CF504584
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Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504584 vs. ExPASy Swiss-Prot
Match: CSLD5_ARATH (Cellulose synthase-like protein D5 OS=Arabidopsis thaliana GN=CSLD5 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.796e-31 Identity = 36/55 (65.45%), Postives = 43/55 (78.18%), Query Frame = 3
Query: 120 GLRCTCHGWRSVYCIPKRACFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIW 284
G R GWRS+YC+ KR F+G+APINL+DRLHQVLRWA GSVEIF SR+ I+
Sbjct: 888 GYRMHNRGWRSIYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNAIF 942 HSP 2 Score: 75.8702 bits (185), Expect = 1.796e-31 Identity = 32/43 (74.42%), Postives = 38/43 (88.37%), Query Frame = 2
Query: 5 ASLLKEAIQVISCGYEDKTEWGKEVGWIYGSVTEDILTGFKMH 133
A+ + EAI VISC YEDKTEWGK VGWIYGSVTED++TG++MH
Sbjct: 850 AATVAEAISVISCFYEDKTEWGKRVGWIYGSVTEDVVTGYRMH 892
BLAST of CF504584 vs. ExPASy Swiss-Prot
Match: CSLD2_ORYSJ (Cellulose synthase-like protein D2 OS=Oryza sativa subsp. japonica GN=CSLD2 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.965e-31 Identity = 35/51 (68.63%), Postives = 41/51 (80.39%), Query Frame = 3
Query: 120 GLRCTCHGWRSVYCIPKRACFKGSAPINLSDRLHQVLRWALGSVEIFLSRH 272
G R GW+SVYC+ KR F+G+APINL+DRLHQVLRWA GSVEIF SR+
Sbjct: 877 GYRMHNRGWKSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRN 927 HSP 2 Score: 75.8702 bits (185), Expect = 3.965e-31 Identity = 32/43 (74.42%), Postives = 38/43 (88.37%), Query Frame = 2
Query: 5 ASLLKEAIQVISCGYEDKTEWGKEVGWIYGSVTEDILTGFKMH 133
AS + EAI VISC YEDKTEWG+ VGWIYGSVTED++TG++MH
Sbjct: 839 ASTVAEAISVISCWYEDKTEWGQRVGWIYGSVTEDVVTGYRMH 881
BLAST of CF504584 vs. ExPASy Swiss-Prot
Match: CSLD2_ORYSI (Cellulose synthase-like protein D2 OS=Oryza sativa subsp. indica GN=CSLD2 PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.965e-31 Identity = 35/51 (68.63%), Postives = 41/51 (80.39%), Query Frame = 3
Query: 120 GLRCTCHGWRSVYCIPKRACFKGSAPINLSDRLHQVLRWALGSVEIFLSRH 272
G R GW+SVYC+ KR F+G+APINL+DRLHQVLRWA GSVEIF SR+
Sbjct: 877 GYRMHNRGWKSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRN 927 HSP 2 Score: 75.8702 bits (185), Expect = 3.965e-31 Identity = 32/43 (74.42%), Postives = 38/43 (88.37%), Query Frame = 2
Query: 5 ASLLKEAIQVISCGYEDKTEWGKEVGWIYGSVTEDILTGFKMH 133
AS + EAI VISC YEDKTEWG+ VGWIYGSVTED++TG++MH
Sbjct: 839 ASTVAEAISVISCWYEDKTEWGQRVGWIYGSVTEDVVTGYRMH 881
BLAST of CF504584 vs. ExPASy Swiss-Prot
Match: CSLD3_ARATH (Cellulose synthase-like protein D3 OS=Arabidopsis thaliana GN=CSLD3 PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 8.756e-31 Identity = 35/51 (68.63%), Postives = 41/51 (80.39%), Query Frame = 3
Query: 120 GLRCTCHGWRSVYCIPKRACFKGSAPINLSDRLHQVLRWALGSVEIFLSRH 272
G R GW+SVYC+ KR F+G+APINL+DRLHQVLRWA GSVEIF SR+
Sbjct: 852 GYRMHNRGWKSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRN 902 HSP 2 Score: 74.7146 bits (182), Expect = 8.756e-31 Identity = 31/43 (72.09%), Postives = 37/43 (86.05%), Query Frame = 2
Query: 5 ASLLKEAIQVISCGYEDKTEWGKEVGWIYGSVTEDILTGFKMH 133
AS + EAI VISC YEDKTEWG +GWIYGSVTED++TG++MH
Sbjct: 814 ASTVAEAIAVISCWYEDKTEWGSRIGWIYGSVTEDVVTGYRMH 856
BLAST of CF504584 vs. ExPASy Swiss-Prot
Match: CSLD2_ARATH (Cellulose synthase-like protein D2 OS=Arabidopsis thaliana GN=CSLD2 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 8.756e-31 Identity = 35/51 (68.63%), Postives = 41/51 (80.39%), Query Frame = 3
Query: 120 GLRCTCHGWRSVYCIPKRACFKGSAPINLSDRLHQVLRWALGSVEIFLSRH 272
G R GW+SVYC+ KR F+G+APINL+DRLHQVLRWA GSVEIF SR+
Sbjct: 852 GYRMHNRGWKSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRN 902 HSP 2 Score: 74.7146 bits (182), Expect = 8.756e-31 Identity = 31/43 (72.09%), Postives = 37/43 (86.05%), Query Frame = 2
Query: 5 ASLLKEAIQVISCGYEDKTEWGKEVGWIYGSVTEDILTGFKMH 133
AS + EAI VISC YEDKTEWG +GWIYGSVTED++TG++MH
Sbjct: 814 ASTVAEAIAVISCWYEDKTEWGSRIGWIYGSVTEDVVTGYRMH 856
BLAST of CF504584 vs. ExPASy Swiss-Prot
Match: CSLD3_ORYSJ (Cellulose synthase-like protein D3 OS=Oryza sativa subsp. japonica GN=CSLD3 PE=2 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 5.555e-30 Identity = 37/51 (72.55%), Postives = 40/51 (78.43%), Query Frame = 3
Query: 120 GLRCTCHGWRSVYCIPKRACFKGSAPINLSDRLHQVLRWALGSVEIFLSRH 272
G R GWRSVYCI KR F G+APINL+DRLHQVLRWA GSVEIF SR+
Sbjct: 851 GYRMHNRGWRSVYCITKRDAFLGTAPINLTDRLHQVLRWATGSVEIFFSRN 901 HSP 2 Score: 72.0182 bits (175), Expect = 5.555e-30 Identity = 29/38 (76.32%), Postives = 34/38 (89.47%), Query Frame = 2
Query: 20 EAIQVISCGYEDKTEWGKEVGWIYGSVTEDILTGFKMH 133
EA+ VISC YEDKTEWG VGWIYGSVTED++TG++MH
Sbjct: 818 EAVSVISCWYEDKTEWGDRVGWIYGSVTEDVVTGYRMH 855
BLAST of CF504584 vs. ExPASy Swiss-Prot
Match: CSLD1_ARATH (Cellulose synthase-like protein D1 OS=Arabidopsis thaliana GN=CSLD1 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.228e-29 Identity = 36/51 (70.59%), Postives = 41/51 (80.39%), Query Frame = 3
Query: 120 GLRCTCHGWRSVYCIPKRACFKGSAPINLSDRLHQVLRWALGSVEIFLSRH 272
G R GWRSVYCI KR F+G+APINL+DRLHQVLRWA GSVEIF S++
Sbjct: 745 GYRMHNRGWRSVYCITKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSKN 795 HSP 2 Score: 70.4774 bits (171), Expect = 1.228e-29 Identity = 29/43 (67.44%), Postives = 35/43 (81.40%), Query Frame = 2
Query: 5 ASLLKEAIQVISCGYEDKTEWGKEVGWIYGSVTEDILTGFKMH 133
A + EAI VISC YED TEWG +GWIYGSVTED++TG++MH
Sbjct: 707 APTVAEAIAVISCWYEDNTEWGDRIGWIYGSVTEDVVTGYRMH 749
BLAST of CF504584 vs. ExPASy Swiss-Prot
Match: CSLD4_ORYSJ (Cellulose synthase-like protein D4 OS=Oryza sativa subsp. japonica GN=CSLD4 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.595e-29 Identity = 36/52 (69.23%), Postives = 42/52 (80.77%), Query Frame = 3
Query: 120 GLRCTCHGWRSVYCI-PKRACFKGSAPINLSDRLHQVLRWALGSVEIFLSRH 272
G R GWRSVYC+ P+R F+G+APINL+DRLHQVLRWA GSVEIF SR+
Sbjct: 909 GYRMHNRGWRSVYCVTPRRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRN 960 HSP 2 Score: 72.0182 bits (175), Expect = 1.595e-29 Identity = 29/43 (67.44%), Postives = 38/43 (88.37%), Query Frame = 2
Query: 5 ASLLKEAIQVISCGYEDKTEWGKEVGWIYGSVTEDILTGFKMH 133
A+ + EAI VISC YE+KTEWG+ +GWIYGSVTED++TG++MH
Sbjct: 871 AATVAEAIGVISCFYEEKTEWGRRIGWIYGSVTEDVVTGYRMH 913
BLAST of CF504584 vs. ExPASy Swiss-Prot
Match: CSLD5_ORYSJ (Cellulose synthase-like protein D5 OS=Oryza sativa subsp. japonica GN=CSLD5 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.599e-29 Identity = 35/51 (68.63%), Postives = 41/51 (80.39%), Query Frame = 3
Query: 120 GLRCTCHGWRSVYCIPKRACFKGSAPINLSDRLHQVLRWALGSVEIFLSRH 272
G R GWRSVYCI +R F+G+APINL+DRLHQVLRWA GSVEIF S++
Sbjct: 721 GYRMHNRGWRSVYCITRRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSKN 771 HSP 2 Score: 71.2478 bits (173), Expect = 1.599e-29 Identity = 28/43 (65.12%), Postives = 37/43 (86.05%), Query Frame = 2
Query: 5 ASLLKEAIQVISCGYEDKTEWGKEVGWIYGSVTEDILTGFKMH 133
A+ + E++ VISC YED TEWG+ VGWIYGSVTED++TG++MH
Sbjct: 683 AATVAESVSVISCWYEDNTEWGQRVGWIYGSVTEDVVTGYRMH 725
BLAST of CF504584 vs. ExPASy Swiss-Prot
Match: CSLD5_ORYSI (Putative cellulose synthase-like protein D5 OS=Oryza sativa subsp. indica GN=CSLD5 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.599e-29 Identity = 35/51 (68.63%), Postives = 41/51 (80.39%), Query Frame = 3
Query: 120 GLRCTCHGWRSVYCIPKRACFKGSAPINLSDRLHQVLRWALGSVEIFLSRH 272
G R GWRSVYCI +R F+G+APINL+DRLHQVLRWA GSVEIF S++
Sbjct: 721 GYRMHNRGWRSVYCITRRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSKN 771 HSP 2 Score: 71.2478 bits (173), Expect = 1.599e-29 Identity = 28/43 (65.12%), Postives = 37/43 (86.05%), Query Frame = 2
Query: 5 ASLLKEAIQVISCGYEDKTEWGKEVGWIYGSVTEDILTGFKMH 133
A+ + E++ VISC YED TEWG+ VGWIYGSVTED++TG++MH
Sbjct: 683 AATVAESVSVISCWYEDNTEWGQRVGWIYGSVTEDVVTGYRMH 725 The following BLAST results are available for this feature:
BLAST of CF504584 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 51
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504584 ID=CF504584; Name=CF504584; organism=Citrus sinensis; type=EST; length=296bpback to top |