CF504584
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504584 vs. ExPASy Swiss-Prot
Match: CESA2_ARATH (Cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Arabidopsis thaliana GN=CESA2 PE=1 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.369e-48 Identity = 53/59 (89.83%), Postives = 55/59 (93.22%), Query Frame = 3 Query: 120 GLRCTCHGWRSVYCIPKRACFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYG 296 G + CHGWRSVYC+PKRA FKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYG Sbjct: 788 GFKMHCHGWRSVYCMPKRAAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYG 846 HSP 2 Score: 90.1225 bits (222), Expect = 1.369e-48 Identity = 40/43 (93.02%), Postives = 42/43 (97.67%), Query Frame = 2 Query: 5 ASLLKEAIQVISCGYEDKTEWGKEVGWIYGSVTEDILTGFKMH 133 A LL+EAIQVISCGYEDKTEWGKE+GWIYGSVTEDILTGFKMH Sbjct: 750 ACLLREAIQVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMH 792
BLAST of CF504584 vs. ExPASy Swiss-Prot
Match: CESA9_ARATH (Probable cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Arabidopsis thaliana GN=CESA9 PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 2.325e-48 Identity = 53/59 (89.83%), Postives = 55/59 (93.22%), Query Frame = 3 Query: 120 GLRCTCHGWRSVYCIPKRACFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYG 296 G + CHGWRSVYC+PKRA FKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYG Sbjct: 792 GFKMHCHGWRSVYCMPKRAAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYG 850 HSP 2 Score: 89.3521 bits (220), Expect = 2.325e-48 Identity = 39/43 (90.70%), Postives = 43/43 (100.00%), Query Frame = 2 Query: 5 ASLLKEAIQVISCGYEDKTEWGKEVGWIYGSVTEDILTGFKMH 133 ASLL+E+IQVISCGYE+KTEWGKE+GWIYGSVTEDILTGFKMH Sbjct: 754 ASLLRESIQVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMH 796
BLAST of CF504584 vs. ExPASy Swiss-Prot
Match: CESA5_ORYSJ (Probable cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA5 PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 3.287e-47 Identity = 48/59 (81.36%), Postives = 53/59 (89.83%), Query Frame = 3 Query: 120 GLRCTCHGWRSVYCIPKRACFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYG 296 G + CHGWRS+YCIPKRA FKGSAP+NLSDRLHQVLRWALGS+EIF S HCP+WYGYG Sbjct: 796 GFKMHCHGWRSIYCIPKRAAFKGSAPLNLSDRLHQVLRWALGSIEIFFSNHCPLWYGYG 854 HSP 2 Score: 90.1225 bits (222), Expect = 3.287e-47 Identity = 40/43 (93.02%), Postives = 42/43 (97.67%), Query Frame = 2 Query: 5 ASLLKEAIQVISCGYEDKTEWGKEVGWIYGSVTEDILTGFKMH 133 ASLLKEAI VISCGYEDKT+WGKE+GWIYGSVTEDILTGFKMH Sbjct: 758 ASLLKEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMH 800
BLAST of CF504584 vs. ExPASy Swiss-Prot
Match: CESA5_ORYSI (Probable cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA5 PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 3.287e-47 Identity = 48/59 (81.36%), Postives = 53/59 (89.83%), Query Frame = 3 Query: 120 GLRCTCHGWRSVYCIPKRACFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYG 296 G + CHGWRS+YCIPKRA FKGSAP+NLSDRLHQVLRWALGS+EIF S HCP+WYGYG Sbjct: 796 GFKMHCHGWRSIYCIPKRAAFKGSAPLNLSDRLHQVLRWALGSIEIFFSNHCPLWYGYG 854 HSP 2 Score: 90.1225 bits (222), Expect = 3.287e-47 Identity = 40/43 (93.02%), Postives = 42/43 (97.67%), Query Frame = 2 Query: 5 ASLLKEAIQVISCGYEDKTEWGKEVGWIYGSVTEDILTGFKMH 133 ASLLKEAI VISCGYEDKT+WGKE+GWIYGSVTEDILTGFKMH Sbjct: 758 ASLLKEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMH 800
BLAST of CF504584 vs. ExPASy Swiss-Prot
Match: CESA6_ORYSJ (Probable cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA6 PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 7.277e-47 Identity = 48/59 (81.36%), Postives = 53/59 (89.83%), Query Frame = 3 Query: 120 GLRCTCHGWRSVYCIPKRACFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYG 296 G + CHGWRS+YCIPKR FKGSAP+NLSDRLHQVLRWALGSVEIF S+HCP+WYGYG Sbjct: 796 GFKMHCHGWRSIYCIPKRPAFKGSAPLNLSDRLHQVLRWALGSVEIFFSKHCPLWYGYG 854 HSP 2 Score: 89.7373 bits (221), Expect = 7.277e-47 Identity = 39/43 (90.70%), Postives = 42/43 (97.67%), Query Frame = 2 Query: 5 ASLLKEAIQVISCGYEDKTEWGKEVGWIYGSVTEDILTGFKMH 133 ASLLKEAI VISCGYEDKT+WGKE+GWIYGS+TEDILTGFKMH Sbjct: 758 ASLLKEAIHVISCGYEDKTDWGKEIGWIYGSITEDILTGFKMH 800
BLAST of CF504584 vs. ExPASy Swiss-Prot
Match: CESA6_ARATH (Cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Arabidopsis thaliana GN=CESA6 PE=1 SV=2) HSP 1 Score: 115.546 bits (288), Expect = 9.485e-47 Identity = 51/59 (86.44%), Postives = 52/59 (88.14%), Query Frame = 3 Query: 120 GLRCTCHGWRSVYCIPKRACFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYG 296 G + HGWRSVYC PK A FKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYG Sbjct: 789 GFKMHSHGWRSVYCTPKLAAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYG 847 HSP 2 Score: 91.2781 bits (225), Expect = 9.485e-47 Identity = 41/43 (95.35%), Postives = 42/43 (97.67%), Query Frame = 2 Query: 5 ASLLKEAIQVISCGYEDKTEWGKEVGWIYGSVTEDILTGFKMH 133 A LLKEAIQVISCGYEDKTEWGKE+GWIYGSVTEDILTGFKMH Sbjct: 751 ACLLKEAIQVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMH 793
BLAST of CF504584 vs. ExPASy Swiss-Prot
Match: CESA5_ARATH (Cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Arabidopsis thaliana GN=CESA5 PE=1 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 2.737e-46 Identity = 50/59 (84.75%), Postives = 51/59 (86.44%), Query Frame = 3 Query: 120 GLRCTCHGWRSVYCIPKRACFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYG 296 G + HGWRSVYC PK FKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYG Sbjct: 774 GFKMHSHGWRSVYCTPKIPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYG 832 HSP 2 Score: 92.0485 bits (227), Expect = 2.737e-46 Identity = 41/43 (95.35%), Postives = 43/43 (100.00%), Query Frame = 2 Query: 5 ASLLKEAIQVISCGYEDKTEWGKEVGWIYGSVTEDILTGFKMH 133 ASLL+EAIQVISCGYEDKTEWGKE+GWIYGSVTEDILTGFKMH Sbjct: 736 ASLLREAIQVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMH 778
BLAST of CF504584 vs. ExPASy Swiss-Prot
Match: CESA3_ORYSJ (Probable cellulose synthase A catalytic subunit 3 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA3 PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 6.056e-46 Identity = 47/59 (79.66%), Postives = 51/59 (86.44%), Query Frame = 3 Query: 120 GLRCTCHGWRSVYCIPKRACFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYG 296 G + CHGWRS+YCIPK FKGSAP+NLSDRLHQVLRWALGSVEIF S HCP+WYGYG Sbjct: 797 GFKMHCHGWRSIYCIPKLPAFKGSAPLNLSDRLHQVLRWALGSVEIFFSNHCPLWYGYG 855 HSP 2 Score: 90.1225 bits (222), Expect = 6.056e-46 Identity = 40/43 (93.02%), Postives = 42/43 (97.67%), Query Frame = 2 Query: 5 ASLLKEAIQVISCGYEDKTEWGKEVGWIYGSVTEDILTGFKMH 133 ASLLKEAI VISCGYEDKT+WGKE+GWIYGSVTEDILTGFKMH Sbjct: 759 ASLLKEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMH 801
BLAST of CF504584 vs. ExPASy Swiss-Prot
Match: CESA4_ORYSJ (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA4 PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 8.564e-45 Identity = 48/59 (81.36%), Postives = 52/59 (88.14%), Query Frame = 3 Query: 120 GLRCTCHGWRSVYCIPKRACFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYG 296 G + C GWRS+YC+P R FKGSAPINLSDRLHQVLRWALGSVEIFLSRHCP+WYGYG Sbjct: 692 GFKMHCRGWRSIYCMPIRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYGYG 750 HSP 2 Score: 86.6557 bits (213), Expect = 8.564e-45 Identity = 37/43 (86.05%), Postives = 42/43 (97.67%), Query Frame = 2 Query: 5 ASLLKEAIQVISCGYEDKTEWGKEVGWIYGSVTEDILTGFKMH 133 ++L+KEAI VISCGYE+KTEWGKE+GWIYGSVTEDILTGFKMH Sbjct: 654 STLIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMH 696
BLAST of CF504584 vs. ExPASy Swiss-Prot
Match: CESA4_ORYSI (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA4 PE=2 SV=2) HSP 1 Score: 113.62 bits (283), Expect = 8.564e-45 Identity = 48/59 (81.36%), Postives = 52/59 (88.14%), Query Frame = 3 Query: 120 GLRCTCHGWRSVYCIPKRACFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYG 296 G + C GWRS+YC+P R FKGSAPINLSDRLHQVLRWALGSVEIFLSRHCP+WYGYG Sbjct: 692 GFKMHCRGWRSIYCMPIRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYGYG 750 HSP 2 Score: 86.6557 bits (213), Expect = 8.564e-45 Identity = 37/43 (86.05%), Postives = 42/43 (97.67%), Query Frame = 2 Query: 5 ASLLKEAIQVISCGYEDKTEWGKEVGWIYGSVTEDILTGFKMH 133 ++L+KEAI VISCGYE+KTEWGKE+GWIYGSVTEDILTGFKMH Sbjct: 654 STLIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMH 696 The following BLAST results are available for this feature:
BLAST of CF504584 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 51
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504584 ID=CF504584; Name=CF504584; organism=Citrus sinensis; type=EST; length=296bpback to top |