15/36 (41.67%), Postives = 21/36 (58.33%), Query Frame = 1

Query:    1 VELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTC 108
            VE +N HRQ++H+E   G SK +SA      +N  C
Sbjct:  126 VERSNFHRQILHSEDRCGMSKAESARIALLELNPHC 161

[Close]

BLAST of CF504579 vs. ExPASy Swiss-Prot
Match: MOCS3_DROYA (Adenylyltransferase and sulfurtransferase MOCS3 OS=Drosophila yakuba GN=GE18783 PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 2.106e-36
Identity = 61/112 (54.46%), Postives = 78/112 (69.64%), Query Frame = 2

Query:  101 PPVHIIEHREALRTSNALEILSQYEIVVDATDNAPSRYMISDCCVVLGKPLVSGAALGLEGQLTVYNYNGGPCYRCLFPTPPPTTACQRCADSGVLGVVPGIIGCLQALRPL 436
            P   I  H   L + NAL I+  Y++V+D +DN P+RY++SD CV+L KPLVSG+AL ++GQLTVYNY  GPCYRC++P PPP  A   C D GVLG V G IG +QAL  +
Sbjct:  159 PHCEIHCHSRLLYSQNALHIIRGYDVVLDCSDNVPTRYLLSDACVMLRKPLVSGSALKMDGQLTVYNYGNGPCYRCIYPVPPPPEAVTNCGDGGVLGAVTGTIGAMQALEAI 270

HSP 2 Score: 35.4242 bits (80), Expect = 2.106e-36
Identity = 15/36 (41.67%), Postives = 21/36 (58.33%), Query Frame = 1

Query:    1 VELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTC 108
            VE +N HRQ++H+E   G SK +SA      +N  C
Sbjct:  126 VERSNFHRQILHSESRCGMSKAESARIALLELNPHC 161

[Close]

BLAST of CF504579 vs. ExPASy Swiss-Prot
Match: MOCS3_DICDI (Adenylyltransferase and sulfurtransferase MOCS3 OS=Dictyostelium discoideum GN=mocs3 PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 2.964e-35
Identity = 58/107 (54.21%), Postives = 78/107 (72.90%), Query Frame = 2

Query:  107 VHIIEHREALRTSNALEILSQYEIVVDATDNAPSRYMISDCCVVLGKPLVSGAALGLEGQLTVYNYNGGPCYRCLFPTPPPTTACQRCADSGVLGVVPGIIGCLQAL 427
            + +  +     +  A+EI+  Y+IVVDA+DN  +RY+++D CV+ GKPLVSG+AL  EGQ+T YNYN GPCYRC+FPTPPP     +C+D GVLG + G+IG LQAL
Sbjct:  107 IKVNTYETTFTSETAMEIIKNYDIVVDASDNVATRYLVNDACVLTGKPLVSGSALKWEGQITCYNYNNGPCYRCIFPTPPPVETVTKCSDGGVLGPIVGVIGSLQAL 213

HSP 2 Score: 31.9574 bits (71), Expect = 2.964e-35
Identity = 15/34 (44.12%), Postives = 21/34 (61.76%), Query Frame = 1

Query:    1 VELNNMHRQVIHTEPYIGQSKVKSAAATCRSINS 102
            VE++N+HRQ+ H E   G SK  S + T   +NS
Sbjct:   72 VEISNLHRQIGHRESSKGISKAVSLSKTISELNS 105

[Close]

BLAST of CF504579 vs. ExPASy Swiss-Prot
Match: MOCS3_DROPE (Adenylyltransferase and sulfurtransferase MOCS3 OS=Drosophila persimilis GN=GL26133 PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 3.857e-35
Identity = 55/105 (52.38%), Postives = 75/105 (71.43%), Query Frame = 2

Query:  122 HREALRTSNALEILSQYEIVVDATDNAPSRYMISDCCVVLGKPLVSGAALGLEGQLTVYNYNGGPCYRCLFPTPPPTTACQRCADSGVLGVVPGIIGCLQALRPL 436
            H   + + NA+ I+  Y++V+D +DN  +RY+++D CV+L KPLVSG+AL ++GQLTVY Y  GPCYRC++P PPP  A   C D GVLG V GIIG +QAL  +
Sbjct:  164 HSRLINSMNAMHIIRPYDVVLDCSDNVATRYLLNDACVMLRKPLVSGSALKMDGQLTVYGYGQGPCYRCIYPVPPPPEAVTNCGDGGVLGAVTGIIGAMQALEAI 268

HSP 2 Score: 37.7354 bits (86), Expect = 3.857e-35
Identity = 16/36 (44.44%), Postives = 23/36 (63.89%), Query Frame = 1

Query:    1 VELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTC 108
            VE +N+HRQ++H+E   G SK +SA      +NS C
Sbjct:  124 VERSNLHRQILHSEHRCGMSKAESARIALLELNSHC 159

[Close]

BLAST of CF504579 vs. ExPASy Swiss-Prot
Match: MOC32_DROPS (Adenylyltransferase and sulfurtransferase MOCS3 2 OS=Drosophila pseudoobscura pseudoobscura GN=GA12041 PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 3.857e-35
Identity = 55/105 (52.38%), Postives = 75/105 (71.43%), Query Frame = 2

Query:  122 HREALRTSNALEILSQYEIVVDATDNAPSRYMISDCCVVLGKPLVSGAALGLEGQLTVYNYNGGPCYRCLFPTPPPTTACQRCADSGVLGVVPGIIGCLQALRPL 436
            H   + + NA+ I+  Y++V+D +DN  +RY+++D CV+L KPLVSG+AL ++GQLTVY Y  GPCYRC++P PPP  A   C D GVLG V GIIG +QAL  +
Sbjct:  164 HSRLINSMNAMHIIRPYDVVLDCSDNVATRYLLNDACVMLRKPLVSGSALKMDGQLTVYGYGQGPCYRCIYPVPPPPEAVTNCGDGGVLGAVTGIIGAMQALEAI 268

HSP 2 Score: 37.7354 bits (86), Expect = 3.857e-35
Identity = 16/36 (44.44%), Postives = 23/36 (63.89%), Query Frame = 1

Query:    1 VELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTC 108
            VE +N+HRQ++H+E   G SK +SA      +NS C
Sbjct:  124 VERSNLHRQILHSEHRCGMSKAESARIALLELNSHC 159

[Close]

BLAST of CF504579 vs. ExPASy Swiss-Prot
Match: MOC31_DROPS (Adenylyltransferase and sulfurtransferase MOCS3 1 OS=Drosophila pseudoobscura pseudoobscura GN=GA24966 PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 3.857e-35
Identity = 55/105 (52.38%), Postives = 75/105 (71.43%), Query Frame = 2

Query:  122 HREALRTSNALEILSQYEIVVDATDNAPSRYMISDCCVVLGKPLVSGAALGLEGQLTVYNYNGGPCYRCLFPTPPPTTACQRCADSGVLGVVPGIIGCLQALRPL 436
            H   + + NA+ I+  Y++V+D +DN  +RY+++D CV+L KPLVSG+AL ++GQLTVY Y  GPCYRC++P PPP  A   C D GVLG V GIIG +QAL  +
Sbjct:  164 HSRLINSMNAMHIIRPYDVVLDCSDNVATRYLLNDACVMLRKPLVSGSALKMDGQLTVYGYGQGPCYRCIYPVPPPPEAVTNCGDGGVLGAVTGIIGAMQALEAI 268

HSP 2 Score: 37.7354 bits (86), Expect = 3.857e-35
Identity = 16/36 (44.44%), Postives = 23/36 (63.89%), Query Frame = 1

Query:    1 VELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTC 108
            VE +N+HRQ++H+E   G SK +SA      +NS C
Sbjct:  124 VERSNLHRQILHSEHRCGMSKAESARIALLELNSHC 159

[Close]

BLAST of CF504579 vs. ExPASy Swiss-Prot
Match: MOCS3_DROGR (Adenylyltransferase and sulfurtransferase MOCS3 OS=Drosophila grimshawi GN=GH10959 PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 5.025e-35
Identity = 61/113 (53.98%), Postives = 79/113 (69.91%), Query Frame = 2

Query:  101 PPVHIIEHREALRTSNALEILSQYEIVVDATDNAPSRYMISDCCVVLGKPLVSGAALGLEGQLTVYNY-NGGPCYRCLFPTPPPTTACQRCADSGVLGVVPGIIGCLQALRPL 436
            P  HI  H   L   NA++I+  Y++V+D +DN  +RY+++D CV+LGKPLVSG+AL L+GQ+TVYNY   GPCYRC+FP PPP  A   C D GVLG V G IG +QAL  +
Sbjct:  154 PHCHITCHASLLNRFNAMDIMHGYDVVLDCSDNVATRYLLNDACVMLGKPLVSGSALKLDGQITVYNYGTQGPCYRCIFPVPPPPEAVTNCGDGGVLGAVTGTIGAMQALEAI 266

HSP 2 Score: 33.113 bits (74), Expect = 5.025e-35
Identity = 15/36 (41.67%), Postives = 20/36 (55.56%), Query Frame = 1

Query:    1 VELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTC 108
            VE +N+HRQ +HT    G SK +SA      +N  C
Sbjct:  121 VERSNLHRQTLHTVARCGLSKAESARIALLELNPHC 156

The following BLAST results are available for this feature:

BLAST of CF504579 vs. ExPASy Swiss-Prot

BLAST of CF504579 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 59


Match Name	E-value	Identity	Description
MOCS3_HUMAN	4.804e-39	52.17	Adenylyltransferase and sulfurtransferase MOCS3 OS...	[more]
MOCS3_DROSE	4.309e-37	55.36	Adenylyltransferase and sulfurtransferase MOCS3 OS...	[more]
MOCS3_MOUSE	9.524e-37	50.43	Adenylyltransferase and sulfurtransferase MOCS3 OS...	[more]
MOCS3_DROME	1.241e-36	55.36	Adenylyltransferase and sulfurtransferase MOCS3 OS...	[more]
MOCS3_DROYA	2.106e-36	54.46	Adenylyltransferase and sulfurtransferase MOCS3 OS...	[more]
MOCS3_DICDI	2.964e-35	54.21	Adenylyltransferase and sulfurtransferase MOCS3 OS...	[more]
MOCS3_DROPE	3.857e-35	52.38	Adenylyltransferase and sulfurtransferase MOCS3 OS...	[more]
MOC32_DROPS	3.857e-35	52.38	Adenylyltransferase and sulfurtransferase MOCS3 2 ...	[more]
MOC31_DROPS	3.857e-35	52.38	Adenylyltransferase and sulfurtransferase MOCS3 1 ...	[more]
MOCS3_DROGR	5.025e-35	53.98	Adenylyltransferase and sulfurtransferase MOCS3 OS...	[more]

Pages

Properties


Property Name	Value
Genbank description	USDA-FP_120000-068 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-19_H09 5, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CF504579 ID=CF504579; Name=CF504579; organism=Citrus sinensis; type=EST; length=436bp
GTTGAGCTTAACAACATGCACAGGCAGGTTATCCACACCGAACCATATAT
TGGTCAATCAAAAGTGAAATCTGCTGCTGCTACTTGTCGTTCGATCAACT
CCACCTGTTCACATTATTGAGCACAGAGAAGCTTTACGCACATCCAATGC
TTTGGAAATACTGAGTCAATATGAGATAGTTGTAGATGCAACCGATAATG
CTCCAAGCCGTTACATGATCAGTGATTGTTGTGTGGTGTTGGGAAAGCCT
CTGGTATCAGGTGCTGCACTGGGACTGGAAGGGCAGCTCACAGTTTACAA
TTACAATGGAGGTCCTTGCTATCGTTGCCTATTTCCAACCCCACCACCAA
CTACAGCATGCCAAAGATGCGCTGATAGTGGAGTCCTTGGAGTAGTTCCT
GGAATCATTGGCTGTCTCCAAGCCTTAAGGCCATTA