CF504582

Overview
NameCF504582
Unique NameCF504582
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length309
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF504582 vs. ExPASy Swiss-Prot
Match: ARGD_NEIMA (Acetylornithine aminotransferase OS=Neisseria meningitidis serogroup A GN=argD PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 4.229e-14
Identity = 39/69 (56.52%), Postives = 50/69 (72.46%), Query Frame = 3 
Query:  102 EGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTG 308
            EGREY+D S GIAVNALGH     + A+  Q + L H+SN+Y + P  ELA++LVA SFAD+VFF N+G
Sbjct:   28 EGREYIDFSGGIAVNALGHCHPALVDALNAQMHKLWHISNIYTTRPAQELAQKLVANSFADKVFFCNSG 96
[Close]
BLAST of CF504582 vs. ExPASy Swiss-Prot
Match: ARGD_DICDI (Probable acetylornithine aminotransferase, mitochondrial OS=Dictyostelium discoideum GN=argD PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.213e-14
Identity = 35/70 (50.00%), Postives = 52/70 (74.29%), Query Frame = 3 
Query:  102 EGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACS-FADRVFFSNTG 308
            +G +YLD  +GIAVNALGH +  W + V +Q+  LTH+SN+YY+ P IELA+ ++A +   D+VFF+N+G
Sbjct:   82 KGDKYLDFGAGIAVNALGHSNDGWSEVVANQSKKLTHLSNLYYNQPAIELAQSMIASTPIFDKVFFANSG 151
[Close]
BLAST of CF504582 vs. ExPASy Swiss-Prot
Match: ARGD_PSEPK (Acetylornithine aminotransferase OS=Pseudomonas putida (strain KT2440) GN=argD PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 9.421e-14
Identity = 36/68 (52.94%), Postives = 48/68 (70.59%), Query Frame = 3 
Query:  105 GREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTG 308
            GRE +D + GIAVNALGH     +KA+ +QAN L HVSN++ + P + LA +LV  +FADR FF N+G
Sbjct:   41 GRELIDFAGGIAVNALGHCHPALVKALTEQANTLWHVSNVFTNEPALRLAHKLVDATFADRAFFCNSG 108
[Close]
BLAST of CF504582 vs. ExPASy Swiss-Prot
Match: ARGD_NEIMB (Acetylornithine aminotransferase OS=Neisseria meningitidis serogroup B GN=argD PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.230e-13
Identity = 38/69 (55.07%), Postives = 50/69 (72.46%), Query Frame = 3 
Query:  102 EGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTG 308
            +GREY+D S GIAVNALGH     + A+  Q + L H+SN+Y + P  ELA++LVA SFAD+VFF N+G
Sbjct:   28 KGREYIDFSGGIAVNALGHCHPALVDALNAQMHKLWHISNIYTTRPAQELAQKLVANSFADKVFFCNSG 96
[Close]
BLAST of CF504582 vs. ExPASy Swiss-Prot
Match: ARGD_SYNY3 (Acetylornithine aminotransferase OS=Synechocystis sp. (strain PCC 6803) GN=argD PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.568e-13
Identity = 37/69 (53.62%), Postives = 44/69 (63.77%), Query Frame = 3 
Query:  102 EGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTG 308
            EG+ YLD  +GIA   LGH     ++AV DQ   L HVSN+YY   Q ELAK +V  S ADRVFF N+G
Sbjct:   58 EGKSYLDFVAGIATCTLGHAHPALVRAVSDQIQKLHHVSNLYYIPEQGELAKWIVEHSCADRVFFCNSG 126

HSP 2 Score: 25.7942 bits (55), Expect = 1.568e-13
Identity = 9/22 (40.91%), Postives = 15/22 (68.18%), Query Frame = 2 
Query:   32 LVGTYNRAPVVLASGKGCKLYD 97
            ++ TY R P+ +A G+G  L+D
Sbjct:   35 VMNTYGRFPIAIARGQGSTLWD 56
[Close]
BLAST of CF504582 vs. ExPASy Swiss-Prot
Match: ASTC_ECO55 (Succinylornithine transaminase OS=Escherichia coli (strain 55989 / EAEC) GN=astC PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.440e-13
Identity = 33/69 (47.83%), Postives = 48/69 (69.57%), Query Frame = 3 
Query:  102 EGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTG 308
            +G+EY+D + GIAVNALGH   +  +A+ +QA+   H  N Y + P + LAK+L+  +FADRVFF N+G
Sbjct:   37 QGKEYIDFAGGIAVNALGHAHPELREALNEQASKFWHTGNGYTNEPVLRLAKKLIDATFADRVFFCNSG 105

HSP 2 Score: 22.3274 bits (46), Expect = 3.440e-13
Identity = 8/25 (32.00%), Postives = 15/25 (60.00%), Query Frame = 2 
Query:   23 NKLLVGTYNRAPVVLASGKGCKLYD 97
            N+ ++  Y  AP +   G+G +L+D
Sbjct:   11 NEWMIPVYAPAPFIPVRGEGSRLWD 35
[Close]
BLAST of CF504582 vs. ExPASy Swiss-Prot
Match: ARGD_THEEB (Acetylornithine aminotransferase OS=Thermosynechococcus elongatus (strain BP-1) GN=argD PE=3 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 4.467e-13
Identity = 34/69 (49.28%), Postives = 41/69 (59.42%), Query Frame = 3 
Query:  102 EGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTG 308
            +GR YLD  +GIA   LGH     ++ V  Q   L HVSN+YY   Q  LA+ LVA S  DRVFF N+G
Sbjct:   41 QGRSYLDFVAGIATCTLGHAHPALVETVSRQMQTLHHVSNLYYIPQQGALAQWLVAHSCGDRVFFCNSG 109

HSP 2 Score: 31.187 bits (69), Expect = 4.467e-13
Identity = 10/28 (35.71%), Postives = 21/28 (75.00%), Query Frame = 2 
Query:   14 EAENKLLVGTYNRAPVVLASGKGCKLYD 97
            +A +++++ TY R P+ L  G+GC+++D
Sbjct:   12 DAFDQVVMSTYGRFPITLVRGEGCRVWD 39
[Close]
BLAST of CF504582 vs. ExPASy Swiss-Prot
Match: ARGD_BUCAI (Acetylornithine/succinyldiaminopimelate aminotransferase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=argD PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.469e-13
Identity = 31/69 (44.93%), Postives = 50/69 (72.46%), Query Frame = 3 
Query:  102 EGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTG 308
            +G+EY+D S GIAV +LGH      K + +Q+ +L H+SN++ + P + LAK+L++ SFA R+FF+N+G
Sbjct:   40 KGKEYIDFSGGIAVTSLGHCHPILNKTLKNQSKMLWHLSNIFTNEPALRLAKKLLSSSFASRIFFANSG 108

HSP 2 Score: 25.0238 bits (53), Expect = 4.469e-13
Identity = 9/25 (36.00%), Postives = 16/25 (64.00%), Query Frame = 2 
Query:   23 NKLLVGTYNRAPVVLASGKGCKLYD 97
            +KL++  YN  P +   GKG +++D
Sbjct:   14 DKLILPIYNPIPFIPIKGKGSRIWD 38
[Close]
BLAST of CF504582 vs. ExPASy Swiss-Prot
Match: ASTC_ECO27 (Succinylornithine transaminase OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=astC PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 5.804e-13
Identity = 34/69 (49.28%), Postives = 48/69 (69.57%), Query Frame = 3 
Query:  102 EGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACSFADRVFFSNTG 308
            +G+EY+D S GIAVNALGH   +  +A+ +QA+   H  N Y + P + LAK+L+  +FADRVFF N+G
Sbjct:   37 QGKEYIDFSGGIAVNALGHAHPELREALNEQASKFWHTGNGYTNEPVLRLAKKLIDATFADRVFFCNSG 105

HSP 2 Score: 20.4014 bits (41), Expect = 5.804e-13
Identity = 7/22 (31.82%), Postives = 13/22 (59.09%), Query Frame = 2 
Query:   32 LVGTYNRAPVVLASGKGCKLYD 97
            ++  Y  AP +   G+G +L+D
Sbjct:   14 MIPVYAPAPFIPVRGEGSRLWD 35
[Close]
BLAST of CF504582 vs. ExPASy Swiss-Prot
Match: ARGD_XYLFT (Acetylornithine aminotransferase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=argD PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.106e-13
Identity = 37/70 (52.86%), Postives = 51/70 (72.86%), Query Frame = 3 
Query:  102 EGREYLDLSSGIAVNALGHGDADWIKAVVDQANVLTHVSNMYYSIPQIELAKRLVACS-FADRVFFSNTG 308
            +GR+YLDL++GIAV  LGH D D + A+V+QA  L H SN++YS P + LA+ LV  S FA+RVF  ++G
Sbjct:   38 QGRDYLDLAAGIAVCCLGHCDPDLVAALVEQAGRLWHTSNVFYSEPSLRLAQELVDVSRFAERVFLCSSG 107
The following BLAST results are available for this feature:
BLAST of CF504582 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 93
Match NameE-valueIdentityDescription
ARGD_NEIMA4.229e-1456.52Acetylornithine aminotransferase OS=Neisseria meni... [more]
ARGD_DICDI7.213e-1450.00Probable acetylornithine aminotransferase, mitocho... [more]
ARGD_PSEPK9.421e-1452.94Acetylornithine aminotransferase OS=Pseudomonas pu... [more]
ARGD_NEIMB1.230e-1355.07Acetylornithine aminotransferase OS=Neisseria meni... [more]
ARGD_SYNY31.568e-1353.62Acetylornithine aminotransferase OS=Synechocystis ... [more]
ASTC_ECO553.440e-1347.83Succinylornithine transaminase OS=Escherichia coli... [more]
ARGD_THEEB4.467e-1349.28Acetylornithine aminotransferase OS=Thermosynechoc... [more]
ARGD_BUCAI4.469e-1344.93Acetylornithine/succinyldiaminopimelate aminotrans... [more]
ASTC_ECO275.804e-1349.28Succinylornithine transaminase OS=Escherichia coli... [more]
ARGD_XYLFT6.106e-1352.86Acetylornithine aminotransferase OS=Xylella fastid... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-071 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-19_H12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504582 ID=CF504582; Name=CF504582; organism=Citrus sinensis; type=EST; length=309bp
CAAGGAGGTGATGGAGGCGGAGAATAAGTTACTCGTGGGGACGTACAATA
GGGCACCAGTTGTGCTGGCGAGTGGTAAAGGATGTAAATTGTACGATGCC
TGAAGGGCGAGAGTATTTGGATTTGAGCTCGGGGATTGCTGTGAATGCGC
TTGGACATGGGGATGCTGATTGGATCAAGGCTGTTGTTGATCAAGCTAAT
GTGTTGACTCATGTTAGCAATATGTATTATTCCATTCCTCAGATAGAGCT
TGCTAAGCGTTTGGTGGCTTGTTCTTTTGCTGATCGTGTGTTTTTCTCCA
ATACTGGAA
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