CF504581

Overview
NameCF504581
Unique NameCF504581
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length366
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13532 contig Csv1_Contig13532:86..451. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: Y5900_ARATH (Putative receptor-like protein kinase At5g39000 OS=Arabidopsis thaliana GN=At5g39000 PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.238e-14
Identity = 38/113 (33.63%), Postives = 69/113 (61.06%), Query Frame = 2
Query:   32 SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGR--SDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            S+QG KEF  ++  L+ L+H +L  L+G+   D  ++ +L+YE + HG+L   ++ R  +  PP+ W  R++I + AA+GL +LH    +  ++ +  T NI +D++F  K+S
Sbjct:  553 SNQGAKEFETELEMLSKLRHVHLVSLIGYCDED--NEMVLVYEYMPHGTLKDHLFRRDKTSDPPLSWKRRLEICIGAARGLQYLHTGAKYTIIHRDIKTTNILLDENFVTKVS 663          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: EXS_ARATH (Leucine-rich repeat receptor protein kinase EXS OS=Arabidopsis thaliana GN=EXS PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.238e-14
Identity = 40/111 (36.04%), Postives = 71/111 (63.96%), Query Frame = 2
Query:   35 SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPI-DWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            +QG +EF+ ++ TL  ++HPNL  LLG+ +   S++++L+YE + +GSLD  +  ++    + DW+ R+KIA+ AA+GL FLH       ++ +   +NI +D DF  K++
Sbjct:  952 TQGNREFMAEMETLGKVKHPNLVSLLGYCSF--SEEKLLVYEYMVNGSLDHWLRNQTGMLEVLDWSKRLKIAVGAARGLAFLHHGFIPHIIHRDIKASNILLDGDFEPKVA 1060          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: CRK25_ARATH (Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana GN=CRK25 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.238e-14
Identity = 40/111 (36.04%), Postives = 66/111 (59.46%), Query Frame = 2
Query:   32 SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            S+QG +EF N+V+ +A LQH NL KLLG+   DG ++++L+YE + + SLD  ++       +DW  R KI    A+G+ +LH +     ++ +   +NI +D D   K+S
Sbjct:  381 STQGAEEFKNEVDVVAKLQHRNLAKLLGY-CLDG-EEKILVYEFVPNKSLDYFLFDNEKRRVLDWQRRYKIIEGIARGILYLHRDSRLTIIHRDLKASNILLDADMHPKIS 489          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: PSKR1_ARATH (Phytosulfokine receptor 1 OS=Arabidopsis thaliana GN=PSKR1 PE=2 SV=4)

HSP 1 Score: 76.6406 bits (187), Expect = 4.229e-14
Identity = 42/107 (39.25%), Postives = 68/107 (63.55%), Query Frame = 2
Query:   47 KEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPI-DWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            +EF  +V TL+  QHPNL  L GF      + R+LIY  + +GSLD  ++ R+DGP +  W TR++IA  AA+GL +LHE      ++ +  ++NI +D++F++ L+
Sbjct:  773 REFEAEVETLSRAQHPNLVLLRGFCFY--KNDRLLIYSYMENGSLDYWLHERNDGPALLKWKTRLRIAQGAAKGLLYLHEGCDPHILHRDIKSSNILLDENFNSHLA 877          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: CRK40_ARATH (Cysteine-rich receptor-like protein kinase 40 OS=Arabidopsis thaliana GN=CRK40 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 4.229e-14
Identity = 44/121 (36.36%), Postives = 68/121 (56.20%), Query Frame = 2
Query:    5 EATVTRLNPSS-QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            E  V RL   S QG  EF N+V+ L  LQH NL KLLGF   +G D+ +L+YE + + SLD  I+       + W  R +I    A+GL +LHE+   + ++ +   +NI +D + + K++
Sbjct:  372 EVAVKRLTKGSGQGDMEFKNEVSLLTRLQHKNLVKLLGF-CNEG-DEEILVYEFVPNSSLDHFIFDEDKRSLLTWEVRFRIIEGIARGLLYLHEDSQLKIIHRDLKASNILLDAEMNPKVA 490          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: NORK_PEA (Nodulation receptor kinase OS=Pisum sativum GN=NORK PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 5.524e-14
Identity = 45/120 (37.50%), Postives = 71/120 (59.17%), Query Frame = 2
Query:    8 ATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPI-DWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            A   R   S+QG +EF N++N L+++QH NL  LLG+   +  DQ++L+Y  + +GSL   +YG      I DW TR+ IAL AA+GL +LH       ++ +  ++NI +D    AK++
Sbjct:  621 AVKVRSATSTQGTREFDNELNLLSAIQHENLVPLLGYC--NEYDQQILVYPFMSNGSLLDRLYGEPAKRKILDWPTRLSIALGAARGLAYLHTFPGRSVIHRDVKSSNILLDHSMCAKVA 738          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: CRK4_ARATH (Cysteine-rich receptor-like protein kinase 4 OS=Arabidopsis thaliana GN=CRK4 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 5.524e-14
Identity = 43/121 (35.54%), Postives = 70/121 (57.85%), Query Frame = 2
Query:    5 EATVTRLNPSS-QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            +  V RL+ +S QG +EF N+V  +A LQH NL +LLGF      D+R+L+YE + + SLD  I+  +    +DW  R KI    A+G+ +LH++     ++ +    NI +  D +AK++
Sbjct:  375 QVAVKRLSKTSGQGEREFANEVIVVAKLQHRNLVRLLGFCLE--RDERILVYEFVPNKSLDYFIFDSTMQSLLDWTRRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLGDDMNAKIA 493          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: CRK42_ARATH (Cysteine-rich receptor-like protein kinase 42 OS=Arabidopsis thaliana GN=CRK42 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 5.524e-14
Identity = 35/107 (32.71%), Postives = 64/107 (59.81%), Query Frame = 2
Query:   44 VKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            V+EF N+VN ++ +QH NL KLLG        + +L+YE + + SLD+ ++  S    ++W+ R+ I L  A+GL +LH   P + ++ +  T+N+ +D   + K++
Sbjct:  353 VEEFFNEVNLISGIQHKNLVKLLGCSIE--GPESLLVYEYVPNKSLDQFLFDESQSKVLNWSQRLNIILGTAEGLAYLHGGSPVRIIHRDIKTSNVLLDDQLNPKIA 457          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: BRL3_ARATH (Receptor-like protein kinase BRI1-like 3 OS=Arabidopsis thaliana GN=BRL3 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 5.524e-14
Identity = 39/113 (34.51%), Postives = 75/113 (66.37%), Query Frame = 2
Query:   32 SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSD--GPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            + QG +EF+ ++ T+  ++H NL  LLG+  + G ++R+L+YE + +GSL+ +++ ++   G  +DW+ R KIA+ AA+GL FLH       ++ +  ++N+ +D+DF A++S
Sbjct:  892 TGQGDREFMAEMETIGKIKHRNLVPLLGY-CKIG-EERLLVYEYMKYGSLETVLHEKTKKGGIFLDWSARKKIAIGAARGLAFLHHSCIPHIIHRDMKSSNVLLDQDFVARVS 1002          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: CRK22_ARATH (Cysteine-rich receptor-like protein kinase 22 OS=Arabidopsis thaliana GN=CRK22 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.214e-14
Identity = 43/121 (35.54%), Postives = 66/121 (54.55%), Query Frame = 2
Query:    5 EATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            E  V RL+  S Q  K+F N+   ++ +QH NL +LLGF  +   D + LIYE + + SLD  ++       +DW  R KI    AQG+  LH++     +Y +F  +NI +D D + K+S
Sbjct:  377 EVAVKRLSKVSGQDTKKFRNEAVLVSKIQHRNLARLLGFCLQ--GDGKFLIYEFVLNKSLDYFLFDPEKQGELDWTRRYKIIGGIAQGILHLHQDPQLTIIYRDFKASNILLDADMNPKIS 495          
The following BLAST results are available for this feature:
BLAST of CF504581 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
Y5900_ARATH3.238e-1433.63Putative receptor-like protein kinase At5g39000 OS... [more]
EXS_ARATH3.238e-1436.04Leucine-rich repeat receptor protein kinase EXS OS... [more]
CRK25_ARATH3.238e-1436.04Cysteine-rich receptor-like protein kinase 25 OS=A... [more]
PSKR1_ARATH4.229e-1439.25Phytosulfokine receptor 1 OS=Arabidopsis thaliana ... [more]
CRK40_ARATH4.229e-1436.36Cysteine-rich receptor-like protein kinase 40 OS=A... [more]
NORK_PEA5.524e-1437.50Nodulation receptor kinase OS=Pisum sativum GN=NOR... [more]
CRK4_ARATH5.524e-1435.54Cysteine-rich receptor-like protein kinase 4 OS=Ar... [more]
CRK42_ARATH5.524e-1432.71Cysteine-rich receptor-like protein kinase 42 OS=A... [more]
BRL3_ARATH5.524e-1434.51Receptor-like protein kinase BRI1-like 3 OS=Arabid... [more]
CRK22_ARATH7.214e-1435.54Cysteine-rich receptor-like protein kinase 22 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-070 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-19_H11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504581 ID=CF504581; Name=CF504581; organism=Citrus sinensis; type=EST; length=366bp
GTTTGAAGCCACTGTTACTCGCCTTAATCCATCCAGCCAGGGTGTGAAGG
AATTTATAAATGATGTAAACACCCTTGCATCATTGCAACATCCAAATCTC
TGTAAATTGCTTGGTTTTCATGCACGTGATGGATCGGACCAGAGAATGTT
GATCTATGAGAGACTTTTTCATGGAAGCTTGGACCGTCTTATTTATGGGA
GATCAGATGGGCCTCCAATTGATTGGAACACCAGGGTAAAAATTGCATTA
TGTGCTGCACAAGGTCTTACCTTCTTGCATGAAGAAGGGCCTTTTCAGGC
AATGTACAATGAATTTTCAACTGCCAACATACAAATTGACAAAGATTTTA
GTGCGAAGCTTTCAGG
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