CF504579

Overview
NameCF504579
Unique NameCF504579
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length436
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504579 vs. ExPASy Swiss-Prot
Match: UBA4_YEAS7 (Adenylyltransferase and sulfurtransferase UBA4 OS=Saccharomyces cerevisiae (strain YJM789) GN=UBA4 PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 2.598e-26
Identity = 48/113 (42.48%), Postives = 72/113 (63.72%), Query Frame = 2
Query:  101 PPVHIIEHREALRTSNALEILSQYEIVVDATDNAPSRYMISDCCVVLGKPLVSGAALGLEGQLTVYNYNG-GPCYRCLFPTPPPTTACQRCADSGVLGVVPGIIGCLQALRPL 436
            P ++++ +   L +SNA +I   Y  ++D TD+  +RY++SD  V LG  +VS + LG EGQLT+ N+N  GPCYRC +PTPPP  A   C + GV+G   G++G + A+  L
Sbjct:  135 PHINVVTYPVRLNSSNAFDIFKGYNYILDCTDSPLTRYLVSDVAVNLGITVVSASGLGTEGQLTILNFNNIGPCYRCFYPTPPPPNAVTSCQEGGVIGPCIGLVGTMMAVETL 247          

HSP 2 Score: 30.4166 bits (67), Expect = 2.598e-26
Identity = 13/33 (39.39%), Postives = 19/33 (57.58%), Query Frame = 1
Query:    1 VELNNMHRQVIHTEPYIGQSKVKSAAATCRSIN 99
            VE +N+HRQV+H    +G  K +SA      +N
Sbjct:  102 VETSNLHRQVLHDSSRVGMLKCESARQYITKLN 134          
BLAST of CF504579 vs. ExPASy Swiss-Prot
Match: UBA4_YEAS6 (Adenylyltransferase and sulfurtransferase UBA4 OS=Saccharomyces cerevisiae (strain AWRI1631) GN=UBA4 PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 2.598e-26
Identity = 48/113 (42.48%), Postives = 72/113 (63.72%), Query Frame = 2
Query:  101 PPVHIIEHREALRTSNALEILSQYEIVVDATDNAPSRYMISDCCVVLGKPLVSGAALGLEGQLTVYNYNG-GPCYRCLFPTPPPTTACQRCADSGVLGVVPGIIGCLQALRPL 436
            P ++++ +   L +SNA +I   Y  ++D TD+  +RY++SD  V LG  +VS + LG EGQLT+ N+N  GPCYRC +PTPPP  A   C + GV+G   G++G + A+  L
Sbjct:  135 PHINVVTYPVRLNSSNAFDIFKGYNYILDCTDSPLTRYLVSDVAVNLGITVVSASGLGTEGQLTILNFNNIGPCYRCFYPTPPPPNAVTSCQEGGVIGPCIGLVGTMMAVETL 247          

HSP 2 Score: 30.4166 bits (67), Expect = 2.598e-26
Identity = 13/33 (39.39%), Postives = 19/33 (57.58%), Query Frame = 1
Query:    1 VELNNMHRQVIHTEPYIGQSKVKSAAATCRSIN 99
            VE +N+HRQV+H    +G  K +SA      +N
Sbjct:  102 VETSNLHRQVLHDSSRVGMLKCESARQYITKLN 134          
BLAST of CF504579 vs. ExPASy Swiss-Prot
Match: UBA4_YEAS1 (Adenylyltransferase and sulfurtransferase UBA4 OS=Saccharomyces cerevisiae (strain RM11-1a) GN=UBA4 PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 2.598e-26
Identity = 48/113 (42.48%), Postives = 72/113 (63.72%), Query Frame = 2
Query:  101 PPVHIIEHREALRTSNALEILSQYEIVVDATDNAPSRYMISDCCVVLGKPLVSGAALGLEGQLTVYNYNG-GPCYRCLFPTPPPTTACQRCADSGVLGVVPGIIGCLQALRPL 436
            P ++++ +   L +SNA +I   Y  ++D TD+  +RY++SD  V LG  +VS + LG EGQLT+ N+N  GPCYRC +PTPPP  A   C + GV+G   G++G + A+  L
Sbjct:  135 PHINVVTYPVRLNSSNAFDIFKGYNYILDCTDSPLTRYLVSDVAVNLGITVVSASGLGTEGQLTILNFNNIGPCYRCFYPTPPPPNAVTSCQEGGVIGPCIGLVGTMMAVETL 247          

HSP 2 Score: 30.4166 bits (67), Expect = 2.598e-26
Identity = 13/33 (39.39%), Postives = 19/33 (57.58%), Query Frame = 1
Query:    1 VELNNMHRQVIHTEPYIGQSKVKSAAATCRSIN 99
            VE +N+HRQV+H    +G  K +SA      +N
Sbjct:  102 VETSNLHRQVLHDSSRVGMLKCESARQYITKLN 134          
BLAST of CF504579 vs. ExPASy Swiss-Prot
Match: UBA4_YARLI (Adenylyltransferase and sulfurtransferase UBA4 OS=Yarrowia lipolytica GN=UBA4 PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.603e-26
Identity = 50/101 (49.50%), Postives = 69/101 (68.32%), Query Frame = 2
Query:  134 LRTSNALEILSQYEIVVDATDNAPSRYMISDCCVVLGKPLVSGAALGLEGQLTVYNYNGGPCYRCLFPTPPPTTACQRCADSGVLGVVPGIIGCLQALRPL 436
            L  SN+  +   +++V+D TD    RY+I+D  V+ G P+VS +AL  EGQL++YNYNGGPCYRCLFP PPP  A Q C D G++G V G++G  QA+  +
Sbjct:  119 LSPSNSFSVFEGHDLVLDCTDGPAVRYLINDTAVLSGIPVVSASALKTEGQLSIYNYNGGPCYRCLFPIPPPADAVQTCGDGGIMGPVVGMMGMSQAMEAI 219          

HSP 2 Score: 23.0978 bits (48), Expect = 2.603e-26
Identity = 14/37 (37.84%), Postives = 19/37 (51.35%), Query Frame = 1
Query:    1 VELNNMHRQVIHTEPYIGQSKVKSAAATCRSINSTCS 111
            VE +N+HRQ IH    +   K +SAA     +N   S
Sbjct:   76 VEESNLHRQTIHA-GNVNVPKSESAAEFVGKLNPCIS 111          
BLAST of CF504579 vs. ExPASy Swiss-Prot
Match: MOCS3_CAEBR (Adenylyltransferase and sulfurtransferase MOCS3 OS=Caenorhabditis briggsae GN=CBG01549 PE=3 SV=3)

HSP 1 Score: 116.701 bits (291), Expect = 4.061e-26
Identity = 56/108 (51.85%), Postives = 75/108 (69.44%), Query Frame = 2
Query:  107 VHIIEHREALRTSNALEILSQYEIVVDATDNAPSRYMISDCCVVLGKPLVSGAALGLEGQLTVYNYNGG-PCYRCLFPTPPPTTACQRCADSGVLGVVPGIIGCLQAL 427
            V  + H  +L +SNA+EI   Y+IV D TDN  +RY+I+D CV+L  PLVSG+AL  +GQL+VY+Y    PCYRCLFP+PP  ++   C + GVLG + G IG +QAL
Sbjct:  107 VTTVVHNVSLDSSNAMEIFKNYDIVCDCTDNVATRYLINDVCVLLNIPLVSGSALRWDGQLSVYHYGPDCPCYRCLFPSPPDPSSVTNCNEGGVLGPIVGTIGSMQAL 214          
BLAST of CF504579 vs. ExPASy Swiss-Prot
Match: UBA4_KLULA (Adenylyltransferase and sulfurtransferase UBA4 OS=Kluyveromyces lactis GN=UBA4 PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 9.703e-26
Identity = 49/113 (43.36%), Postives = 70/113 (61.95%), Query Frame = 2
Query:  101 PPVHIIEHREALRTSNALEILSQYEIVVDATDNAPSRYMISDCCVVLGKPLVSGAALGLEGQLTVYNY-NGGPCYRCLFPTPPPTTACQRCADSGVLGVVPGIIGCLQALRPL 436
            P V +  +   L   NA +I   Y++++D TD   +RY+ISD  V LGKP+VS +AL  EGQL+++N+ N GPCYRC +PTPP  T+   C + GVLG   G++G    +  L
Sbjct:  139 PHVSVTSYPVRLSNENAFDIFKDYDVILDCTDTPMARYLISDVAVNLGKPVVSASALRTEGQLSIFNFDNVGPCYRCFYPTPPAPTSVSSCQEGGVLGPCVGLVGVAMVVEAL 251          

HSP 2 Score: 28.8758 bits (63), Expect = 9.703e-26
Identity = 12/33 (36.36%), Postives = 19/33 (57.58%), Query Frame = 1
Query:    1 VELNNMHRQVIHTEPYIGQSKVKSAAATCRSIN 99
            V+ +N+HRQV+H    +G  K +SA      +N
Sbjct:  106 VDTSNLHRQVLHDTIKVGMLKSESAKQVLNKLN 138          
BLAST of CF504579 vs. ExPASy Swiss-Prot
Match: UBA4_DEBHA (Adenylyltransferase and sulfurtransferase UBA4 OS=Debaryomyces hansenii GN=UBA4 PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.039e-24
Identity = 45/113 (39.82%), Postives = 71/113 (62.83%), Query Frame = 2
Query:  101 PPVHIIEHREALRTSNALEILSQYEIVVDATDNAPSRYMISDCCVVLGKPLVSGAALGLEGQLTVYNYNG-GPCYRCLFPTPPPTTACQRCADSGVLGVVPGIIGCLQALRPL 436
            P V +  +   L   NA +I+ +Y++++D TD   +RY+I+D  V+ GK +VSG+ L  +GQL++ N++G GPCYRC +P PP   +   C+D GV+G   G+IG   AL  +
Sbjct:  146 PHVKVNTYPFRLSNDNAFDIIEKYDLILDCTDTPATRYLINDVSVICGKTIVSGSGLKTDGQLSILNFHGIGPCYRCFYPKPPSPGSVTSCSDGGVVGPAIGLIGITMALEAI 258          

HSP 2 Score: 31.9574 bits (71), Expect = 1.039e-24
Identity = 13/33 (39.39%), Postives = 21/33 (63.64%), Query Frame = 1
Query:    1 VELNNMHRQVIHTEPYIGQSKVKSAAATCRSIN 99
            V+++N+HRQV+HT   +G  K +SA      +N
Sbjct:  113 VDISNLHRQVLHTTESVGIHKCESAKRYINKLN 145          
BLAST of CF504579 vs. ExPASy Swiss-Prot
Match: UBA4_CANGA (Adenylyltransferase and sulfurtransferase UBA4 OS=Candida glabrata GN=UBA4 PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 2.983e-24
Identity = 50/113 (44.25%), Postives = 68/113 (60.18%), Query Frame = 2
Query:  101 PPVHIIEHREALRTSNALEILSQYEIVVDATDNAPSRYMISDCCVVLGKPLVSGAALGLEGQLTVYNYNG-GPCYRCLFPTPPPTTACQRCADSGVLGVVPGIIGCLQALRPL 436
            P V+I  +   L   NA  I + Y+IV+D TD   +RY+ISD  V LGK +VS + LG EGQLT+ N+N  GPCYRC +P  P   A   C + GV+G   G++G + A+  L
Sbjct:  128 PHVNINTYPVRLGPENAFSIFADYDIVMDCTDTPLTRYLISDVAVNLGKTVVSASGLGTEGQLTILNFNNIGPCYRCFYPVSPNPYAVSSCQEGGVIGPCIGLVGTMMAVETL 240          

HSP 2 Score: 30.4166 bits (67), Expect = 2.983e-24
Identity = 12/33 (36.36%), Postives = 19/33 (57.58%), Query Frame = 1
Query:    1 VELNNMHRQVIHTEPYIGQSKVKSAAATCRSIN 99
            V+ +N+HRQ IH    +G  K +SA    + +N
Sbjct:   95 VDTSNLHRQTIHNTAKVGMLKCESAKQVLKDLN 127          
BLAST of CF504579 vs. ExPASy Swiss-Prot
Match: UBA4_VANPO (Adenylyltransferase and sulfurtransferase UBA4 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=UBA4 PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.553e-24
Identity = 47/113 (41.59%), Postives = 69/113 (61.06%), Query Frame = 2
Query:  101 PPVHIIEHREALRTSNALEILSQYEIVVDATDNAPSRYMISDCCVVLGKPLVSGAALGLEGQLTVYNY-NGGPCYRCLFPTPPPTTACQRCADSGVLGVVPGIIGCLQALRPL 436
            P V++  +   L  SNA  I   Y+ V+D TD   +RY++SD  V LG  ++S + LG EGQL++ N+ N GPCYRC +PTPPP  +   C + GV+G   G++G + A+  L
Sbjct:  132 PHVNVKTYPVRLDYSNAFTIFENYDYVLDCTDTPITRYLVSDVAVNLGMTVISASGLGSEGQLSILNFKNEGPCYRCFYPTPPPPNSVSSCQEGGVIGPCIGLVGTMMAVETL 244          

HSP 2 Score: 28.4906 bits (62), Expect = 8.553e-24
Identity = 12/33 (36.36%), Postives = 19/33 (57.58%), Query Frame = 1
Query:    1 VELNNMHRQVIHTEPYIGQSKVKSAAATCRSIN 99
            V+ +N+HRQV+H    +G  K +SA      +N
Sbjct:   99 VDNSNLHRQVLHDSSKVGMLKCESARQRINLLN 131          
BLAST of CF504579 vs. ExPASy Swiss-Prot
Match: UBA4_SCLS1 (Adenylyltransferase and sulfurtransferase uba4 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=uba4 PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 2.464e-23
Identity = 55/118 (46.61%), Postives = 73/118 (61.86%), Query Frame = 2
Query:  122 HREALRTS-----NALEILSQYEIVVDATDNAPSRYMISDCCVVLGKPLVSGAALGLEGQLTVYN--------YNGGPCYRCLFPTPPPTTACQRCADSGVLGVVPGIIGCLQALRPL 436
            HR+ L ++     N   I+  Y+IV+D TD+  SRY+ISD CV+L KPLVS +AL  +GQL V N         +GG CYRC+FP PPP  A   C D G++G V G++G LQAL  +
Sbjct:  132 HRQILHSTDRVGVNKAGIVKDYDIVLDCTDHPTSRYLISDICVLLQKPLVSASALRTDGQLIVLNNPALPPGDLSGGSCYRCVFPKPPPPEAVTSCGDGGIIGPVVGVMGVLQALEAI 249          
The following BLAST results are available for this feature:
BLAST of CF504579 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 59
Match NameE-valueIdentityDescription
UBA4_YEAS72.598e-2642.48Adenylyltransferase and sulfurtransferase UBA4 OS=... [more]
UBA4_YEAS62.598e-2642.48Adenylyltransferase and sulfurtransferase UBA4 OS=... [more]
UBA4_YEAS12.598e-2642.48Adenylyltransferase and sulfurtransferase UBA4 OS=... [more]
UBA4_YARLI2.603e-2649.50Adenylyltransferase and sulfurtransferase UBA4 OS=... [more]
MOCS3_CAEBR4.061e-2651.85Adenylyltransferase and sulfurtransferase MOCS3 OS... [more]
UBA4_KLULA9.703e-2643.36Adenylyltransferase and sulfurtransferase UBA4 OS=... [more]
UBA4_DEBHA1.039e-2439.82Adenylyltransferase and sulfurtransferase UBA4 OS=... [more]
UBA4_CANGA2.983e-2444.25Adenylyltransferase and sulfurtransferase UBA4 OS=... [more]
UBA4_VANPO8.553e-2441.59Adenylyltransferase and sulfurtransferase UBA4 OS=... [more]
UBA4_SCLS12.464e-2346.61Adenylyltransferase and sulfurtransferase uba4 OS=... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-068 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-19_H09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504579 ID=CF504579; Name=CF504579; organism=Citrus sinensis; type=EST; length=436bp
GTTGAGCTTAACAACATGCACAGGCAGGTTATCCACACCGAACCATATAT
TGGTCAATCAAAAGTGAAATCTGCTGCTGCTACTTGTCGTTCGATCAACT
CCACCTGTTCACATTATTGAGCACAGAGAAGCTTTACGCACATCCAATGC
TTTGGAAATACTGAGTCAATATGAGATAGTTGTAGATGCAACCGATAATG
CTCCAAGCCGTTACATGATCAGTGATTGTTGTGTGGTGTTGGGAAAGCCT
CTGGTATCAGGTGCTGCACTGGGACTGGAAGGGCAGCTCACAGTTTACAA
TTACAATGGAGGTCCTTGCTATCGTTGCCTATTTCCAACCCCACCACCAA
CTACAGCATGCCAAAGATGCGCTGATAGTGGAGTCCTTGGAGTAGTTCCT
GGAATCATTGGCTGTCTCCAAGCCTTAAGGCCATTA
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