CF504584
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504584 vs. ExPASy Swiss-Prot
Match: CSLF1_ORYSJ (Putative mixed-linked glucan synthase 1 OS=Oryza sativa subsp. japonica GN=CSFL1 PE=3 SV=1) HSP 1 Score: 61.2326 bits (147), Expect = 3.845e-20 Identity = 27/49 (55.10%), Postives = 37/49 (75.51%), Query Frame = 3 Query: 120 GLRCTCHGWRSVYCIPKRACFKGSAPINLSDRLHQVLRWALGSVEIFLS 266 G R GWRSVY + A F+G+APINL++RL+Q+LRW+ GS+E+F S Sbjct: 553 GFRMHRQGWRSVYASVEPAAFRGTAPINLTERLYQILRWSGGSLEMFFS 601 HSP 2 Score: 56.225 bits (134), Expect = 3.845e-20 Identity = 20/42 (47.62%), Postives = 30/42 (71.43%), Query Frame = 2 Query: 8 SLLKEAIQVISCGYEDKTEWGKEVGWIYGSVTEDILTGFKMH 133 S+ + + +C YED T WG++VGW+Y TED++TGF+MH Sbjct: 516 SVAGDLAALTACAYEDGTSWGRDVGWVYNIATEDVVTGFRMH 557
BLAST of CF504584 vs. ExPASy Swiss-Prot
Match: CSLF4_ORYSJ (Mixed-linked glucan synthase 4 OS=Oryza sativa subsp. japonica GN=CSLF4 PE=3 SV=1) HSP 1 Score: 60.8474 bits (146), Expect = 3.143e-19 Identity = 27/49 (55.10%), Postives = 37/49 (75.51%), Query Frame = 3 Query: 120 GLRCTCHGWRSVYCIPKRACFKGSAPINLSDRLHQVLRWALGSVEIFLS 266 G R GWRSVY + A F+G+APINL++RL+Q+LRW+ GS+E+F S Sbjct: 592 GFRMHQQGWRSVYTSMEPAAFRGTAPINLTERLYQILRWSGGSLEMFFS 640 HSP 2 Score: 53.5286 bits (127), Expect = 3.143e-19 Identity = 19/42 (45.24%), Postives = 29/42 (69.05%), Query Frame = 2 Query: 8 SLLKEAIQVISCGYEDKTEWGKEVGWIYGSVTEDILTGFKMH 133 S+ ++ V +CGY+ T WG++ GW+Y TED+ TGF+MH Sbjct: 555 SVARDLAAVTACGYDLGTSWGRDAGWVYDIATEDVATGFRMH 596
BLAST of CF504584 vs. ExPASy Swiss-Prot
Match: CSLF3_ORYSJ (Probable mixed-linked glucan synthase 3 OS=Oryza sativa subsp. japonica GN=CSLF3 PE=2 SV=1) HSP 1 Score: 64.3142 bits (155), Expect = 8.993e-19 Identity = 27/54 (50.00%), Postives = 39/54 (72.22%), Query Frame = 3 Query: 120 GLRCTCHGWRSVYCIPKRACFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPI 281 G R GWRS+YC + F G+APINL++RLHQ++RW+ GS+E+F S + P+ Sbjct: 577 GFRIHGQGWRSMYCTMEHDAFCGTAPINLTERLHQIVRWSGGSLEMFFSHNNPL 630 HSP 2 Score: 48.521 bits (114), Expect = 8.993e-19 Identity = 19/40 (47.50%), Postives = 29/40 (72.50%), Query Frame = 2 Query: 14 LKEAIQVISCGYEDKTEWGKEVGWIYGSVTEDILTGFKMH 133 + E V+S ++ +T+WGK VG+IY TEDI+TGF++H Sbjct: 542 VNELEMVVSASFDKETDWGKGVGYIYDIATEDIVTGFRIH 581
BLAST of CF504584 vs. ExPASy Swiss-Prot
Match: CSLF3_ORYSI (Probable mixed-linked glucan synthase 3 OS=Oryza sativa subsp. indica GN=CSLF3 PE=3 SV=1) HSP 1 Score: 64.3142 bits (155), Expect = 8.993e-19 Identity = 27/54 (50.00%), Postives = 39/54 (72.22%), Query Frame = 3 Query: 120 GLRCTCHGWRSVYCIPKRACFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPI 281 G R GWRS+YC + F G+APINL++RLHQ++RW+ GS+E+F S + P+ Sbjct: 577 GFRIHGQGWRSMYCTMEHDAFCGTAPINLTERLHQIVRWSGGSLEMFFSHNNPL 630 HSP 2 Score: 48.521 bits (114), Expect = 8.993e-19 Identity = 19/40 (47.50%), Postives = 29/40 (72.50%), Query Frame = 2 Query: 14 LKEAIQVISCGYEDKTEWGKEVGWIYGSVTEDILTGFKMH 133 + E V+S ++ +T+WGK VG+IY TEDI+TGF++H Sbjct: 542 VNELEMVVSASFDKETDWGKGVGYIYDIATEDIVTGFRIH 581
BLAST of CF504584 vs. ExPASy Swiss-Prot
Match: CSLG3_ARATH (Cellulose synthase-like protein G3 OS=Arabidopsis thaliana GN=CSLG3 PE=2 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 1.982e-18 Identity = 30/57 (52.63%), Postives = 39/57 (68.42%), Query Frame = 3 Query: 120 GLRCTCHGWRSVYCIPKRACFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYG 290 G R C GWRSV+C PKRA F G +P +L D + Q RWA+G +E+ +SR+ PI YG Sbjct: 470 GYRLHCEGWRSVFCRPKRAAFCGDSPKSLIDVVSQQKRWAIGLLEVAISRYSPITYG 526 HSP 2 Score: 43.8986 bits (102), Expect = 1.982e-18 Identity = 18/41 (43.90%), Postives = 27/41 (65.85%), Query Frame = 2 Query: 11 LLKEAIQVISCGYEDKTEWGKEVGWIYGSVTEDILTGFKMH 133 +L A +V C YE T WG ++G+ YGS+ ED TG+++H Sbjct: 434 VLALAHRVAGCIYELNTNWGSKIGFRYGSLVEDYYTGYRLH 474
BLAST of CF504584 vs. ExPASy Swiss-Prot
Match: CSLG2_ARATH (Cellulose synthase-like protein G2 OS=Arabidopsis thaliana GN=CSLG2 PE=2 SV=1) HSP 1 Score: 60.077 bits (144), Expect = 7.815e-17 Identity = 24/57 (42.11%), Postives = 37/57 (64.91%), Query Frame = 3 Query: 120 GLRCTCHGWRSVYCIPKRACFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYG 290 G C GWRS++C P +A F G +P L+D + Q +RW++G +E+ SR+ P+ YG Sbjct: 441 GFMLHCEGWRSIFCSPTKAAFYGDSPKCLTDVIGQQIRWSVGLLEVAFSRYNPLTYG 497 HSP 2 Score: 46.2098 bits (108), Expect = 7.815e-17 Identity = 19/41 (46.34%), Postives = 25/41 (60.98%), Query Frame = 2 Query: 11 LLKEAIQVISCGYEDKTEWGKEVGWIYGSVTEDILTGFKMH 133 +L A V C YE T WG ++G+ YGS+ ED TGF +H Sbjct: 405 ILALAHDVAGCNYECNTNWGSKIGFRYGSLVEDYFTGFMLH 445
BLAST of CF504584 vs. ExPASy Swiss-Prot
Match: CSLG1_ARATH (Cellulose synthase-like protein G1 OS=Arabidopsis thaliana GN=CSLG1 PE=2 SV=1) HSP 1 Score: 61.2326 bits (147), Expect = 1.319e-16 Identity = 27/57 (47.37%), Postives = 36/57 (63.16%), Query Frame = 3 Query: 120 GLRCTCHGWRSVYCIPKRACFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYG 290 G C GWRSV+C PK+A F G +P L D + Q +RWA+G E+ S++ PI YG Sbjct: 451 GFMLHCEGWRSVFCNPKKAAFYGDSPKCLVDLVGQQIRWAVGLFEMSFSKYSPITYG 507 HSP 2 Score: 44.2838 bits (103), Expect = 1.319e-16 Identity = 19/41 (46.34%), Postives = 25/41 (60.98%), Query Frame = 2 Query: 11 LLKEAIQVISCGYEDKTEWGKEVGWIYGSVTEDILTGFKMH 133 +L A V C YE T WG ++G+ YGS+ ED TGF +H Sbjct: 415 VLSLAHNVAGCIYEYNTNWGSKIGFRYGSLVEDYYTGFMLH 455
BLAST of CF504584 vs. ExPASy Swiss-Prot
Match: CESAB_ORYSJ (Putative cellulose synthase A catalytic subunit 11 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA11 PE=2 SV=1) HSP 1 Score: 61.2326 bits (147), Expect = 2.222e-16 Identity = 25/42 (59.52%), Postives = 33/42 (78.57%), Query Frame = 2 Query: 8 SLLKEAIQVISCGYEDKTEWGKEVGWIYGSVTEDILTGFKMH 133 SLLKEAI V+SC +E++T WGKE+GW+YG + TGF+MH Sbjct: 518 SLLKEAIHVVSCAFEERTRWGKEIGWMYGG---GVATGFRMH 556 HSP 2 Score: 43.5134 bits (101), Expect = 2.222e-16 Identity = 23/58 (39.66%), Postives = 30/58 (51.72%), Query Frame = 3 Query: 120 GLRCTCHGWRSVYCIPKRACFKGSAPINLSDRLHQVLRWALGSVEIFLS-RHCPIWYG 290 G R GW S YC P R F+ A + +D L R A+ ++ I LS RH P+W G Sbjct: 552 GFRMHARGWSSAYCSPARPAFRRYARASPADVLAGASRRAVAAMGILLSRRHSPVWAG 609
BLAST of CF504584 vs. ExPASy Swiss-Prot
Match: CSLD4_ARATH (Cellulose synthase-like protein D4 OS=Arabidopsis thaliana GN=CSLD4 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 2.274e-15 Identity = 38/51 (74.51%), Postives = 41/51 (80.39%), Query Frame = 3 Query: 120 GLRCTCHGWRSVYCIPKRACFKGSAPINLSDRLHQVLRWALGSVEIFLSRH 272 G R GWRSVYCI KR F+GSAPINL+DRLHQVLRWA GSVEIF SR+ Sbjct: 813 GYRMHNRGWRSVYCITKRDSFRGSAPINLTDRLHQVLRWATGSVEIFFSRN 863 HSP 2 Score: 73.1738 bits (178), Expect = 4.742e-13 Identity = 36/74 (48.65%), Postives = 46/74 (62.16%), Query Frame = 2 Query: 5 ASLLKEAIQVISCGYEDKTEWGKEVGWIYGSVTEDILTGFKMH-LPWLEICILHSQTGLL*GISPHQSFRSSTP 223 A+ + E++ VISC YEDKTEWG VGWIYGSVTED++TG++MH W + I+ SFR S P Sbjct: 775 ATTVAESVSVISCWYEDKTEWGDRVGWIYGSVTEDVVTGYRMHNRGWRSVYC----------ITKRDSFRGSAP 838
BLAST of CF504584 vs. ExPASy Swiss-Prot
Match: CSLD1_ORYSJ (Cellulose synthase-like protein D1 OS=Oryza sativa subsp. japonica GN=CSLD1 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 5.602e-14 Identity = 34/51 (66.67%), Postives = 40/51 (78.43%), Query Frame = 3 Query: 120 GLRCTCHGWRSVYCIPKRACFKGSAPINLSDRLHQVLRWALGSVEIFLSRH 272 G R GW+SVYC+ R F+G+APINL+DRLHQVLRWA GSVEIF SR+ Sbjct: 832 GYRMHNRGWKSVYCVTHRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRN 882 HSP 2 Score: 75.485 bits (184), Expect = 9.555e-14 Identity = 33/55 (60.00%), Postives = 43/55 (78.18%), Query Frame = 2 Query: 5 ASLLKEAIQVISCGYEDKTEWGKEVGWIYGSVTEDILTGFKMH-LPWLEI-CILH 163 AS++ EAI V+SC YE+KTEWG VGWIYGSVTED++TG++MH W + C+ H Sbjct: 794 ASIVAEAISVVSCWYEEKTEWGTRVGWIYGSVTEDVVTGYRMHNRGWKSVYCVTH 848 The following BLAST results are available for this feature:
BLAST of CF504584 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 51
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504584 ID=CF504584; Name=CF504584; organism=Citrus sinensis; type=EST; length=296bpback to top |