CF504581

Overview
NameCF504581
Unique NameCF504581
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length366
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13532 contig Csv1_Contig13532:86..451. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: Y4885_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g08850 OS=Arabidopsis thaliana GN=At4g08850 PE=1 SV=3)

HSP 1 Score: 68.9366 bits (167), Expect = 8.819e-12
Identity = 34/115 (29.57%), Postives = 65/115 (56.52%), Query Frame = 2
Query:   26 NPSSQGVKEFINDVNTLASLQHPNLCKLLGF--HARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            NPS++  +EF+N++  L  ++H N+ KL GF  H R+      L+YE +  GSL +++    +   +DW  R+ +    A  L+++H +     ++ + S+ NI + +D+ AK+S
Sbjct:  814 NPSTK--QEFLNEIRALTEIRHRNVVKLFGFCSHRRN----TFLVYEYMERGSLRKVLENDDEAKKLDWGKRINVVKGVAHALSYMHHDRSPAIVHRDISSGNILLGEDYEAKIS 922          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: Y4245_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g20450 OS=Arabidopsis thaliana GN=At4g20450 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 8.819e-12
Identity = 38/110 (34.55%), Postives = 62/110 (56.36%), Query Frame = 2
Query:   32 SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKL 361
            S+QG K+F  +V+ L  + H NL  L+G+   D     +LIYE + +G+L + + G +   P+ W  R++IA   AQGL +LH       ++ +  + NI +D +F AKL
Sbjct:  625 SAQGYKQFKAEVDLLLRVHHINLVTLVGYC--DEGQHLVLIYEYMSNGNLKQHLSGENSRSPLSWENRLRIAAETAQGLEYLHIGCKPPMIHRDIKSMNILLDNNFQAKL 732          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: Y2296_ARATH (Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana GN=At2g42960 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 8.819e-12
Identity = 42/116 (36.21%), Postives = 65/116 (56.03%), Query Frame = 2
Query:   23 LNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYG--RSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            LN   Q  KEF  +V  +  ++H NL +LLG+        RML+YE +  G+L++ ++G  R  G  + W  R+KI    AQ L +LHE    + ++ +   +NI ID +F+AKLS
Sbjct:  214 LNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIE--GVHRMLVYEYVNSGNLEQWLHGAMRQHGN-LTWEARMKIITGTAQALAYLHEAIEPKVVHRDIKASNILIDDEFNAKLS 326          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: ACCR1_ARATH (Serine/threonine-protein kinase-like protein CCR1 OS=Arabidopsis thaliana GN=CCR1 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 8.819e-12
Identity = 38/124 (30.65%), Postives = 73/124 (58.87%), Query Frame = 2
Query:    5 EATVTRLNPSS---QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSL-DRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            +  V R N ++      +EF  ++  L +++H N+  LLG+    G  +R+L+YE + HG+L D L  G S   P+ W+ R+KIA+  A+GL +LH E   + ++ +  ++N+ +D ++ A+++
Sbjct:  544 QVAVKRANAATIIHTNTREFETELEILCNIRHCNIVNLLGYSTEMG--ERLLVYEYMPHGTLHDHLHSGFS---PLSWSLRIKIAMQTAKGLEYLHNEAEPRIIHGDVKSSNVLLDSEWVARVA 662          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: Y1571_ARATH (Probable leucine-rich repeat receptor-like protein kinase At1g35710 OS=Arabidopsis thaliana GN=At1g35710 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.152e-11
Identity = 34/108 (31.48%), Postives = 60/108 (55.56%), Query Frame = 2
Query:   47 KEFINDVNTLASLQHPNLCKLLGF--HARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            +EF+N+V  L  ++H N+ KL GF  H R       LIYE +  GSL++L+    +   + W  R+ +    A  L+++H +     ++ + S+ NI +D D++AK+S
Sbjct:  895 QEFLNEVKALTEIRHRNVVKLFGFCSHRR----HTFLIYEYMEKGSLNKLLANDEEAKRLTWTKRINVVKGVAHALSYMHHDRITPIVHRDISSGNILLDNDYTAKIS 998          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: WAKLA_ARATH (Wall-associated receptor kinase-like 1 OS=Arabidopsis thaliana GN=WAKL1 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.152e-11
Identity = 34/107 (31.78%), Postives = 62/107 (57.94%), Query Frame = 2
Query:   44 VKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            ++EFIN++  L+ + H N+ KLLG      ++  +L+YE + +G L + ++  SD   + W  R++IA+  A  LT++H    F   + +  T NI +D+ + AK+S
Sbjct:  467 MEEFINEIVLLSQINHRNIVKLLGCCLE--TEVPILVYEYIPNGDLFKRLHDESDDYTMTWEVRLRIAIEIAGALTYMHSAASFPIFHRDIKTTNILLDEKYRAKVS 571          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: IRAK4_HUMAN (Interleukin-1 receptor-associated kinase 4 OS=Homo sapiens GN=IRAK4 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.152e-11
Identity = 45/108 (41.67%), Postives = 66/108 (61.11%), Query Frame = 2
Query:   47 KEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSL-DRLIYGRSDG-PPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            ++F  ++  +A  QH NL +LLGF + DG D   L+Y  + +GSL DRL     DG PP+ W+ R KIA  AA G+ FLHE      ++ +  +ANI +D+ F+AK+S
Sbjct:  228 QQFDQEIKVMAKCQHENLVELLGFSS-DGDDL-CLVYVYMPNGSLLDRL--SCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKIS 328          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: CRK32_ARATH (Putative cysteine-rich receptor-like protein kinase 32 OS=Arabidopsis thaliana GN=CRK32 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.152e-11
Identity = 41/129 (31.78%), Postives = 70/129 (54.26%), Query Frame = 2
Query:    5 EATVTRLNPSS-QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGR--------SDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            E  V RL+ +S QG +EF N+V  +A LQH NL +LLGF      D+++L+YE + + SL+  ++G         +    +DW  R  I     +GL +LH++     ++ +   +NI +D D + K++
Sbjct:  345 EVAVKRLSSNSGQGTQEFKNEVVIVAKLQHKNLVRLLGFCLE--RDEQILVYEFVPNKSLNYFLFGNKQKHLLDPTKKSQLDWKRRYNIIGGITRGLLYLHQDSRLTIIHRDIKASNILLDADMNPKIA 471          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: CRK30_ARATH (Putative cysteine-rich receptor-like protein kinase 30 OS=Arabidopsis thaliana GN=CRK30 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.152e-11
Identity = 40/124 (32.26%), Postives = 71/124 (57.26%), Query Frame = 2
Query:    5 EATVTRLNPSS-QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGP---PIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            E  V RL+ +S QG  EF N+V  +A LQH NL +LLGF  +   ++++L++E + + SLD  ++G ++      +DW  R  I     +GL +LH++     ++ +   +NI +D D + K++
Sbjct:  370 EVAVKRLSRTSDQGELEFKNEVLLVAKLQHRNLVRLLGFALQ--GEEKILVFEFVPNKSLDYFLFGSTNPTKKGQLDWTRRYNIIGGITRGLLYLHQDSRLTIIHRDIKASNILLDADMNPKIA 491          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: Y1699_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g69990 OS=Arabidopsis thaliana GN=At1g69990 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.504e-11
Identity = 38/105 (36.19%), Postives = 64/105 (60.95%), Query Frame = 2
Query:   47 KEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKL 361
            K+F +++N L  ++HPNL  LLGF   +  D+ +L+Y+ + +G+L    Y +     IDW TRV++A+ AA+GL +LH       M+   S+  I +D+DF A++
Sbjct:  334 KQFRSEINKLGQIRHPNLVPLLGFCVVE--DEILLVYKHMANGTL----YSQLQQWDIDWPTRVRVAVGAARGLAWLHHGCQPLYMHQYISSNVILLDEDFDARV 432          
The following BLAST results are available for this feature:
BLAST of CF504581 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
Y4885_ARATH8.819e-1229.57Probable LRR receptor-like serine/threonine-protei... [more]
Y4245_ARATH8.819e-1234.55Probable LRR receptor-like serine/threonine-protei... [more]
Y2296_ARATH8.819e-1236.21Probable receptor-like protein kinase At2g42960 OS... [more]
ACCR1_ARATH8.819e-1230.65Serine/threonine-protein kinase-like protein CCR1 ... [more]
Y1571_ARATH1.152e-1131.48Probable leucine-rich repeat receptor-like protein... [more]
WAKLA_ARATH1.152e-1131.78Wall-associated receptor kinase-like 1 OS=Arabidop... [more]
IRAK4_HUMAN1.152e-1141.67Interleukin-1 receptor-associated kinase 4 OS=Homo... [more]
CRK32_ARATH1.152e-1131.78Putative cysteine-rich receptor-like protein kinas... [more]
CRK30_ARATH1.152e-1132.26Putative cysteine-rich receptor-like protein kinas... [more]
Y1699_ARATH1.504e-1136.19Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-070 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-19_H11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504581 ID=CF504581; Name=CF504581; organism=Citrus sinensis; type=EST; length=366bp
GTTTGAAGCCACTGTTACTCGCCTTAATCCATCCAGCCAGGGTGTGAAGG
AATTTATAAATGATGTAAACACCCTTGCATCATTGCAACATCCAAATCTC
TGTAAATTGCTTGGTTTTCATGCACGTGATGGATCGGACCAGAGAATGTT
GATCTATGAGAGACTTTTTCATGGAAGCTTGGACCGTCTTATTTATGGGA
GATCAGATGGGCCTCCAATTGATTGGAACACCAGGGTAAAAATTGCATTA
TGTGCTGCACAAGGTCTTACCTTCTTGCATGAAGAAGGGCCTTTTCAGGC
AATGTACAATGAATTTTCAACTGCCAACATACAAATTGACAAAGATTTTA
GTGCGAAGCTTTCAGG
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