CF504584
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504584 vs. ExPASy Swiss-Prot
Match: CSLD6_ARATH (Putative cellulose synthase-like protein D6 OS=Arabidopsis thaliana GN=CSLD6 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.600e-29 Identity = 36/57 (63.16%), Postives = 42/57 (73.68%), Query Frame = 3 Query: 120 GLRCTCHGWRSVYCIPKRACFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYG 290 G R GWRS YC+ + F+GSAPINL+DRLHQVLRWA GSVEIF SR+ I+ G Sbjct: 687 GFRMHEKGWRSFYCVTEPDAFRGSAPINLTDRLHQVLRWATGSVEIFFSRNNAIFAG 743 HSP 2 Score: 72.7886 bits (177), Expect = 1.600e-29 Identity = 30/40 (75.00%), Postives = 35/40 (87.50%), Query Frame = 2 Query: 14 LKEAIQVISCGYEDKTEWGKEVGWIYGSVTEDILTGFKMH 133 + EA+ VISC YEDKTEWG VGWIYGSVTED++TGF+MH Sbjct: 652 VNEAVNVISCWYEDKTEWGFNVGWIYGSVTEDVVTGFRMH 691
BLAST of CF504584 vs. ExPASy Swiss-Prot
Match: CSLF8_ORYSJ (Probable mixed-linked glucan synthase 8 OS=Oryza sativa subsp. japonica GN=CSFL8 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 6.522e-24 Identity = 29/57 (50.88%), Postives = 42/57 (73.68%), Query Frame = 3 Query: 120 GLRCTCHGWRSVYCIPKRACFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYG 290 G R GWRS+YC + F+G+APINL++RL+Q+LRW+ GS+E+F S +CP+ G Sbjct: 581 GFRLHRTGWRSMYCRMEPDAFRGTAPINLTERLYQILRWSGGSLEMFFSHNCPLLAG 637 HSP 2 Score: 62.003 bits (149), Expect = 6.522e-24 Identity = 22/42 (52.38%), Postives = 33/42 (78.57%), Query Frame = 2 Query: 8 SLLKEAIQVISCGYEDKTEWGKEVGWIYGSVTEDILTGFKMH 133 S+L+E ++C YED T+WGK+VGW+Y TED++TGF++H Sbjct: 544 SILQELSDAMACAYEDGTDWGKDVGWVYNIATEDVVTGFRLH 585
BLAST of CF504584 vs. ExPASy Swiss-Prot
Match: CSLF9_ORYSJ (Probable mixed-linked glucan synthase 9 OS=Oryza sativa subsp. japonica GN=CSLF9 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.870e-23 Identity = 30/57 (52.63%), Postives = 43/57 (75.44%), Query Frame = 3 Query: 120 GLRCTCHGWRSVYCIPKRACFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYG 290 G R GWRS+YC + F+G+APINL++RL+Q+LRW+ GS+E+F SR+CP+ G Sbjct: 569 GFRLHRKGWRSMYCAMEPDAFRGTAPINLTERLYQILRWSGGSLEMFFSRNCPLLAG 625 HSP 2 Score: 57.3806 bits (137), Expect = 1.870e-23 Identity = 21/40 (52.50%), Postives = 30/40 (75.00%), Query Frame = 2 Query: 14 LKEAIQVISCGYEDKTEWGKEVGWIYGSVTEDILTGFKMH 133 + E +V++C YED TEWG VGW+Y TED++TGF++H Sbjct: 534 MAEVEEVMTCAYEDGTEWGDGVGWVYDIATEDVVTGFRLH 573
BLAST of CF504584 vs. ExPASy Swiss-Prot
Match: CSLF7_ORYSJ (Probable mixed-linked glucan synthase 7 OS=Oryza sativa subsp. japonica GN=CSLF7 PE=1 SV=1) HSP 1 Score: 64.6994 bits (156), Expect = 3.169e-23 Identity = 29/44 (65.91%), Postives = 34/44 (77.27%), Query Frame = 3 Query: 141 GWRSVYCIPKRACFKGSAPINLSDRLHQVLRWALGSVEIFLSRH 272 GWRS Y F+G+APINL+DRLHQVLRWA GS+EIF SR+ Sbjct: 540 GWRSAYYAAAPDAFRGTAPINLADRLHQVLRWAAGSLEIFFSRN 583 HSP 2 Score: 63.1586 bits (152), Expect = 3.169e-23 Identity = 24/40 (60.00%), Postives = 32/40 (80.00%), Query Frame = 2 Query: 14 LKEAIQVISCGYEDKTEWGKEVGWIYGSVTEDILTGFKMH 133 + EA ++SC YED T WG++VGW+YG+VTED+ TGF MH Sbjct: 498 IAEASALVSCAYEDGTAWGRDVGWVYGTVTEDVATGFCMH 537
BLAST of CF504584 vs. ExPASy Swiss-Prot
Match: CESA1_ORYSJ (Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA1 PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 1.471e-22 Identity = 45/58 (77.59%), Postives = 49/58 (84.48%), Query Frame = 3 Query: 120 GLRCTCHGWRSVYCIPKRACFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGY 293 G + GW S+YC+P R CFKGSAPINLSDRL+QVLRWALGSVEI LSRHCPIWYGY Sbjct: 779 GFKMHARGWISIYCMPPRPCFKGSAPINLSDRLNQVLRWALGSVEILLSRHCPIWYGY 836 HSP 2 Score: 92.4337 bits (228), Expect = 7.553e-19 Identity = 47/74 (63.51%), Postives = 51/74 (68.92%), Query Frame = 2 Query: 5 ASLLKEAIQVISCGYEDKTEWGKEVGWIYGSVTEDILTGFKMHL-PWLEICILHSQTGLL*GISPHQSFRSSTP 223 ASLLKEAI VISCGYEDKTEWGKE+GWIYGSVTEDILTGFKMH W+ I + P F+ S P Sbjct: 741 ASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCM----------PPRPCFKGSAP 804
BLAST of CF504584 vs. ExPASy Swiss-Prot
Match: CESA1_ORYSI (Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA1 PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 1.471e-22 Identity = 45/58 (77.59%), Postives = 49/58 (84.48%), Query Frame = 3 Query: 120 GLRCTCHGWRSVYCIPKRACFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGY 293 G + GW S+YC+P R CFKGSAPINLSDRL+QVLRWALGSVEI LSRHCPIWYGY Sbjct: 779 GFKMHARGWISIYCMPPRPCFKGSAPINLSDRLNQVLRWALGSVEILLSRHCPIWYGY 836 HSP 2 Score: 92.4337 bits (228), Expect = 7.553e-19 Identity = 47/74 (63.51%), Postives = 51/74 (68.92%), Query Frame = 2 Query: 5 ASLLKEAIQVISCGYEDKTEWGKEVGWIYGSVTEDILTGFKMHL-PWLEICILHSQTGLL*GISPHQSFRSSTP 223 ASLLKEAI VISCGYEDKTEWGKE+GWIYGSVTEDILTGFKMH W+ I + P F+ S P Sbjct: 741 ASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCM----------PPRPCFKGSAP 804
BLAST of CF504584 vs. ExPASy Swiss-Prot
Match: CSLF6_ORYSJ (Probable mixed-linked glucan synthase 6 OS=Oryza sativa subsp. japonica GN=CSLF6 PE=2 SV=1) HSP 1 Score: 62.7734 bits (151), Expect = 4.393e-22 Identity = 30/55 (54.55%), Postives = 38/55 (69.09%), Query Frame = 3 Query: 120 GLRCTCHGWRSVYCIPKRACFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIW 284 G R GWRS YC F G+APINL++RL QVLRW+ GS+EIF SR+ P++ Sbjct: 640 GYRMHIKGWRSRYCSIYPHAFIGTAPINLTERLFQVLRWSTGSLEIFFSRNNPLF 694 HSP 2 Score: 61.2326 bits (147), Expect = 4.393e-22 Identity = 21/41 (51.22%), Postives = 33/41 (80.49%), Query Frame = 2 Query: 14 LKEAIQVISCGYEDKTEWGKEVGWIYGSVTEDILTGFKMHL 136 + EA+ V + YE KT WG ++GW+YG+VTED++TG++MH+ Sbjct: 605 IAEAVMVTAAAYEKKTGWGSDIGWVYGTVTEDVVTGYRMHI 645
BLAST of CF504584 vs. ExPASy Swiss-Prot
Match: CESAA_ARATH (Probable cellulose synthase A catalytic subunit 10 [UDP-forming] OS=Arabidopsis thaliana GN=CESA10 PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 9.533e-22 Identity = 43/58 (74.14%), Postives = 48/58 (82.76%), Query Frame = 3 Query: 120 GLRCTCHGWRSVYCIPKRACFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGY 293 G + GW S+YC+P R FKGSAPINLSDRL+QVLRWALGS+EI LSRHCPIWYGY Sbjct: 771 GFKMHARGWISIYCVPSRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGY 828 HSP 2 Score: 85.5001 bits (210), Expect = 9.233e-17 Identity = 40/55 (72.73%), Postives = 46/55 (83.64%), Query Frame = 2 Query: 8 SLLKEAIQVISCGYEDKTEWGKEVGWIYGSVTEDILTGFKMHL-PWLEICILHSQ 169 +LLKEAI VISCGYE KT+WGKE+GWIYGSVTEDILTGFKMH W+ I + S+ Sbjct: 734 TLLKEAIHVISCGYEAKTDWGKEIGWIYGSVTEDILTGFKMHARGWISIYCVPSR 788
BLAST of CF504584 vs. ExPASy Swiss-Prot
Match: CESA1_ARATH (Cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Arabidopsis thaliana GN=CESA1 PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 6.179e-21 Identity = 43/58 (74.14%), Postives = 47/58 (81.03%), Query Frame = 3 Query: 120 GLRCTCHGWRSVYCIPKRACFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGY 293 G + GW S+YC P R FKGSAPINLSDRL+QVLRWALGS+EI LSRHCPIWYGY Sbjct: 784 GFKMHARGWISIYCNPPRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGY 841 HSP 2 Score: 90.8929 bits (224), Expect = 2.198e-18 Identity = 42/50 (84.00%), Postives = 45/50 (90.00%), Query Frame = 2 Query: 5 ASLLKEAIQVISCGYEDKTEWGKEVGWIYGSVTEDILTGFKMHL-PWLEI 151 A+LLKEAI VISCGYEDKTEWGKE+GWIYGSVTEDILTGFKMH W+ I Sbjct: 746 ATLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISI 795
BLAST of CF504584 vs. ExPASy Swiss-Prot
Match: CSLF2_ORYSJ (Mixed-linked glucan synthase 2 OS=Oryza sativa subsp. japonica GN=CSLF2 PE=2 SV=1) HSP 1 Score: 61.2326 bits (147), Expect = 3.843e-20 Identity = 27/49 (55.10%), Postives = 37/49 (75.51%), Query Frame = 3 Query: 120 GLRCTCHGWRSVYCIPKRACFKGSAPINLSDRLHQVLRWALGSVEIFLS 266 G R GWRSVY + A F+G+APINL++RL+Q+LRW+ GS+E+F S Sbjct: 583 GFRMHRQGWRSVYASVEPAAFRGTAPINLTERLYQILRWSGGSLEMFFS 631 HSP 2 Score: 56.225 bits (134), Expect = 3.843e-20 Identity = 20/42 (47.62%), Postives = 30/42 (71.43%), Query Frame = 2 Query: 8 SLLKEAIQVISCGYEDKTEWGKEVGWIYGSVTEDILTGFKMH 133 S+ + + +C YED T WG++VGW+Y TED++TGF+MH Sbjct: 546 SVAGDLAALTACAYEDGTSWGRDVGWVYNIATEDVVTGFRMH 587 The following BLAST results are available for this feature:
BLAST of CF504584 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 51
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504584 ID=CF504584; Name=CF504584; organism=Citrus sinensis; type=EST; length=296bpback to top |