CF504581

Overview
NameCF504581
Unique NameCF504581
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length366
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13532 contig Csv1_Contig13532:86..451. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: FERON_ARATH (Receptor-like protein kinase FERONIA OS=Arabidopsis thaliana GN=FER PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 3.958e-12
Identity = 37/121 (30.58%), Postives = 71/121 (58.68%), Query Frame = 2
Query:    5 EATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            +  + R NP S QGV EF  ++  L+ L+H +L  L+G+   + + + +L+Y+ + HG++   +Y ++  P + W  R++I + AA+GL +LH       ++ +  T NI +D+ + AK+S
Sbjct:  561 KVAIKRGNPMSEQGVHEFQTEIEMLSKLRHRHLVSLIGYC--EENCEMILVYDYMAHGTMREHLY-KTQNPSLPWKQRLEICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDEKWVAKVS 678          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: Y5241_ARATH (Probable receptor-like protein kinase At5g24010 OS=Arabidopsis thaliana GN=At5g24010 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 5.170e-12
Identity = 36/121 (29.75%), Postives = 71/121 (58.68%), Query Frame = 2
Query:    5 EATVTRLNPSS-QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            +  V R +P S QG+ EF++++  L+ ++H +L  L+G+   +   + +L+YE +  G L   +YG S  PP+ W  R+++ + AA+GL +LH       ++ +  + NI +D ++ AK++
Sbjct:  513 KVAVKRGSPGSRQGLPEFLSEITILSKIRHRHLVSLVGYC--EEQSEMILVYEYMDKGPLKSHLYG-STNPPLSWKQRLEVCIGAARGLHYLHTGSSQGIIHRDIKSTNILLDNNYVAKVA 630          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: Y5005_ARATH (Probable receptor-like protein kinase At5g20050 OS=Arabidopsis thaliana GN=At5g20050 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 5.170e-12
Identity = 37/124 (29.84%), Postives = 70/124 (56.45%), Query Frame = 2
Query:    5 EATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ-RMLIYERLFHGSLDRLIY------GRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSA 355
            +  V R+    +G +EF ++V  +AS+QH NL +L G+ +   +++ R L+Y+ + + SLD  I+      GRS G  + W  R ++A+  A+ L +LH +   + ++ +    NI +D++F A
Sbjct:  127 QVAVKRIEGEEKGEREFRSEVAAIASVQHKNLVRLYGYSSSTSANRPRFLVYDYIVNSSLDIWIFPDRGNRGRSGGGCLSWEQRYQVAIDVAKALAYLHHDCRSKILHLDVKPENILLDENFRA 250          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: Y2393_ARATH (Probable receptor-like protein kinase At2g39360 OS=Arabidopsis thaliana GN=At2g39360 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 5.170e-12
Identity = 39/121 (32.23%), Postives = 67/121 (55.37%), Query Frame = 2
Query:    5 EATVTRLNPSS-QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            E  V R  P S QG+ EF  +V  L   +H +L  L+G+   D + + +++YE +  G+L   +Y   D P + W  R++I + AA+GL +LH       ++ +  +ANI +D +F AK++
Sbjct:  511 EVAVKRGAPQSRQGLAEFKTEVEMLTQFRHRHLVSLIGYC--DENSEMIIVYEYMEKGTLKDHLYDLDDKPRLSWRQRLEICVGAARGLHYLHTGSTRAIIHRDVKSANILLDDNFMAKVA 629          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: RLK6_ARATH (Receptor-like protein kinase At3g21340 OS=Arabidopsis thaliana GN=At3g21340 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 5.170e-12
Identity = 40/111 (36.04%), Postives = 62/111 (55.86%), Query Frame = 2
Query:   32 SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            SSQG KEF  +V  L  + H NL  L+G+   D  +   LIYE + +G L   + G+  G  ++W TR+KI + +AQGL +LH       ++ +  T NI +++   AKL+
Sbjct:  626 SSQGYKEFKAEVELLLRVHHKNLVGLVGYC--DEGENLALIYEYMANGDLREHMSGKRGGSILNWETRLKIVVESAQGLEYLHNGCKPPMVHRDVKTTNILLNEHLHAKLA 734          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: PUB34_ARATH (U-box domain-containing protein 34 OS=Arabidopsis thaliana GN=PUB34 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 5.170e-12
Identity = 34/106 (32.08%), Postives = 61/106 (57.55%), Query Frame = 2
Query:   47 KEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            +EF+ +V  L+ L+HP++  LLG    +G     L+YE L +GSL+  I+ R + PP+ W  R ++    A GL FLH   P   ++ +    NI +++++ +K++
Sbjct:  480 QEFLKEVEVLSQLRHPHVVLLLGACPENGC----LVYEYLENGSLEEYIFHRKNKPPLPWFIRFRVIFEVACGLAFLHSSKPEPIVHRDLKPGNILLNRNYVSKIA 581          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: CRK7_ARATH (Cysteine-rich receptor-like protein kinase 7 OS=Arabidopsis thaliana GN=CRK7 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 5.170e-12
Identity = 38/121 (31.40%), Postives = 69/121 (57.02%), Query Frame = 2
Query:    5 EATVTRLNPSS-QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            E  V RL+ +S QG  EF N+V  +A+L+H NL ++LGF      ++R+L+YE + + SLD  ++  +    + W  R  I    A+G+ +LH++     ++ +   +NI +D D + K++
Sbjct:  360 EVAVKRLSKTSEQGDTEFKNEVVVVANLRHKNLVRILGFSIE--REERILVYEYVENKSLDNFLFDPAKKGQLYWTQRYHIIGGIARGILYLHQDSRLTIIHRDLKASNILLDADMNPKIA 478          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: Y5977_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana GN=At5g49770 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 6.752e-12
Identity = 41/111 (36.94%), Postives = 67/111 (60.36%), Query Frame = 2
Query:   32 SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            S QG  EF  ++  L+ + H N+ KLLGF   D  +Q ML+YE + +GSL   + G++ G  +DW  R+KIAL + +GL +LHE      ++ +  + NI +D+  +AK++
Sbjct:  668 SMQGAFEFKTEIELLSRVHHKNVVKLLGF-CFDQKEQ-MLVYEYIPNGSLRDGLSGKN-GVKLDWTRRLKIALGSGKGLAYLHELADPPIIHRDVKSNNILLDEHLTAKVA 775          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: ANX2_ARATH (Receptor-like protein kinase ANXUR2 OS=Arabidopsis thaliana GN=ANX2 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 6.752e-12
Identity = 38/121 (31.40%), Postives = 71/121 (58.68%), Query Frame = 2
Query:    5 EATVTRLNPSS-QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            +  + + NP+S QG+ EF  ++  L+ L+H +L  L+G+    G  +  LIY+ +  G+L   +Y  +  P + W  R++IA+ AA+GL +LH    +  ++ +  T NI +D+++ AK+S
Sbjct:  545 KVAIKKSNPNSEQGLNEFETEIELLSRLRHKHLVSLIGYCDEGG--EMCLIYDYMSLGTLREHLYN-TKRPQLTWKRRLEIAIGAARGLHYLHTGAKYTIIHRDVKTTNILLDENWVAKVS 662          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: Y5182_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51820 OS=Arabidopsis thaliana GN=At1g51820 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 8.819e-12
Identity = 40/111 (36.04%), Postives = 62/111 (55.86%), Query Frame = 2
Query:   32 SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            SSQG K+F  +V  L  + H NL  L+G+   D  D   LIYE + +G L   + G  +   ++W TR+KI + +AQGL +LH       ++ +  T NI +++ F AKL+
Sbjct:  612 SSQGYKQFKAEVELLLRVHHKNLVGLVGYC--DEGDNLALIYEYMANGDLKEHMSGTRNRFILNWGTRLKIVIESAQGLEYLHNGCKPPMVHRDVKTTNILLNEHFEAKLA 720          
The following BLAST results are available for this feature:
BLAST of CF504581 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
FERON_ARATH3.958e-1230.58Receptor-like protein kinase FERONIA OS=Arabidopsi... [more]
Y5241_ARATH5.170e-1229.75Probable receptor-like protein kinase At5g24010 OS... [more]
Y5005_ARATH5.170e-1229.84Probable receptor-like protein kinase At5g20050 OS... [more]
Y2393_ARATH5.170e-1232.23Probable receptor-like protein kinase At2g39360 OS... [more]
RLK6_ARATH5.170e-1236.04Receptor-like protein kinase At3g21340 OS=Arabidop... [more]
PUB34_ARATH5.170e-1232.08U-box domain-containing protein 34 OS=Arabidopsis ... [more]
CRK7_ARATH5.170e-1231.40Cysteine-rich receptor-like protein kinase 7 OS=Ar... [more]
Y5977_ARATH6.752e-1236.94Probable leucine-rich repeat receptor-like protein... [more]
ANX2_ARATH6.752e-1231.40Receptor-like protein kinase ANXUR2 OS=Arabidopsis... [more]
Y5182_ARATH8.819e-1236.04Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-070 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-19_H11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504581 ID=CF504581; Name=CF504581; organism=Citrus sinensis; type=EST; length=366bp
GTTTGAAGCCACTGTTACTCGCCTTAATCCATCCAGCCAGGGTGTGAAGG
AATTTATAAATGATGTAAACACCCTTGCATCATTGCAACATCCAAATCTC
TGTAAATTGCTTGGTTTTCATGCACGTGATGGATCGGACCAGAGAATGTT
GATCTATGAGAGACTTTTTCATGGAAGCTTGGACCGTCTTATTTATGGGA
GATCAGATGGGCCTCCAATTGATTGGAACACCAGGGTAAAAATTGCATTA
TGTGCTGCACAAGGTCTTACCTTCTTGCATGAAGAAGGGCCTTTTCAGGC
AATGTACAATGAATTTTCAACTGCCAACATACAAATTGACAAAGATTTTA
GTGCGAAGCTTTCAGG
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