CF504584
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504584 vs. ExPASy Swiss-Prot
Match: CESA7_ORYSJ (Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA7 PE=2 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 1.453e-44 Identity = 47/59 (79.66%), Postives = 51/59 (86.44%), Query Frame = 3 Query: 120 GLRCTCHGWRSVYCIPKRACFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYG 296 G + C GW+SVYC P RA FKGSAPINLSDRLHQVLRWALGSVEIF+SRHCP+WY YG Sbjct: 766 GFKMHCRGWKSVYCTPARAAFKGSAPINLSDRLHQVLRWALGSVEIFMSRHCPLWYAYG 824 HSP 2 Score: 87.8113 bits (216), Expect = 1.453e-44 Identity = 38/43 (88.37%), Postives = 42/43 (97.67%), Query Frame = 2 Query: 5 ASLLKEAIQVISCGYEDKTEWGKEVGWIYGSVTEDILTGFKMH 133 A+L+KEAI VISCGYE+KTEWGKE+GWIYGSVTEDILTGFKMH Sbjct: 728 AALIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMH 770
BLAST of CF504584 vs. ExPASy Swiss-Prot
Match: CESA4_ARATH (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Arabidopsis thaliana GN=CESA4 PE=1 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 4.191e-44 Identity = 47/59 (79.66%), Postives = 51/59 (86.44%), Query Frame = 3 Query: 120 GLRCTCHGWRSVYCIPKRACFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYG 296 G R C GW+SVYC+PKR FKGSAPINLSDRLHQVLRWALGSVEIF SRHCP+WY +G Sbjct: 752 GFRMHCRGWKSVYCMPKRPAFKGSAPINLSDRLHQVLRWALGSVEIFFSRHCPLWYAWG 810 HSP 2 Score: 86.6557 bits (213), Expect = 4.191e-44 Identity = 37/43 (86.05%), Postives = 42/43 (97.67%), Query Frame = 2 Query: 5 ASLLKEAIQVISCGYEDKTEWGKEVGWIYGSVTEDILTGFKMH 133 +SL+KEAI VISCGYE+KTEWGKE+GWIYGSVTEDILTGF+MH Sbjct: 714 SSLIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFRMH 756
BLAST of CF504584 vs. ExPASy Swiss-Prot
Match: CESA8_ARATH (Cellulose synthase A catalytic subunit 8 [UDP-forming] OS=Arabidopsis thaliana GN=CESA8 PE=1 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.676e-43 Identity = 46/57 (80.70%), Postives = 50/57 (87.72%), Query Frame = 3 Query: 120 GLRCTCHGWRSVYCIPKRACFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYG 290 G + C GWRS+YC+P R FKGSAPINLSDRLHQVLRWALGSVEIFLSRHCP+WYG Sbjct: 687 GFKMHCRGWRSIYCMPLRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYG 743 HSP 2 Score: 86.2705 bits (212), Expect = 2.676e-43 Identity = 36/43 (83.72%), Postives = 42/43 (97.67%), Query Frame = 2 Query: 5 ASLLKEAIQVISCGYEDKTEWGKEVGWIYGSVTEDILTGFKMH 133 ++L+KEAI VISCGYE+KTEWGKE+GWIYGS+TEDILTGFKMH Sbjct: 649 STLIKEAIHVISCGYEEKTEWGKEIGWIYGSITEDILTGFKMH 691
BLAST of CF504584 vs. ExPASy Swiss-Prot
Match: CESA8_ORYSJ (Probable cellulose synthase A catalytic subunit 8 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA8 PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 3.484e-43 Identity = 46/59 (77.97%), Postives = 50/59 (84.75%), Query Frame = 3 Query: 120 GLRCTCHGWRSVYCIPKRACFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYG 296 G + GWRS+YC+PKR FKGSAPINLSDRL+QVLRWALGSVEI SRHCPIWYGYG Sbjct: 785 GFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYG 843 HSP 2 Score: 87.4261 bits (215), Expect = 3.484e-43 Identity = 39/42 (92.86%), Postives = 40/42 (95.24%), Query Frame = 2 Query: 8 SLLKEAIQVISCGYEDKTEWGKEVGWIYGSVTEDILTGFKMH 133 SLLKEAI VISCGYEDKTEWG E+GWIYGSVTEDILTGFKMH Sbjct: 748 SLLKEAIHVISCGYEDKTEWGTEIGWIYGSVTEDILTGFKMH 789
BLAST of CF504584 vs. ExPASy Swiss-Prot
Match: CESA2_ORYSJ (Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA2 PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 2.222e-42 Identity = 46/59 (77.97%), Postives = 50/59 (84.75%), Query Frame = 3 Query: 120 GLRCTCHGWRSVYCIPKRACFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYG 296 G + GWRS+YC+PKR FKGSAPINLSDRL+QVLRWALGSVEI SRHCPIWYGYG Sbjct: 777 GFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYG 835 HSP 2 Score: 84.7297 bits (208), Expect = 2.222e-42 Identity = 37/42 (88.10%), Postives = 40/42 (95.24%), Query Frame = 2 Query: 8 SLLKEAIQVISCGYEDKTEWGKEVGWIYGSVTEDILTGFKMH 133 SLLKEAI VISCGYEDK++WG E+GWIYGSVTEDILTGFKMH Sbjct: 740 SLLKEAIHVISCGYEDKSDWGTEIGWIYGSVTEDILTGFKMH 781
BLAST of CF504584 vs. ExPASy Swiss-Prot
Match: CESA2_ORYSI (Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA2 PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 2.222e-42 Identity = 46/59 (77.97%), Postives = 50/59 (84.75%), Query Frame = 3 Query: 120 GLRCTCHGWRSVYCIPKRACFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYG 296 G + GWRS+YC+PKR FKGSAPINLSDRL+QVLRWALGSVEI SRHCPIWYGYG Sbjct: 777 GFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYG 835 HSP 2 Score: 84.7297 bits (208), Expect = 2.222e-42 Identity = 37/42 (88.10%), Postives = 40/42 (95.24%), Query Frame = 2 Query: 8 SLLKEAIQVISCGYEDKTEWGKEVGWIYGSVTEDILTGFKMH 133 SLLKEAI VISCGYEDK++WG E+GWIYGSVTEDILTGFKMH Sbjct: 740 SLLKEAIHVISCGYEDKSDWGTEIGWIYGSVTEDILTGFKMH 781
BLAST of CF504584 vs. ExPASy Swiss-Prot
Match: CESA7_ARATH (Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Arabidopsis thaliana GN=CESA7 PE=1 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.897e-42 Identity = 45/58 (77.59%), Postives = 50/58 (86.21%), Query Frame = 3 Query: 120 GLRCTCHGWRSVYCIPKRACFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGY 293 G + C GWRS+YC+PKR FKGSAPINLSDRL+QVLRWALGSVEIF SRH P+WYGY Sbjct: 730 GFKMHCRGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEIFFSRHSPLWYGY 787 HSP 2 Score: 85.5001 bits (210), Expect = 2.897e-42 Identity = 38/43 (88.37%), Postives = 40/43 (93.02%), Query Frame = 2 Query: 5 ASLLKEAIQVISCGYEDKTEWGKEVGWIYGSVTEDILTGFKMH 133 A LLKEAI VISCGYEDKTEWG E+GWIYGS+TEDILTGFKMH Sbjct: 692 AVLLKEAIHVISCGYEDKTEWGTELGWIYGSITEDILTGFKMH 734
BLAST of CF504584 vs. ExPASy Swiss-Prot
Match: CESA9_ORYSJ (Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA9 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 2.406e-41 Identity = 46/58 (79.31%), Postives = 50/58 (86.21%), Query Frame = 3 Query: 120 GLRCTCHGWRSVYCIPKRACFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGY 293 G + C GWRSVYC+PKRA FKGSAPINLSDRL+QVLRWALGSVEIF SRH P+ YGY Sbjct: 757 GFKMHCRGWRSVYCMPKRAAFKGSAPINLSDRLNQVLRWALGSVEIFFSRHSPLLYGY 814 HSP 2 Score: 85.1149 bits (209), Expect = 2.406e-41 Identity = 37/43 (86.05%), Postives = 41/43 (95.35%), Query Frame = 2 Query: 5 ASLLKEAIQVISCGYEDKTEWGKEVGWIYGSVTEDILTGFKMH 133 A+LLKEAI VISCGYEDKT+WG E+GWIYGS+TEDILTGFKMH Sbjct: 719 AALLKEAIHVISCGYEDKTDWGLELGWIYGSITEDILTGFKMH 761
BLAST of CF504584 vs. ExPASy Swiss-Prot
Match: CESA9_ORYSI (Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA9 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 2.406e-41 Identity = 46/58 (79.31%), Postives = 50/58 (86.21%), Query Frame = 3 Query: 120 GLRCTCHGWRSVYCIPKRACFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGY 293 G + C GWRSVYC+PKRA FKGSAPINLSDRL+QVLRWALGSVEIF SRH P+ YGY Sbjct: 757 GFKMHCRGWRSVYCMPKRAAFKGSAPINLSDRLNQVLRWALGSVEIFFSRHSPLLYGY 814 HSP 2 Score: 85.1149 bits (209), Expect = 2.406e-41 Identity = 37/43 (86.05%), Postives = 41/43 (95.35%), Query Frame = 2 Query: 5 ASLLKEAIQVISCGYEDKTEWGKEVGWIYGSVTEDILTGFKMH 133 A+LLKEAI VISCGYEDKT+WG E+GWIYGS+TEDILTGFKMH Sbjct: 719 AALLKEAIHVISCGYEDKTDWGLELGWIYGSITEDILTGFKMH 761
BLAST of CF504584 vs. ExPASy Swiss-Prot
Match: CESA3_ARATH (Cellulose synthase A catalytic subunit 3 [UDP-forming] OS=Arabidopsis thaliana GN=CESA3 PE=1 SV=2) HSP 1 Score: 102.449 bits (254), Expect = 1.534e-40 Identity = 44/58 (75.86%), Postives = 48/58 (82.76%), Query Frame = 3 Query: 120 GLRCTCHGWRSVYCIPKRACFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGY 293 G + GWRS+YC+PK FKGSAPINLSDRL+QVLRWALGSVEI SRHCPIWYGY Sbjct: 769 GFKMHARGWRSIYCMPKLPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGY 826 HSP 2 Score: 83.5741 bits (205), Expect = 1.534e-40 Identity = 36/42 (85.71%), Postives = 40/42 (95.24%), Query Frame = 2 Query: 8 SLLKEAIQVISCGYEDKTEWGKEVGWIYGSVTEDILTGFKMH 133 +LLKEAI VISCGYEDK++WG E+GWIYGSVTEDILTGFKMH Sbjct: 732 NLLKEAIHVISCGYEDKSDWGMEIGWIYGSVTEDILTGFKMH 773 The following BLAST results are available for this feature:
BLAST of CF504584 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 51
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504584 ID=CF504584; Name=CF504584; organism=Citrus sinensis; type=EST; length=296bpback to top |