CF504581

Overview
NameCF504581
Unique NameCF504581
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length366
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13532 contig Csv1_Contig13532:86..451. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: CRK37_ARATH (Cysteine-rich receptor-like protein kinase 37 OS=Arabidopsis thaliana GN=CRK37 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.580e-13
Identity = 43/121 (35.54%), Postives = 66/121 (54.55%), Query Frame = 2
Query:    5 EATVTRLNPSS-QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            E  V RL   S QG  EF N+V  L  LQH NL KLLGF   +  D+ +L+YE + + SLD  I+       + W+ R  I    A+GL +LHE+   + ++ +   +NI +D + + K++
Sbjct:  369 EIAVKRLRKGSGQGGMEFKNEVLLLTRLQHRNLVKLLGFC--NEKDEEILVYEFVPNSSLDHFIFDEEKRRVLTWDVRYTIIEGVARGLLYLHEDSQLRIIHRDLKASNILLDAEMNPKVA 487          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: CRK36_ARATH (Cysteine-rich receptor-like protein kinase 36 OS=Arabidopsis thaliana GN=CRK36 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.580e-13
Identity = 43/121 (35.54%), Postives = 69/121 (57.02%), Query Frame = 2
Query:    5 EATVTRL-NPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            E  V RL   S QG  EF N+V  L  LQH NL KLLGF   +G+++ +L+YE + + SLD  I+       + W+ R +I    A+GL +LHE+   + ++ +   +NI +D + + K++
Sbjct:  364 EIAVKRLAGGSGQGELEFKNEVLLLTRLQHRNLVKLLGF-CNEGNEE-ILVYEHVPNSSLDHFIFDEDKRWLLTWDVRYRIIEGVARGLLYLHEDSQLRIIHRDLKASNILLDAEMNPKVA 482          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: PAM74_ARATH (Probable LRR receptor-like serine/threonine-protein kinase PAM74 OS=Arabidopsis thaliana GN=PAM74 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.676e-13
Identity = 44/111 (39.64%), Postives = 62/111 (55.86%), Query Frame = 2
Query:   32 SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            SSQG K F  +V+ L  + H NL  L+G+   D  D   LIYE L  G L + + G+S G  I+W  R++IAL AA GL +LH       ++ +  T NI +D+   AKL+
Sbjct:  613 SSQGYKHFKAEVDLLLRVHHTNLVSLVGYC--DERDHLALIYEFLPKGDLRQHLSGKSGGSFINWGNRLRIALEAALGLEYLHSGCTPPIVHRDIKTTNILLDEQLKAKLA 721          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: MEE39_ARATH (Probable LRR receptor-like serine/threonine-protein kinase MEE39 OS=Arabidopsis thaliana GN=MEE39 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.676e-13
Identity = 40/111 (36.04%), Postives = 65/111 (58.56%), Query Frame = 2
Query:   32 SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            S+QG KEF  +V  L  + H NL  L+G+   D  D   LIYE + +G L + + G+  G  ++W TR++IA+ AA GL +LH       ++ +  + NI +D++F AK++
Sbjct:  600 SAQGYKEFKAEVELLLRVHHINLVNLVGYC--DEQDHFALIYEYMSNGDLHQHLSGKHGGSVLNWGTRLQIAIEAALGLEYLHTGCKPAMVHRDVKSTNILLDEEFKAKIA 708          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: CRK6_ARATH (Cysteine-rich receptor-like protein kinase 6 OS=Arabidopsis thaliana GN=CRK6 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.676e-13
Identity = 41/121 (33.88%), Postives = 70/121 (57.85%), Query Frame = 2
Query:    5 EATVTRLNPSS-QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            E  V RL+ +S QG  EF  +V  +A LQH NL +LLGF  +   ++R+L+YE + + SLD L++  +    +DW  R  I    A+G+ +LH++     ++ +   +NI +D D + K++
Sbjct:  375 EVAVKRLSKNSRQGEAEFKTEVVVVAKLQHRNLVRLLGFSLQ--GEERILVYEYMPNKSLDCLLFDPTKQIQLDWMQRYNIIGGIARGILYLHQDSRLTIIHRDLKASNILLDADINPKIA 493          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: CRK23_ARATH (Putative cysteine-rich receptor-like protein kinase 23 OS=Arabidopsis thaliana GN=CRK23 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.676e-13
Identity = 39/121 (32.23%), Postives = 70/121 (57.85%), Query Frame = 2
Query:    5 EATVTRLNPSS-QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            +  V RL+ +S QG +EF N+V  +A LQH NL +LLG+      ++++L+YE + + SLD  ++  +    +DW  R KI    A+G+ +LH++     ++ +    NI +D D + K++
Sbjct:  532 QVAVKRLSKTSGQGEREFENEVVVVAKLQHRNLVRLLGYCLE--GEEKILVYEFVHNKSLDYFLFDTTMKRQLDWTRRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLDADMNPKVA 650          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: BRL2_ARATH (Serine/threonine-protein kinase BRI1-like 2 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.676e-13
Identity = 40/114 (35.09%), Postives = 70/114 (61.40%), Query Frame = 2
Query:   32 SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPP---IDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            S QG +EF+ ++ TL  ++H NL  LLG+  + G ++R+L+YE + +GSL+ +++G   G     + W  R KIA  AA+GL FLH       ++ +  ++N+ +D+D  A++S
Sbjct:  872 SCQGDREFMAEMETLGKIKHRNLVPLLGY-CKIG-EERLLVYEFMQYGSLEEVLHGPRTGEKRRILGWEERKKIAKGAAKGLCFLHHNCIPHIIHRDMKSSNVLLDQDMEARVS 983          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: ERECT_ARATH (LRR receptor-like serine/threonine-protein kinase ERECTA OS=Arabidopsis thaliana GN=ERECTA PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.107e-13
Identity = 40/110 (36.36%), Postives = 68/110 (61.82%), Query Frame = 2
Query:   38 QGVKEFINDVNTLASLQHPNLCKLLGFHARD-GSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            Q +K+F  ++  L+S++H NL  L  +     GS   +L Y+ L +GSL  L++G +    +DW+TR+KIA  AAQGL +LH +   + ++ +  ++NI +DKD  A+L+
Sbjct:  684 QSMKQFETELEMLSSIKHRNLVSLQAYSLSHLGS---LLFYDYLENGSLWDLLHGPTKKKTLDWDTRLKIAYGAAQGLAYLHHDCSPRIIHRDVKSSNILLDKDLEARLT 790          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: CRK11_ARATH (Cysteine-rich receptor-like protein kinase 11 OS=Arabidopsis thaliana GN=CRK11 PE=2 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 6.107e-13
Identity = 39/121 (32.23%), Postives = 68/121 (56.20%), Query Frame = 2
Query:    5 EATVTRLNPSS-QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            +  V RL+  S QG +EF N+   +  LQH NL +LLGF      ++++LIYE + + SLD  ++       +DW  R KI    A+G+ +LH++   + ++ +   +NI +D D + K++
Sbjct:  374 DVAVKRLSKKSGQGTREFRNEAVLVTKLQHRNLVRLLGFCLE--REEQILIYEFVHNKSLDYFLFDPEKQSQLDWTRRYKIIGGIARGILYLHQDSRLKIIHRDLKASNILLDADMNPKIA 492          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: PUB33_ARATH (U-box domain-containing protein 33 OS=Arabidopsis thaliana GN=PUB33 PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 7.976e-13
Identity = 41/121 (33.88%), Postives = 64/121 (52.89%), Query Frame = 2
Query:    5 EATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            +  +  LNP SSQG  E+  +V+ L+ ++HPN+  L+G      S    L+YE L  GSL+  +  + + PP+ W  RV+IA      L FLH       ++ +   ANI +D +  +KLS
Sbjct:  504 QVAIKMLNPNSSQGPVEYQQEVDVLSKMRHPNIITLIGACPEGWS----LVYEYLPGGSLEDRLTCKDNSPPLSWQNRVRIATEICAALVFLHSNKAHSLVHGDLKPANILLDSNLVSKLS 620          
The following BLAST results are available for this feature:
BLAST of CF504581 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
CRK37_ARATH3.580e-1335.54Cysteine-rich receptor-like protein kinase 37 OS=A... [more]
CRK36_ARATH3.580e-1335.54Cysteine-rich receptor-like protein kinase 36 OS=A... [more]
PAM74_ARATH4.676e-1339.64Probable LRR receptor-like serine/threonine-protei... [more]
MEE39_ARATH4.676e-1336.04Probable LRR receptor-like serine/threonine-protei... [more]
CRK6_ARATH4.676e-1333.88Cysteine-rich receptor-like protein kinase 6 OS=Ar... [more]
CRK23_ARATH4.676e-1332.23Putative cysteine-rich receptor-like protein kinas... [more]
BRL2_ARATH4.676e-1335.09Serine/threonine-protein kinase BRI1-like 2 OS=Ara... [more]
ERECT_ARATH6.107e-1336.36LRR receptor-like serine/threonine-protein kinase ... [more]
CRK11_ARATH6.107e-1332.23Cysteine-rich receptor-like protein kinase 11 OS=A... [more]
PUB33_ARATH7.976e-1333.88U-box domain-containing protein 33 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-070 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-19_H11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504581 ID=CF504581; Name=CF504581; organism=Citrus sinensis; type=EST; length=366bp
GTTTGAAGCCACTGTTACTCGCCTTAATCCATCCAGCCAGGGTGTGAAGG
AATTTATAAATGATGTAAACACCCTTGCATCATTGCAACATCCAAATCTC
TGTAAATTGCTTGGTTTTCATGCACGTGATGGATCGGACCAGAGAATGTT
GATCTATGAGAGACTTTTTCATGGAAGCTTGGACCGTCTTATTTATGGGA
GATCAGATGGGCCTCCAATTGATTGGAACACCAGGGTAAAAATTGCATTA
TGTGCTGCACAAGGTCTTACCTTCTTGCATGAAGAAGGGCCTTTTCAGGC
AATGTACAATGAATTTTCAACTGCCAACATACAAATTGACAAAGATTTTA
GTGCGAAGCTTTCAGG
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