CF504581

Overview
NameCF504581
Unique NameCF504581
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length366
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13532 contig Csv1_Contig13532:86..451. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: Y1684_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana GN=At1g06840 PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 3.031e-12
Identity = 40/111 (36.04%), Postives = 67/111 (60.36%), Query Frame = 2
Query:   32 SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            S QG KEF+ ++  L+ L H NL  LLGF   +G  ++ML+YE + +G+L   I  +    P+D+  R++IAL +A+G+ +LH E      + +   +NI +D  F+AK++
Sbjct:  659 SLQGEKEFLTEIELLSRLHHRNLVSLLGFCDEEG--EQMLVYEYMENGTLRDNISVKLK-EPLDFAMRLRIALGSAKGILYLHTEANPPIFHRDIKASNILLDSRFTAKVA 766          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: Y1357_ARATH (Probable receptor-like protein kinase At1g30570 OS=Arabidopsis thaliana GN=At1g30570 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.031e-12
Identity = 39/118 (33.05%), Postives = 71/118 (60.17%), Query Frame = 2
Query:   14 VTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            + R  P S QG+ EF  ++  L+ L+H +L  L+GF   D  ++ +L+YE + +G+L   ++G S+ PP+ W  R++  + +A+GL +LH       ++ +  T NI +D++F AK+S
Sbjct:  547 IKRATPHSQQGLAEFETEIVMLSRLRHRHLVSLIGFC--DEHNEMILVYEYMANGTLRSHLFG-SNLPPLSWKQRLEACIGSARGLHYLHTGSERGIIHRDVKTTNILLDENFVAKMS 661          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: SRF8_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana GN=SRF8 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.031e-12
Identity = 39/112 (34.82%), Postives = 64/112 (57.14%), Query Frame = 2
Query:   32 SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSD-GPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            S Q    F+  V+ ++ L+HPN+  L G+    G  QR+L+YE + +G+LD  ++   D    + WN RVK+AL  A+ L +LHE      ++  F +ANI +D++ +  LS
Sbjct:  431 SLQEEDNFLEAVSNMSRLRHPNIVPLAGYCTEHG--QRLLVYEYVGNGNLDDTLHTNDDRSMNLTWNARVKVALGTAKALEYLHEVCLPSIVHRNFKSANILLDEELNPHLS 540          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: SRF4_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 4 OS=Arabidopsis thaliana GN=SRF4 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.031e-12
Identity = 35/107 (32.71%), Postives = 65/107 (60.75%), Query Frame = 2
Query:   47 KEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSD-GPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            +EF + V++++S+ H N+ +L+G+ +  G  + ML+YE    GSL R ++   D   P+ WNTR++IAL  A+ + +LHE      ++    ++NI +D + + +LS
Sbjct:  456 EEFSHIVSSISSIHHKNMAELVGYCSEQG--RNMLVYEYFTSGSLHRFLHLSDDFSKPLTWNTRIRIALGTAKAIEYLHETCSPPLVHKNIKSSNILLDNELNPRLS 560          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: PTI1_SOLLC (Pto-interacting protein 1 OS=Solanum lycopersicum GN=PTI1 PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 3.031e-12
Identity = 42/125 (33.60%), Postives = 72/125 (57.60%), Query Frame = 2
Query:    8 ATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSD------GPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            A + +L+ S Q  +EF+  V+ ++ L+  N+ +LLG+    G   R+L YE   +GSL  +++GR        GP + W  RVKIA+ AA+GL +LHE+     ++ +  ++NI +  D  AK++
Sbjct:   93 AAIKKLDSSKQPDREFLAQVSMVSRLKDENVVELLGYCVDGGF--RVLAYEYAPNGSLHDILHGRKGVKGAQPGPVLSWAQRVKIAVGAAKGLEYLHEKAQPHIIHRDIKSSNILLFDDDVAKIA 215          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: CRK12_ARATH (Putative cysteine-rich receptor-like protein kinase 12 OS=Arabidopsis thaliana GN=CRK12 PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 3.031e-12
Identity = 39/121 (32.23%), Postives = 68/121 (56.20%), Query Frame = 2
Query:    5 EATVTRLNPSS-QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            E  V RL+ +S QG +EF N+V  +A LQH NL KLLG+      ++++L+YE + + SLD  ++  +    +DW  R  I     +G+ +LH++     ++ +   +NI +D D   K++
Sbjct:  391 EVAVKRLSKTSEQGAQEFKNEVVLVAKLQHRNLVKLLGYCLEP--EEKILVYEFVPNKSLDYFLFDPTKQGQLDWTKRYNIIGGITRGILYLHQDSRLTIIHRDLKASNILLDADMIPKIA 509          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: CRI4_MAIZE (Putative receptor protein kinase CRINKLY4 OS=Zea mays GN=CR4 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.031e-12
Identity = 39/108 (36.11%), Postives = 69/108 (63.89%), Query Frame = 2
Query:   47 KEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDG--PPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            KEF N+++ L+ L H +L  LLG+   DGS+ R+L+YE + HGSL + ++G+       ++W  RV IA+ AA+G+ +LH       ++ +  ++NI ID+D +A+++
Sbjct:  546 KEFHNELDLLSRLNHAHLLNLLGY-CEDGSE-RLLVYEFMAHGSLYQHLHGKDPNLKKRLNWARRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEDHNARVA 651          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: ANX1_ARATH (Receptor-like protein kinase ANXUR1 OS=Arabidopsis thaliana GN=ANX1 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.031e-12
Identity = 38/121 (31.40%), Postives = 70/121 (57.85%), Query Frame = 2
Query:    5 EATVTRLNPSS-QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            +  V + NP+S QG+ EF  ++  L+ L+H +L  L+G+    G  +  L+Y+ +  G+L   +Y     P + W  R++IA+ AA+GL +LH    +  ++ +  T NI +D+++ AK+S
Sbjct:  541 KVAVKKSNPNSEQGLNEFETEIELLSRLRHKHLVSLIGYCDEGG--EMCLVYDYMAFGTLREHLYNTKK-PQLTWKRRLEIAIGAARGLHYLHTGAKYTIIHRDVKTTNILVDENWVAKVS 658          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: Y5457_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana GN=At5g45780 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 3.958e-12
Identity = 40/111 (36.04%), Postives = 63/111 (56.76%), Query Frame = 2
Query:   26 NPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSL-DRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSA 355
            +P   G  +F  +V  +    H NL +L GF      ++RML+Y  + +GS+ DRL     + P +DWN R+ IAL AA+GL +LHE+   + ++ +   ANI +D+ F A
Sbjct:  332 DPIYTGEVQFQTEVEMIGLAVHRNLLRLFGFCMTP--EERMLVYPYMPNGSVADRLRDNYGEKPSLDWNRRISIALGAARGLVYLHEQCNPKIIHRDVKAANILLDESFEA 440          
BLAST of CF504581 vs. ExPASy Swiss-Prot
Match: Y5188_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51880 OS=Arabidopsis thaliana GN=At1g51880 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 3.958e-12
Identity = 40/111 (36.04%), Postives = 62/111 (55.86%), Query Frame = 2
Query:   32 SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLS 364
            S+QG KEF  +V  L  + H NL  L+G+   D  D   LIYE + +G L   + G+  G  + W  R++IA+ AAQGL +LH       ++ +  T NI +++ + AKL+
Sbjct:  599 SAQGYKEFKAEVELLLRVHHRNLVGLVGYC--DDGDNLALIYEYMANGDLKENMSGKRGGNVLTWENRMQIAVEAAQGLEYLHNGCTPPMVHRDVKTTNILLNERYGAKLA 707          
The following BLAST results are available for this feature:
BLAST of CF504581 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
Y1684_ARATH3.031e-1236.04Probable LRR receptor-like serine/threonine-protei... [more]
Y1357_ARATH3.031e-1233.05Probable receptor-like protein kinase At1g30570 OS... [more]
SRF8_ARATH3.031e-1234.82Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsi... [more]
SRF4_ARATH3.031e-1232.71Protein STRUBBELIG-RECEPTOR FAMILY 4 OS=Arabidopsi... [more]
PTI1_SOLLC3.031e-1233.60Pto-interacting protein 1 OS=Solanum lycopersicum ... [more]
CRK12_ARATH3.031e-1232.23Putative cysteine-rich receptor-like protein kinas... [more]
CRI4_MAIZE3.031e-1236.11Putative receptor protein kinase CRINKLY4 OS=Zea m... [more]
ANX1_ARATH3.031e-1231.40Receptor-like protein kinase ANXUR1 OS=Arabidopsis... [more]
Y5457_ARATH3.958e-1236.04Probable LRR receptor-like serine/threonine-protei... [more]
Y5188_ARATH3.958e-1236.04Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-070 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-19_H11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504581 ID=CF504581; Name=CF504581; organism=Citrus sinensis; type=EST; length=366bp
GTTTGAAGCCACTGTTACTCGCCTTAATCCATCCAGCCAGGGTGTGAAGG
AATTTATAAATGATGTAAACACCCTTGCATCATTGCAACATCCAAATCTC
TGTAAATTGCTTGGTTTTCATGCACGTGATGGATCGGACCAGAGAATGTT
GATCTATGAGAGACTTTTTCATGGAAGCTTGGACCGTCTTATTTATGGGA
GATCAGATGGGCCTCCAATTGATTGGAACACCAGGGTAAAAATTGCATTA
TGTGCTGCACAAGGTCTTACCTTCTTGCATGAAGAAGGGCCTTTTCAGGC
AATGTACAATGAATTTTCAACTGCCAACATACAAATTGACAAAGATTTTA
GTGCGAAGCTTTCAGG
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