CF504581

Overview
NameCF504581
Unique NameCF504581
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length366
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: Y2239_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g23950 OS=Arabidopsis thaliana GN=At2g23950 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.351e-11
Identity = 36/107 (33.64%), Postives = 64/107 (59.81%), Query Frame = 2
Query:   35 SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSA 355
            + G  +F  ++  ++   H NL +L+G+ A   S +R+L+Y  + +GS+   +  +   P +DWNTR KIA+ AA+GL +LHE+   + ++ +   ANI +D+ F A
Sbjct:  335 TSGNSQFRTELEMISLAVHRNLLRLIGYCA--SSSERLLVYPYMSNGSVASRLKAK---PALDWNTRKKIAIGAARGLFYLHEQCDPKIIHRDVKAANILLDEYFEA 436          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: SRF6_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsis thaliana GN=SRF6 PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.351e-11
Identity = 40/106 (37.74%), Postives = 61/106 (57.55%), Query Frame = 2
Query:   50 EFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSL-DRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            +FI  V+ +A+L HPN+ KL+G+ A  G  Q +++YE   +GSL D L     +   + WN+RVKIAL  A+ L +LHE      +     +ANI +D + +  LS
Sbjct:  458 DFIEMVSKIANLDHPNVTKLVGYCAEHG--QHLVVYEFHKNGSLHDFLHLSEEESKALVWNSRVKIALGTARALEYLHEVCSPSIVDKNIKSANILLDSELNPHLS 561          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: WAK1_ARATH (Wall-associated receptor kinase 1 OS=Arabidopsis thaliana GN=WAK1 PE=1 SV=2)

HSP 1 Score: 66.6254 bits (161), Expect = 4.377e-11
Identity = 39/115 (33.91%), Postives = 66/115 (57.39%), Query Frame = 2
Query:   20 RLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            RL  SSQ V++FIN+V  L+ + H N+ KLLG      ++  +L+YE + +G+L   ++G      + W  R+KIA+  A  L +LH       ++ +  TANI +D + +AK++
Sbjct:  440 RLGDSSQ-VEQFINEVLVLSQINHRNVVKLLGCCLE--TEVPLLVYEFITNGTLFDHLHGSMIDSSLTWEHRLKIAIEVAGTLAYLHSSASIPIIHRDIKTANILLDVNLTAKVA 551          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: ACCR2_ARATH (Serine/threonine-protein kinase-like protein CCR2 OS=Arabidopsis thaliana GN=CCR2 PE=1 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.377e-11
Identity = 35/104 (33.65%), Postives = 64/104 (61.54%), Query Frame = 2
Query:   53 FINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            F +++  L  ++H N+  LLG+ +  G  +R+L+YE + HG+L   ++G  D   +DW+ R+KI L AA+GL +LH E     ++ +  T+NI +D +  A+++
Sbjct:  562 FESELEILCKIRHNNIVNLLGYCSEMG--ERLLVYEYMPHGTLHDHLHG--DLSQLDWSMRLKIMLQAARGLDYLHNEVDPPIIHRDVKTSNILLDGEMCARIA 661          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: CRK1_ARATH (Cysteine-rich receptor-like protein kinase 1 OS=Arabidopsis thaliana GN=CRK1 PE=2 SV=2)

HSP 1 Score: 66.2402 bits (160), Expect = 5.716e-11
Identity = 30/105 (28.57%), Postives = 62/105 (59.05%), Query Frame = 2
Query:   50 EFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            +F N+VN ++ +QH NL +LLG        + +L+YE + + SLD++++ ++    + W  R  I +  ++GL +LH     + ++ +  T+NI +D++ S K++
Sbjct:  358 QFFNEVNLISGVQHKNLVRLLGCSIE--GPKSLLVYEYVHNRSLDQILFMKNTVHILSWKQRFNIIIGISEGLEYLHRGSEVKIIHRDIKTSNILLDRNLSPKIA 460          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: Y5597_ARATH (Probable receptor-like protein kinase At5g59700 OS=Arabidopsis thaliana GN=At5g59700 PE=2 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.465e-11
Identity = 37/121 (30.58%), Postives = 71/121 (58.68%), Query Frame = 2
Query:    5 EATVTRLNPSSQ-GVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            +  V R NP SQ G+ EF  ++  L+  +H +L  L+G+   D +++ +L+YE + +G+L   +YG S    + W  R++I + +A+GL +LH       ++ +  +ANI +D++  AK++
Sbjct:  506 KVAVKRANPKSQQGLAEFRTEIEMLSQFRHRHLVSLIGYC--DENNEMILVYEYMENGTLKSHLYG-SGLLSLSWKQRLEICIGSARGLHYLHTGDAKPVIHRDVKSANILLDENLMAKVA 623          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: Y1518_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51860 OS=Arabidopsis thaliana GN=At1g51860 PE=2 SV=2)

HSP 1 Score: 65.855 bits (159), Expect = 7.465e-11
Identity = 43/121 (35.54%), Postives = 65/121 (53.72%), Query Frame = 2
Query:    5 EATVTRLNPSS-QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            E  V  L+ SS QG KEF  +V  L  + H +L  L+G+   D  D   LIYE + +G L   + G+  G  + W  R++IA+ AAQGL +LH       ++ +  T NI +++   AKL+
Sbjct:  607 EVAVKMLSHSSAQGYKEFKAEVELLLRVHHRHLVGLVGYC--DDGDNLALIYEYMANGDLRENMSGKRGGNVLTWENRMQIAVEAAQGLEYLHNGCRPPMVHRDVKTTNILLNERCGAKLA 725          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: WAKLB_ARATH (Wall-associated receptor kinase-like 2 OS=Arabidopsis thaliana GN=WAKL2 PE=2 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.465e-11
Identity = 37/107 (34.58%), Postives = 60/107 (56.07%), Query Frame = 2
Query:   44 VKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            V+EFIN+V  LA + H N+ KLLG      ++  +L+YE + +G L + ++  SD   + W  R+ IA+  A  L++LH    F   + +  T NI +D+   AK+S
Sbjct:  454 VEEFINEVVVLAQINHRNIVKLLGCCLE--TEVPVLVYEFVPNGDLCKRLHDESDDYTMTWEVRLHIAIEIAGALSYLHSAASFPIYHRDIKTTNILLDERNRAKVS 558          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: PUB35_ARATH (U-box domain-containing protein 35 OS=Arabidopsis thaliana GN=PUB35 PE=1 SV=2)

HSP 1 Score: 65.855 bits (159), Expect = 7.465e-11
Identity = 34/105 (32.38%), Postives = 60/105 (57.14%), Query Frame = 2
Query:   47 KEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKL 361
            K+F  ++  L+ ++HP+L  LLG     G+    L+YE + +GSL+  ++  ++ PP+ W  R +IA   A  L FLH+  P   ++ +   ANI +D +F +K+
Sbjct:  518 KQFQQELEILSKIRHPHLVLLLGACPEQGA----LVYEYMENGSLEDRLFQVNNSPPLPWFERFRIAWEVAAALVFLHKSKPKPIIHRDLKPANILLDHNFVSKV 618          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: Y5694_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 OS=Arabidopsis thaliana GN=At5g06940 PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.750e-11
Identity = 42/117 (35.90%), Postives = 65/117 (55.56%), Query Frame = 2
Query:   14 VTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            V   N SS+ +K     V T+A ++H N+ ++LGF  +D  +   LIYE   +GSL  ++    D  P  W+ R+KIAL  AQ L ++ ++     ++    +ANI +DKDF  KLS
Sbjct:  620 VNSKNISSKSLKA---QVRTIAKIRHKNITRILGFCFKD--EMIFLIYEFTQNGSLHDMLSRAGDQLP--WSIRLKIALGVAQALAYISKDYVPHLLHRNLKSANIFLDKDFEPKLS 729          
The following BLAST results are available for this feature:
BLAST of CF504581 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
Y2239_ARATH3.351e-1133.64Probable LRR receptor-like serine/threonine-protei... [more]
SRF6_ARATH3.351e-1137.74Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsi... [more]
WAK1_ARATH4.377e-1133.91Wall-associated receptor kinase 1 OS=Arabidopsis t... [more]
ACCR2_ARATH4.377e-1133.65Serine/threonine-protein kinase-like protein CCR2 ... [more]
CRK1_ARATH5.716e-1128.57Cysteine-rich receptor-like protein kinase 1 OS=Ar... [more]
Y5597_ARATH7.465e-1130.58Probable receptor-like protein kinase At5g59700 OS... [more]
Y1518_ARATH7.465e-1135.54Probable LRR receptor-like serine/threonine-protei... [more]
WAKLB_ARATH7.465e-1134.58Wall-associated receptor kinase-like 2 OS=Arabidop... [more]
PUB35_ARATH7.465e-1132.38U-box domain-containing protein 35 OS=Arabidopsis ... [more]
Y5694_ARATH9.750e-1135.90Probably inactive leucine-rich repeat receptor-lik... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-070 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-19_H11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504581 ID=CF504581; Name=CF504581; organism=Citrus sinensis; type=EST; length=366bp
GTTTGAAGCCACTGTTACTCGCCTTAATCCATCCAGCCAGGGTGTGAAGG
AATTTATAAATGATGTAAACACCCTTGCATCATTGCAACATCCAAATCTC
TGTAAATTGCTTGGTTTTCATGCACGTGATGGATCGGACCAGAGAATGTT
GATCTATGAGAGACTTTTTCATGGAAGCTTGGACCGTCTTATTTATGGGA
GATCAGATGGGCCTCCAATTGATTGGAACACCAGGGTAAAAATTGCATTA
TGTGCTGCACAAGGTCTTACCTTCTTGCATGAAGAAGGGCCTTTTCAGGC
AATGTACAATGAATTTTCAACTGCCAACATACAAATTGACAAAGATTTTA
GTGCGAAGCTTTCAGG
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