CF504581

Overview
NameCF504581
Unique NameCF504581
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length366
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13532 contig Csv1_Contig13532:86..451. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: Y1154_ARATH (Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana GN=At1g01540 PE=1 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 1.361e-12
Identity = 39/115 (33.91%), Postives = 69/115 (60.00%), Query Frame = 2
Query:   23 LNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGR-SDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            LN   Q  KEF  +V  +  ++H NL +LLG+        RML+Y+ + +G+L++ I+G   D  P+ W+ R+ I L  A+GL +LHE    + ++ +  ++NI +D+ ++AK+S
Sbjct:  185 LNNRGQAEKEFKVEVEVIGRVRHKNLVRLLGYCVEGA--YRMLVYDFVDNGNLEQWIHGDVGDVSPLTWDIRMNIILGMAKGLAYLHEGLEPKVVHRDIKSSNILLDRQWNAKVS 297          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: Y1561_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thaliana GN=At1g56130 PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 1.777e-12
Identity = 39/111 (35.14%), Postives = 65/111 (58.56%), Query Frame = 2
Query:   32 SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            S QG  +F+ ++  ++S+ H NL KL G       + RML+YE L +GSLD+ ++G      +DW+TR +I L  A+GL +LHEE   + ++ +   +NI +D     ++S
Sbjct:  728 SRQGKGQFVAEIVAISSVLHRNLVKLYGCCFE--GEHRMLVYEYLPNGSLDQALFGDKT-LHLDWSTRYEICLGVARGLVYLHEEASVRIVHRDVKASNILLDSRLVPQIS 835          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: RPK2_ARATH (LRR receptor-like serine/threonine-protein kinase RPK2 OS=Arabidopsis thaliana GN=RPK2 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.777e-12
Identity = 40/109 (36.70%), Postives = 64/109 (58.72%), Query Frame = 2
Query:   38 QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            QGV++F  ++ TL  L+HPNL  L+G+HA +   +  L+Y  L  G+L++ I  RS     DW    KIAL  A+ L +LH++   + ++ +   +NI +D D +A LS
Sbjct:  910 QGVQQFHAEIKTLGRLRHPNLVTLIGYHASE--TEMFLVYNYLPGGNLEKFIQERSTR---DWRVLHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDCNAYLS 1013          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: ERL2_ARATH (LRR receptor-like serine/threonine-protein kinase ERL2 OS=Arabidopsis thaliana GN=ERL2 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.777e-12
Identity = 37/113 (32.74%), Postives = 66/113 (58.41%), Query Frame = 2
Query:   26 NPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            N      +EF  ++ T+ S++H N+  L G+      +  +L Y+ + +GSL  L++G      +DW TR+KIA+ AAQGL +LH +   + ++ +  ++NI +D +F A+LS
Sbjct:  683 NQYPSNFREFETELETIGSIRHRNIVSLHGYALSPFGN--LLFYDYMENGSLWDLLHGPGKKVKLDWETRLKIAVGAAQGLAYLHHDCTPRIIHRDIKSSNILLDGNFEARLS 793          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: CRK35_ARATH (Putative cysteine-rich receptor-like protein kinase 35 OS=Arabidopsis thaliana GN=CRK35 PE=3 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 1.777e-12
Identity = 38/121 (31.40%), Postives = 69/121 (57.02%), Query Frame = 2
Query:    5 EATVTRLNPSS-QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            E  V RL+ +S QG +EF N+   ++ LQH NL +LLGF      ++++L+YE + + SLD  ++  +    +DW  R  I    A+G+ +LH++     ++ +   +NI +D D + K++
Sbjct:  369 EVAVKRLSKTSGQGAEEFKNEAVLVSKLQHKNLVRLLGFCLE--GEEKILVYEFVPNKSLDYFLFDPAKQGELDWTRRYNIIGGIARGILYLHQDSRLTIIHRDLKASNILLDADMNPKIA 487          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: CRK17_ARATH (Cysteine-rich receptor-like protein kinase 17 OS=Arabidopsis thaliana GN=CRK17 PE=2 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 1.777e-12
Identity = 39/121 (32.23%), Postives = 70/121 (57.85%), Query Frame = 2
Query:    5 EATVTRLNPSS-QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            E  V RL+ +S QG  EF N+V  +A LQH NL +LLGF  +   ++++L+YE + + SLD  ++  +    +DW  R  I     +G+ +LH++   + ++ +   +NI +D D + K++
Sbjct:  383 EIAVKRLSKTSGQGEIEFKNEVVVVAKLQHINLVRLLGFSLQ--GEEKLLVYEFVPNKSLDYFLFDPNKRNQLDWTVRRNIIGGITRGILYLHQDSRLKIIHRDLKASNILLDADMNPKIA 501          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: CRK13_ARATH (Cysteine-rich receptor-like protein kinase 13 OS=Arabidopsis thaliana GN=CRK13 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.777e-12
Identity = 39/121 (32.23%), Postives = 69/121 (57.02%), Query Frame = 2
Query:    5 EATVTRLNPSS-QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            E  V RL+  + Q  KEF N+V  +A LQH NL +LLGF  +   ++++++YE L + SLD +++  +    +DW  R KI    A+G+ +LH++     ++ +    NI +D   + K++
Sbjct:  382 EIAVKRLSEKTEQSKKEFKNEVVLVAKLQHRNLVRLLGFSVK--GEEKIIVYEYLPNRSLDYILFDPTKQGELDWKKRYKIIGGTARGILYLHQDSQPTIIHRDLKAGNILLDAHMNPKVA 500          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: HERK_ARATH (Receptor-like protein kinase HERK 1 OS=Arabidopsis thaliana GN=HERK1 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.321e-12
Identity = 40/121 (33.06%), Postives = 73/121 (60.33%), Query Frame = 2
Query:    5 EATVTRLNPSSQ-GVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            +  V R NP SQ G+ EF  ++  L+  +H +L  L+G+   D +++ +LIYE + +G++   +YG S  P + W  R++I + AA+GL +LH       ++ +  +ANI +D++F AK++
Sbjct:  509 KVAVKRGNPKSQQGLAEFRTEIEMLSQFRHRHLVSLIGYC--DENNEMILIYEYMENGTVKSHLYG-SGLPSLTWKQRLEICIGAARGLHYLHTGDSKPVIHRDVKSANILLDENFMAKVA 626          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: Y2706_ARATH (Probable receptor-like protein kinase At2g47060 OS=Arabidopsis thaliana GN=At2g47060 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.031e-12
Identity = 41/125 (32.80%), Postives = 74/125 (59.20%), Query Frame = 2
Query:    8 ATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSD------GPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            + + +L+ + Q   EF+  V+ ++ L+H N  +LLG+   DG+  R+L YE   +GSL  +++GR        GP + W  RVKIA+ AA+GL +LHE+     ++ +  ++N+ + +D  AK++
Sbjct:   98 SAIKKLDSNKQPDNEFLAQVSMVSRLKHDNFVQLLGYCV-DGNS-RILSYEFANNGSLHDILHGRKGVKGAQPGPVLSWYQRVKIAVGAARGLEYLHEKANPHIIHRDIKSSNVLLFEDDVAKIA 220          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: Y2289_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g28960 OS=Arabidopsis thaliana GN=At2g28960 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.031e-12
Identity = 40/111 (36.04%), Postives = 60/111 (54.05%), Query Frame = 2
Query:   32 SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            S QG KEF  +V  L  + H NL  L+G+   D      L+YE   +G L + + G   G P+ W++R+KI +  AQGL +LH       ++ +  T NI +D+ F AKL+
Sbjct:  607 SVQGYKEFKAEVELLLRVHHVNLVSLVGYC--DEESNLALLYEYAPNGDLKQHLSGERGGSPLKWSSRLKIVVETAQGLEYLHTGCKPPMVHRDVKTTNILLDEHFQAKLA 715          
The following BLAST results are available for this feature:
BLAST of CF504581 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
Y1154_ARATH1.361e-1233.91Probable serine/threonine-protein kinase At1g01540... [more]
Y1561_ARATH1.777e-1235.14Probable LRR receptor-like serine/threonine-protei... [more]
RPK2_ARATH1.777e-1236.70LRR receptor-like serine/threonine-protein kinase ... [more]
ERL2_ARATH1.777e-1232.74LRR receptor-like serine/threonine-protein kinase ... [more]
CRK35_ARATH1.777e-1231.40Putative cysteine-rich receptor-like protein kinas... [more]
CRK17_ARATH1.777e-1232.23Cysteine-rich receptor-like protein kinase 17 OS=A... [more]
CRK13_ARATH1.777e-1232.23Cysteine-rich receptor-like protein kinase 13 OS=A... [more]
HERK_ARATH2.321e-1233.06Receptor-like protein kinase HERK 1 OS=Arabidopsis... [more]
Y2706_ARATH3.031e-1232.80Probable receptor-like protein kinase At2g47060 OS... [more]
Y2289_ARATH3.031e-1236.04Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-070 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-19_H11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504581 ID=CF504581; Name=CF504581; organism=Citrus sinensis; type=EST; length=366bp
GTTTGAAGCCACTGTTACTCGCCTTAATCCATCCAGCCAGGGTGTGAAGG
AATTTATAAATGATGTAAACACCCTTGCATCATTGCAACATCCAAATCTC
TGTAAATTGCTTGGTTTTCATGCACGTGATGGATCGGACCAGAGAATGTT
GATCTATGAGAGACTTTTTCATGGAAGCTTGGACCGTCTTATTTATGGGA
GATCAGATGGGCCTCCAATTGATTGGAACACCAGGGTAAAAATTGCATTA
TGTGCTGCACAAGGTCTTACCTTCTTGCATGAAGAAGGGCCTTTTCAGGC
AATGTACAATGAATTTTCAACTGCCAACATACAAATTGACAAAGATTTTA
GTGCGAAGCTTTCAGG
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