CF504581

Overview
NameCF504581
Unique NameCF504581
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length366
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13532 contig Csv1_Contig13532:86..451. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: CRK2_ARATH (Cysteine-rich receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=CRK2 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.607e-13
Identity = 35/105 (33.33%), Postives = 62/105 (59.05%), Query Frame = 2
Query:   50 EFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            +F N+VN +++++H NL +LLG        + +L+YE L + SLDR I+  + G  +DW  R  I +  A+GL +LHE+   + ++ +   +NI +D    AK++
Sbjct:  365 DFYNEVNMISTVEHKNLVRLLGCSC--SGPESLLVYEYLQNKSLDRFIFDVNRGKTLDWQRRYTIIVGTAEGLVYLHEQSSVKIIHRDIKASNILLDSKLQAKIA 467          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: CRK20_ARATH (Putative cysteine-rich receptor-like protein kinase 20 OS=Arabidopsis thaliana GN=CRK20 PE=2 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 2.099e-13
Identity = 41/121 (33.88%), Postives = 71/121 (58.68%), Query Frame = 2
Query:    5 EATVTRLNPSS-QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            +  V RL+ +S QG KEF N+V  +A LQH NL KLLG+      ++++L+YE + + SLD  ++  +    +DW+ R KI    A+G+ +LH++     ++ +    NI +D D + K++
Sbjct:  368 QVAVKRLSKNSGQGEKEFENEVVVVAKLQHRNLVKLLGYCLE--GEEKILVYEFVPNKSLDYFLFDPTMQGQLDWSRRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLDADMNPKVA 486          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: Y5614_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana GN=At1g56140 PE=1 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 2.741e-13
Identity = 39/111 (35.14%), Postives = 66/111 (59.46%), Query Frame = 2
Query:   32 SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            S QG  +F+ ++  ++++QH NL KL G       + R+L+YE L +GSLD+ ++G      +DW+TR +I L  A+GL +LHEE   + ++ +   +NI +D     K+S
Sbjct:  727 SRQGKGQFVAEIVAISAVQHRNLVKLYGCCYE--GEHRLLVYEYLPNGSLDQALFGEKT-LHLDWSTRYEICLGVARGLVYLHEEARLRIVHRDVKASNILLDSKLVPKVS 834          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: Y5487_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g48740 OS=Arabidopsis thaliana GN=At5g48740 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.741e-13
Identity = 42/120 (35.00%), Postives = 71/120 (59.17%), Query Frame = 2
Query:    8 ATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYG-RSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            A   R + +  G   FIN+V+ L+ ++H NL    GF       +++L+YE L  GSL   +YG RS    ++W +R+K+A+ AA+GL +LH     + ++ +  ++NI +DKD +AK+S
Sbjct:  632 AVKVRFDRTQLGADSFINEVHLLSQIRHQNLVSFEGFCYEP--KRQILVYEYLSGGSLADHLYGPRSKRHSLNWVSRLKVAVDAAKGLDYLHNGSEPRIIHRDVKSSNILLDKDMNAKVS 749          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: THE1_ARATH (Receptor-like protein kinase THESEUS 1 OS=Arabidopsis thaliana GN=THE1 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.741e-13
Identity = 41/121 (33.88%), Postives = 71/121 (58.68%), Query Frame = 2
Query:    5 EATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            +  V R NP S QG+ EF  ++  L+ L+H +L  L+G+   D   + +L+YE + +G L   +YG +D PP+ W  R++I + AA+GL +LH       ++ +  T NI +D++  AK++
Sbjct:  534 KVAVKRGNPRSEQGMAEFRTEIEMLSKLRHRHLVSLIGYC--DERSEMILVYEYMANGPLRSHLYG-ADLPPLSWKQRLEICIGAARGLHYLHTGASQSIIHRDVKTTNILLDENLVAKVA 651          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: LRKA1_ARATH (Lectin-domain containing receptor kinase A4.1 OS=Arabidopsis thaliana GN=LECRKA4.1 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.741e-13
Identity = 45/121 (37.19%), Postives = 69/121 (57.02%), Query Frame = 2
Query:   14 VTRLNPSS-QGVKEFINDVNTLASLQHPNLCKLLGF--HARDGSDQRMLIYERLFHGSLDRLIYG--RSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKL 361
            V ++ PSS QGV+EF+ ++ +L  L+H NL  L G+  H  D     +LIY+ + +GSLD L+Y   R  G  + WN R +IA   A GL +LHEE     ++ +   +N+ ID   + +L
Sbjct:  394 VKKIIPSSRQGVREFVAEIESLGKLRHKNLVNLQGWCKHKND----LLLIYDYIPNGSLDSLLYTVPRRSGAVLSWNARFQIAKGIASGLLYLHEEWEKIVIHRDVKPSNVLIDSKMNPRL 510          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: CRK8_ARATH (Cysteine-rich receptor-like protein kinase 8 OS=Arabidopsis thaliana GN=CRK8 PE=2 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 2.741e-13
Identity = 41/121 (33.88%), Postives = 70/121 (57.85%), Query Frame = 2
Query:    5 EATVTRLNPSS-QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            E  V RL+ +S QG  EF  +V  +A LQH NL +LLGF  +   ++R+L+YE + + SLD L++  +    +DW  R  I    A+G+ +LH++     ++ +   +NI +D D + K++
Sbjct:  377 EVAVKRLSKNSRQGEAEFKTEVVVVAKLQHRNLVRLLGFSLQ--GEERILVYEYMPNKSLDCLLFDPTKQTQLDWMQRYNIIGGIARGILYLHQDSRLTIIHRDLKASNILLDADINPKIA 495          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: CRK31_ARATH (Putative cysteine-rich receptor-like protein kinase 31 OS=Arabidopsis thaliana GN=CRK31 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.741e-13
Identity = 41/121 (33.88%), Postives = 68/121 (56.20%), Query Frame = 2
Query:    5 EATVTRLNPSS-QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            E  V RL+ +S QG +EF N+V  +A LQH NL +LLGF      D+++L+YE + + SLD  ++       +DW  R  I     +GL +LH++     ++ +   +NI +D D + K++
Sbjct:  363 EIAVKRLSSNSGQGTQEFKNEVVIVAKLQHKNLVRLLGFCIE--RDEQILVYEFVSNKSLDYFLFDPKMKSQLDWKRRYNIIGGVTRGLLYLHQDSRLTIIHRDIKASNILLDADMNPKIA 481          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: BRL1_ARATH (Serine/threonine-protein kinase BRI1-like 1 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.741e-13
Identity = 39/114 (34.21%), Postives = 73/114 (64.04%), Query Frame = 2
Query:   32 SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSD---GPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            + QG +EF+ ++ T+  ++H NL  LLG+  + G ++R+L+YE +  GSL+ +++ +S    G  ++W  R KIA+ AA+GL FLH       ++ +  ++N+ +D+DF A++S
Sbjct:  893 TGQGDREFMAEMETIGKIKHRNLVPLLGY-CKVG-EERLLVYEYMKWGSLETVLHEKSSKKGGIYLNWAARKKIAIGAARGLAFLHHSCIPHIIHRDMKSSNVLLDEDFEARVS 1004          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: IRAK4_BOVIN (Interleukin-1 receptor-associated kinase 4 OS=Bos taurus GN=IRAK4 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.580e-13
Identity = 47/108 (43.52%), Postives = 68/108 (62.96%), Query Frame = 2
Query:   47 KEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSL-DRLIYGRSDG-PPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            ++F  ++  +A  QH NL +LLGF + DG D   L+Y  + +GSL DRL     DG PP+ WN R KIA  AA GL++LHE      ++ +  +ANI +D+DF+AK+S
Sbjct:  229 QQFDQEIKVMAKCQHENLVELLGFSS-DGDDL-CLVYVYMPNGSLLDRL--SCLDGTPPLSWNMRCKIAQGAANGLSYLHEN---HHIHRDIKSANILLDEDFTAKIS 329          
The following BLAST results are available for this feature:
BLAST of CF504581 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
CRK2_ARATH1.607e-1333.33Cysteine-rich receptor-like protein kinase 2 OS=Ar... [more]
CRK20_ARATH2.099e-1333.88Putative cysteine-rich receptor-like protein kinas... [more]
Y5614_ARATH2.741e-1335.14Probable LRR receptor-like serine/threonine-protei... [more]
Y5487_ARATH2.741e-1335.00Probable LRR receptor-like serine/threonine-protei... [more]
THE1_ARATH2.741e-1333.88Receptor-like protein kinase THESEUS 1 OS=Arabidop... [more]
LRKA1_ARATH2.741e-1337.19Lectin-domain containing receptor kinase A4.1 OS=A... [more]
CRK8_ARATH2.741e-1333.88Cysteine-rich receptor-like protein kinase 8 OS=Ar... [more]
CRK31_ARATH2.741e-1333.88Putative cysteine-rich receptor-like protein kinas... [more]
BRL1_ARATH2.741e-1334.21Serine/threonine-protein kinase BRI1-like 1 OS=Ara... [more]
IRAK4_BOVIN3.580e-1343.52Interleukin-1 receptor-associated kinase 4 OS=Bos ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-070 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-19_H11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504581 ID=CF504581; Name=CF504581; organism=Citrus sinensis; type=EST; length=366bp
GTTTGAAGCCACTGTTACTCGCCTTAATCCATCCAGCCAGGGTGTGAAGG
AATTTATAAATGATGTAAACACCCTTGCATCATTGCAACATCCAAATCTC
TGTAAATTGCTTGGTTTTCATGCACGTGATGGATCGGACCAGAGAATGTT
GATCTATGAGAGACTTTTTCATGGAAGCTTGGACCGTCTTATTTATGGGA
GATCAGATGGGCCTCCAATTGATTGGAACACCAGGGTAAAAATTGCATTA
TGTGCTGCACAAGGTCTTACCTTCTTGCATGAAGAAGGGCCTTTTCAGGC
AATGTACAATGAATTTTCAACTGCCAACATACAAATTGACAAAGATTTTA
GTGCGAAGCTTTCAGG
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