CF504581

Overview
NameCF504581
Unique NameCF504581
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length366
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13532 contig Csv1_Contig13532:86..451. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: SRK6_BRAOE (Putative serine/threonine-protein kinase receptor OS=Brassica oleracea var. acephala GN=SRK6 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 2.028e-16
Identity = 46/121 (38.02%), Postives = 74/121 (61.16%), Query Frame = 2
Query:    5 EATVTRLNPSS-QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            E  V RL+ +S QG  EF+N+V  +A LQH NL ++LG       D++MLIYE L + SLD  ++G++    ++WN R  I    A+GL +LH++  F+ ++ +   +NI +DK+   K+S
Sbjct:  552 EIAVKRLSKTSVQGTDEFMNEVTLIARLQHINLVQVLGCCIE--GDEKMLIYEYLENLSLDSYLFGKTRRSKLNWNERFDITNGVARGLLYLHQDSRFRIIHRDLKVSNILLDKNMIPKIS 670          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: CRK41_ARATH (Cysteine-rich receptor-like protein kinase 41 OS=Arabidopsis thaliana GN=CRK41 PE=2 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 3.460e-16
Identity = 46/121 (38.02%), Postives = 73/121 (60.33%), Query Frame = 2
Query:    5 EATVTRLN-PSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            E  V RL+  S QG  EFIN+V+ +A LQH NL +LLGF  +   ++R+LIYE   + SLD  I+  +    +DW TR +I    A+GL +LHE+  F+ ++ +   +N+ +D   + K++
Sbjct:  368 EIAVKRLSMKSGQGDNEFINEVSLVAKLQHRNLVRLLGFCLQ--GEERILIYEFFKNTSLDHYIFDSNRRMILDWETRYRIISGVARGLLYLHEDSRFKIVHRDMKASNVLLDDAMNPKIA 486          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: Y1534_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Arabidopsis thaliana GN=At1g53420 PE=2 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 1.315e-15
Identity = 41/112 (36.61%), Postives = 67/112 (59.82%), Query Frame = 2
Query:   32 SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGP-PIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            S QG +EF+N++  +++L HPNL KL G     G  Q +L+YE + + SL R ++G  +    +DW TR KI +  A+GL +LHEE   + ++ +    N+ +DK  + K+S
Sbjct:  658 SKQGNREFLNEIGMISALHHPNLVKLYGCCVEGG--QLLLVYEFVENNSLARALFGPQETQLRLDWPTRRKICIGVARGLAYLHEESRLKIVHRDIKATNVLLDKQLNPKIS 767          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: CX32_ARATH (Probable serine/threonine-protein kinase Cx32, chloroplastic OS=Arabidopsis thaliana GN=At4g35600 PE=1 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 1.717e-15
Identity = 48/118 (40.68%), Postives = 72/118 (61.02%), Query Frame = 2
Query:   14 VTRLNPSS-QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            + RLN  S QG  E+ ++VN L  L H NL KLLG+   D   + +L+YE +  GSL+  ++ R+D  P  W+ R+KI + AA+GL FLH     + +Y +F  +NI +D ++ AKLS
Sbjct:  123 IKRLNSESVQGFAEWRSEVNFLGMLSHRNLVKLLGYCRED--KELLLVYEFMPKGSLESHLFRRND--PFPWDLRIKIVIGAARGLAFLHSL-QREVIYRDFKASNILLDSNYDAKLS 235          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: CRK29_ARATH (Cysteine-rich receptor-like protein kinase 29 OS=Arabidopsis thaliana GN=CRK29 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.929e-15
Identity = 43/121 (35.54%), Postives = 74/121 (61.16%), Query Frame = 2
Query:    5 EATVTRLNPSS-QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            E  V RL+ +S QG  EF N++  LA LQH NL +L+GF  +   ++R+L+YE + + SLD+ I+       +DW  R K+    A+GL +LHE+  F+ ++ +   +NI +D++ + K++
Sbjct:  381 EIAVKRLSGNSGQGDNEFKNEILLLAKLQHRNLVRLIGFCIQ--GEERLLVYEFIKNASLDQFIFDTEKRQLLDWVVRYKMIGGIARGLLYLHEDSRFRIIHRDLKASNILLDQEMNPKIA 499          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: APK1A_ARATH (Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.929e-15
Identity = 46/119 (38.66%), Postives = 73/119 (61.34%), Query Frame = 2
Query:   14 VTRLNPSS-QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRS-DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            V +LN    QG +E++ +VN L    H +L KL+G+   D  + R+L+YE +  GSL+  ++ R     P+ W  R+K+AL AA+GL FLH     + +Y +F T+NI +D +++AKLS
Sbjct:  105 VKKLNQDGWQGHQEWLAEVNYLGQFSHRHLVKLIGYCLED--EHRLLVYEFMPRGSLENHLFRRGLYFQPLSWKLRLKVALGAAKGLAFLH-SSETRVIYRDFKTSNILLDSEYNAKLS 220          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: NORK_MEDTR (Nodulation receptor kinase OS=Medicago truncatula GN=NORK PE=1 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 4.996e-15
Identity = 45/120 (37.50%), Postives = 74/120 (61.67%), Query Frame = 2
Query:    8 ATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPI-DWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            A   R + S+QG +EF N++N L+++QH NL  LLG+   +  DQ++L+Y  + +GSL   +YG +    I DW TR+ IAL AA+GL +LH       ++ +  ++NI +D+   AK++
Sbjct:  622 AVKVRSSTSTQGTREFDNELNLLSAIQHENLVPLLGYC--NEYDQQILVYPFMSNGSLLDRLYGEASKRKILDWPTRLSIALGAARGLAYLHTFPGRSVIHRDVKSSNILLDQSMCAKVA 739          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: CRK28_ARATH (Cysteine-rich receptor-like protein kinase 28 OS=Arabidopsis thaliana GN=CRK28 PE=2 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 6.525e-15
Identity = 43/121 (35.54%), Postives = 70/121 (57.85%), Query Frame = 2
Query:    5 EATVTRLN-PSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            E  V RL+  S QG  EF N++  LA LQH NL +LLGF       +R+L+YE + + SLD  I+       +DW  R K+    A+GL +LHE+  ++ ++ +   +NI +D++ + K++
Sbjct:  385 EIAVKRLSCTSGQGDSEFKNEILLLAKLQHRNLVRLLGFCIE--GQERILVYEFIKNASLDNFIFDLKKRQLLDWGVRYKMIGGVARGLLYLHEDSRYRIIHRDLKASNILLDQEMNPKIA 503          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: CRK15_ARATH (Cysteine-rich receptor-like protein kinase 15 OS=Arabidopsis thaliana GN=CRK15 PE=2 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 6.525e-15
Identity = 44/121 (36.36%), Postives = 70/121 (57.85%), Query Frame = 2
Query:    5 EATVTRLNPSS-QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            E  V RL+ SS QG  EF N+V  +A LQH NL +LLGF    G  +R+L+YE + + SLD  ++  +    +DW  R K+    A+G+ +LH++     ++ +   +NI +D D + KL+
Sbjct:  361 EVAVKRLSKSSGQGDTEFKNEVVVVAKLQHRNLVRLLGFSI--GGGERILVYEYMPNKSLDYFLFDPAKQNQLDWTRRYKVIGGIARGILYLHQDSRLTIIHRDLKASNILLDADMNPKLA 479          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: Y5389_ARATH (Probable receptor-like protein kinase At5g38990 OS=Arabidopsis thaliana GN=At5g38990 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 8.522e-15
Identity = 39/113 (34.51%), Postives = 70/113 (61.95%), Query Frame = 2
Query:   32 SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGR--SDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            S+QG KEF  ++  L+ L+H +L  L+G+   D  ++ +L+YE + HG+L   ++ R  +  PP+ W  R++I + AA+GL +LH    +  ++ +  T NI +D++F AK+S
Sbjct:  560 SNQGAKEFDTELEMLSKLRHVHLVSLIGYC--DDDNEMVLVYEYMPHGTLKDHLFRRDKASDPPLSWKRRLEICIGAARGLQYLHTGAKYTIIHRDIKTTNILLDENFVAKVS 670          
The following BLAST results are available for this feature:
BLAST of CF504581 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
SRK6_BRAOE2.028e-1638.02Putative serine/threonine-protein kinase receptor ... [more]
CRK41_ARATH3.460e-1638.02Cysteine-rich receptor-like protein kinase 41 OS=A... [more]
Y1534_ARATH1.315e-1536.61Probable LRR receptor-like serine/threonine-protei... [more]
CX32_ARATH1.717e-1540.68Probable serine/threonine-protein kinase Cx32, chl... [more]
CRK29_ARATH2.929e-1535.54Cysteine-rich receptor-like protein kinase 29 OS=A... [more]
APK1A_ARATH2.929e-1538.66Protein kinase APK1A, chloroplastic OS=Arabidopsis... [more]
NORK_MEDTR4.996e-1537.50Nodulation receptor kinase OS=Medicago truncatula ... [more]
CRK28_ARATH6.525e-1535.54Cysteine-rich receptor-like protein kinase 28 OS=A... [more]
CRK15_ARATH6.525e-1536.36Cysteine-rich receptor-like protein kinase 15 OS=A... [more]
Y5389_ARATH8.522e-1534.51Probable receptor-like protein kinase At5g38990 OS... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-070 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-19_H11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504581 ID=CF504581; Name=CF504581; organism=Citrus sinensis; type=EST; length=366bp
GTTTGAAGCCACTGTTACTCGCCTTAATCCATCCAGCCAGGGTGTGAAGG
AATTTATAAATGATGTAAACACCCTTGCATCATTGCAACATCCAAATCTC
TGTAAATTGCTTGGTTTTCATGCACGTGATGGATCGGACCAGAGAATGTT
GATCTATGAGAGACTTTTTCATGGAAGCTTGGACCGTCTTATTTATGGGA
GATCAGATGGGCCTCCAATTGATTGGAACACCAGGGTAAAAATTGCATTA
TGTGCTGCACAAGGTCTTACCTTCTTGCATGAAGAAGGGCCTTTTCAGGC
AATGTACAATGAATTTTCAACTGCCAACATACAAATTGACAAAGATTTTA
GTGCGAAGCTTTCAGG
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