CF504581

Overview
NameCF504581
Unique NameCF504581
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length366
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13532 contig Csv1_Contig13532:86..451. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: Y5343_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana GN=At1g53430 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.113e-14
Identity = 40/112 (35.71%), Postives = 66/112 (58.93%), Query Frame = 2
Query:   32 SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYG-RSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            S QG +EF+ ++  +++LQHPNL KL G        + +L+YE L + SL R ++G       +DW+TR KI +  A+GL +LHEE   + ++ +    N+ +D   +AK+S
Sbjct:  703 SKQGNREFVTEIGMISALQHPNLVKLYGCCIE--GKELLLVYEYLENNSLARALFGTEKQRLHLDWSTRNKICIGIAKGLAYLHEESRLKIVHRDIKATNVLLDLSLNAKIS 812          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: Y5344_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana GN=At1g53440 PE=1 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 1.454e-14
Identity = 39/112 (34.82%), Postives = 66/112 (58.93%), Query Frame = 2
Query:   32 SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYG-RSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            S QG +EF+ ++  +++LQHPNL KL G        + +L+YE L + SL R ++G       +DW+TR K+ +  A+GL +LHEE   + ++ +    N+ +D   +AK+S
Sbjct:  701 SKQGNREFVTEIGMISALQHPNLVKLYGCCIE--GKELLLVYEYLENNSLARALFGTEKQRLHLDWSTRNKVCIGIAKGLAYLHEESRLKIVHRDIKATNVLLDLSLNAKIS 810          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: Y1677_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g67720 OS=Arabidopsis thaliana GN=At1g67720 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.454e-14
Identity = 41/113 (36.28%), Postives = 72/113 (63.72%), Query Frame = 2
Query:   26 NPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            +PSS   ++F+ +V  L+ + H NL  L+G+   + +D+R+L+YE + +GSL   ++G SD  P+DW TR++IA  AA+GL +LH       ++ +  ++NI +D +  AK+S
Sbjct:  638 DPSSHLNRQFVTEVALLSRIHHRNLVPLIGYC--EEADRRILVYEYMHNGSLGDHLHGSSDYKPLDWLTRLQIAQDAAKGLEYLHTGCNPSIIHRDVKSSNILLDINMRAKVS 748          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: LRKA2_ARATH (Lectin-domain containing receptor kinase A4.2 OS=Arabidopsis thaliana GN=LECRKA4.2 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.454e-14
Identity = 44/122 (36.07%), Postives = 71/122 (58.20%), Query Frame = 2
Query:    5 EATVTRLNPSS-QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGR--SDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKL 361
            +  V ++ P+S QGV+EFI ++ +L  L+H NL  L G+  +   +  +LIY+ + +GSLD L+Y R    G  + WN R KIA   A GL +LHEE     ++ +   +N+ I+ D + +L
Sbjct:  387 QIAVKKITPNSMQGVREFIAEIESLGRLRHKNLVNLQGWCKQ--KNDLLLIYDYIPNGSLDSLLYSRPRQSGVVLSWNARFKIAKGIASGLLYLHEEWEKVVIHRDIKPSNVLIEDDMNPRL 506          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: CRK26_ARATH (Cysteine-rich receptor-like protein kinase 26 OS=Arabidopsis thaliana GN=CRK26 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.454e-14
Identity = 42/118 (35.59%), Postives = 70/118 (59.32%), Query Frame = 2
Query:   14 VTRLNPSSQ-GVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            V RL+ ++Q G  EF N+   +A LQH NL KLLG+       +R+L+YE L H SLD+ I+    G  ++W  R KI    A+GL +LH++   + ++ +   +NI +D++ + K++
Sbjct:  371 VKRLSKNAQQGETEFKNEFLLVAKLQHRNLVKLLGYSIE--GTERLLVYEFLPHTSLDKFIFDPIQGNELEWEIRYKIIGGVARGLLYLHQDSRLRIIHRDLKASNILLDEEMTPKIA 486          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: PSKR1_DAUCA (Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.898e-14
Identity = 41/107 (38.32%), Postives = 67/107 (62.62%), Query Frame = 2
Query:   47 KEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPP-IDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            +EF  +V TL+  QHPNL  LLG+   +  + ++LIY  + +GSLD  ++ + DGPP +DW TR++IA  AA+GL +LH+      ++ +  ++NI +   F A L+
Sbjct:  782 REFQAEVETLSRAQHPNLVHLLGYC--NYKNDKLLIYSYMDNGSLDYWLHEKVDGPPSLDWKTRLRIARGAAEGLAYLHQSCEPHILHRDIKSSNILLSDTFVAHLA 886          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: CRK5_ARATH (Cysteine-rich receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=CRK5 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.898e-14
Identity = 43/121 (35.54%), Postives = 70/121 (57.85%), Query Frame = 2
Query:    5 EATVTRLNPSS-QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            +  V RL+ +S QG KEF N+V  +A LQH NL KLLGF      ++++L+YE + + SLD  ++       +DW TR KI    A+G+ +LH++     ++ +    NI +D D + K++
Sbjct:  364 QVAVKRLSKTSGQGEKEFKNEVVVVAKLQHRNLVKLLGFCLE--REEKILVYEFVSNKSLDYFLFDSRMQSQLDWTTRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLDADMNPKVA 482          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: CRK10_ARATH (Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana GN=CRK10 PE=1 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 1.898e-14
Identity = 45/121 (37.19%), Postives = 72/121 (59.50%), Query Frame = 2
Query:    5 EATVTRLNPSS-QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            E  V RL+ SS QG  EF N+V  +A LQH NL +LLGF   DG ++R+L+YE + + SLD  ++  +    +DW  R KI    A+G+ +LH++     ++ +   +NI +D D + K++
Sbjct:  361 EVAVKRLSKSSGQGEVEFKNEVVLVAKLQHRNLVRLLGF-CLDG-EERVLVYEYVPNKSLDYFLFDPAKKGQLDWTRRYKIIGGVARGILYLHQDSRLTIIHRDLKASNILLDADMNPKIA 479          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: LRKA3_ARATH (Lectin-domain containing receptor kinase A4.3 OS=Arabidopsis thaliana GN=LECRKA4.3 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.479e-14
Identity = 45/124 (36.29%), Postives = 71/124 (57.26%), Query Frame = 2
Query:    5 EATVTRLNPSS-QGVKEFINDVNTLASLQHPNLCKLLGF--HARDGSDQRMLIYERLFHGSLDRLIYG--RSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKL 361
            +  V ++ P+S QGV+EF+ ++ +L  L+H NL  L G+  H  D     +LIY+ + +GSLD L+Y   R  G  + WN R +IA   A GL +LHEE     ++ +   +N+ ID D + +L
Sbjct:  388 QIAVKKITPNSMQGVREFVAEIESLGRLRHKNLVNLQGWCKHRND----LLLIYDYIPNGSLDSLLYSKPRRSGAVLSWNARFQIAKGIASGLLYLHEEWEQIVIHRDVKPSNVLIDSDMNPRL 507          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: CRK33_ARATH (Putative cysteine-rich receptor-like protein kinase 33 OS=Arabidopsis thaliana GN=CRK33 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.479e-14
Identity = 40/121 (33.06%), Postives = 73/121 (60.33%), Query Frame = 2
Query:    5 EATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            E  V RL+  S+QGV+EF N+ + +A LQH NL  +LGF      ++++L+YE + + SLD+ ++  +    +DW  R KI +  A+G+ +LH + P + ++ +   +NI +D +   K++
Sbjct:  345 EIAVKRLSKESAQGVQEFQNETSLVAKLQHRNLVGVLGFCME--GEEKILVYEFVPNKSLDQFLFEPTKKGQLDWAKRYKIIVGTARGILYLHHDSPLKIIHRDLKASNILLDAEMEPKVA 463          
The following BLAST results are available for this feature:
BLAST of CF504581 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
Y5343_ARATH1.113e-1435.71Probable LRR receptor-like serine/threonine-protei... [more]
Y5344_ARATH1.454e-1434.82Probable LRR receptor-like serine/threonine-protei... [more]
Y1677_ARATH1.454e-1436.28Probable LRR receptor-like serine/threonine-protei... [more]
LRKA2_ARATH1.454e-1436.07Lectin-domain containing receptor kinase A4.2 OS=A... [more]
CRK26_ARATH1.454e-1435.59Cysteine-rich receptor-like protein kinase 26 OS=A... [more]
PSKR1_DAUCA1.898e-1438.32Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR... [more]
CRK5_ARATH1.898e-1435.54Cysteine-rich receptor-like protein kinase 5 OS=Ar... [more]
CRK10_ARATH1.898e-1437.19Cysteine-rich receptor-like protein kinase 10 OS=A... [more]
LRKA3_ARATH2.479e-1436.29Lectin-domain containing receptor kinase A4.3 OS=A... [more]
CRK33_ARATH2.479e-1433.06Putative cysteine-rich receptor-like protein kinas... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-070 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-19_H11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504581 ID=CF504581; Name=CF504581; organism=Citrus sinensis; type=EST; length=366bp
GTTTGAAGCCACTGTTACTCGCCTTAATCCATCCAGCCAGGGTGTGAAGG
AATTTATAAATGATGTAAACACCCTTGCATCATTGCAACATCCAAATCTC
TGTAAATTGCTTGGTTTTCATGCACGTGATGGATCGGACCAGAGAATGTT
GATCTATGAGAGACTTTTTCATGGAAGCTTGGACCGTCTTATTTATGGGA
GATCAGATGGGCCTCCAATTGATTGGAACACCAGGGTAAAAATTGCATTA
TGTGCTGCACAAGGTCTTACCTTCTTGCATGAAGAAGGGCCTTTTCAGGC
AATGTACAATGAATTTTCAACTGCCAACATACAAATTGACAAAGATTTTA
GTGCGAAGCTTTCAGG
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