CF504591
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504591 vs. ExPASy Swiss-Prot
Match: DCAM_ORYSJ (S-adenosylmethionine decarboxylase proenzyme OS=Oryza sativa subsp. japonica GN=SAMDC PE=2 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 2.849e-45 Identity = 86/144 (59.72%), Postives = 109/144 (75.69%), Query Frame = 1 Query: 1 PHRNFSEEVSVLDSYFGKLVSGSNAYIIGGSGKP-QKWHVYSASAEPLISSDPVFTIEMCLTGLDREMASVFYKTQSGS----AGAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVEGAAISTVHVTPEDGFSYASFETVGYD 417 PHR+FSEEV+VL+ YFG L SG NAY+IG KP QKWH+Y A+ P P+ T+EMC+TGLD+E ASVF+KT + A MT SGI I+P+ +ICDF+F+PCGYSMN++ G+A ST+HVTPEDGFSYAS+E VG+D Sbjct: 134 PHRSFSEEVAVLNRYFGHLKSGGNAYVIGDPAKPGQKWHIYYATQHP---EQPMVTLEMCMTGLDKEKASVFFKTSADGHTSCAKEMTKLSGISDIIPEMEICDFDFEPCGYSMNAIHGSAFSTIHVTPEDGFSYASYEVVGFD 274
BLAST of CF504591 vs. ExPASy Swiss-Prot
Match: DCAM_ORYSI (S-adenosylmethionine decarboxylase proenzyme OS=Oryza sativa subsp. indica GN=SAMDC PE=2 SV=2) HSP 1 Score: 179.489 bits (454), Expect = 4.860e-45 Identity = 86/144 (59.72%), Postives = 108/144 (75.00%), Query Frame = 1 Query: 1 PHRNFSEEVSVLDSYFGKLVSGSNAYIIGGSGKP-QKWHVYSASAEPLISSDPVFTIEMCLTGLDREMASVFYKTQSGS----AGAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVEGAAISTVHVTPEDGFSYASFETVGYD 417 PHR+FSEEV+VL+ YFG L SG NAY+IG KP QKWH+Y A+ P P+ T+EMC+TGLD+E ASVF+KT + A MT SGI I+P+ +ICDF+F+PCGYSMN++ G A ST+HVTPEDGFSYAS+E VG+D Sbjct: 134 PHRSFSEEVAVLNRYFGHLKSGGNAYVIGDPAKPGQKWHIYYATQHP---EQPMVTLEMCMTGLDKEKASVFFKTSADGHTSCAKEMTKLSGISDIIPEMEICDFDFEPCGYSMNAIHGLAFSTIHVTPEDGFSYASYEVVGFD 274
BLAST of CF504591 vs. ExPASy Swiss-Prot
Match: DCAM_HORCH (S-adenosylmethionine decarboxylase proenzyme OS=Hordeum chilense GN=SAMDC PE=2 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 2.667e-43 Identity = 83/144 (57.64%), Postives = 106/144 (73.61%), Query Frame = 1 Query: 1 PHRNFSEEVSVLDSYFGKLVSGSNAYIIGGSGKP-QKWHVYSASAEPLISSDPVFTIEMCLTGLDREMASVFYKTQSGS----AGAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVEGAAISTVHVTPEDGFSYASFETVGYD 417 PHR+FSEEV VL+ YFG L SG NAY+IG KP QKWH+Y A+ +P P+ T+EMC+TGLD+ ASVF+KT + A MT SGI I+P+ ++CDF+F+PCGYSMN++ G+A ST+HVTPEDGFSYAS+E G D Sbjct: 127 PHRSFSEEVDVLNRYFGHLNSGGNAYVIGDPAKPGQKWHIYYATEQP---EQPMVTLEMCMTGLDKTKASVFFKTHADGHVSCAKEMTKLSGISDIIPEMEVCDFDFEPCGYSMNAINGSAFSTIHVTPEDGFSYASYEVQGMD 267
BLAST of CF504591 vs. ExPASy Swiss-Prot
Match: DCAM_MAIZE (S-adenosylmethionine decarboxylase proenzyme OS=Zea mays GN=SAMDC PE=2 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 1.463e-41 Identity = 80/144 (55.56%), Postives = 106/144 (73.61%), Query Frame = 1 Query: 1 PHRNFSEEVSVLDSYFGKLVSGSNAYIIGGSGKP-QKWHVYSASAEPLISSDPVFTIEMCLTGLDREMASVFYKTQSGS----AGAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVEGAAISTVHVTPEDGFSYASFETVGYD 417 PHR+FSEEV+ L+ YFG L SG NAY+IG +P QKWHV+ A+ P P+ +EMC+TGLD++ A VF+KT + A MT SGI +I+P+ +ICDF+F+PCGYSMN++ G+A ST+HVTPEDGFSYAS+E +G D Sbjct: 134 PHRSFSEEVAALNRYFGGLKSGGNAYVIGDPARPGQKWHVFYATEYP---EQPMVNLEMCMTGLDKKKACVFFKTNADGNTTCAKEMTKLSGISEIIPEMEICDFDFEPCGYSMNAIHGSAFSTIHVTPEDGFSYASYEVMGLD 274
BLAST of CF504591 vs. ExPASy Swiss-Prot
Match: DCAM_DROME (S-adenosylmethionine decarboxylase proenzyme OS=Drosophila melanogaster GN=SamDC PE=1 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 4.003e-23 Identity = 62/148 (41.89%), Postives = 82/148 (55.41%), Query Frame = 1 Query: 1 PHRNFSEEVSVLDSYFGKLVSGSNAYIIGGSGKPQKWHVYSASAEPL------------ISSDPVFTIEMCLTGLDREMASVFYKTQSGSAGAMTVNSGIRKILPDSKICDFEFDPCGYSMNSV-EGAAISTVHVTPEDGFSYASFET 405 PH+ F+EEV+ LDS F +Y +G S + W++Y+ S + + SDP TIE+ + LD E S+FYK + A TV SGI ILP I DF FDPCGYSMN + + T+H+TPE+ FSY SFET Sbjct: 123 PHQGFTEEVTYLDSIF----PNGRSYCLG-SMNLECWYLYTFSRSDIKITPQLISDEKNVDSDPDQTIEILMQDLDPETMSIFYKNKFNDANGATVKSGIDTILPTMHIDDFLFDPCGYSMNGINDKGEYMTIHITPENQFSYVSFET 265
BLAST of CF504591 vs. ExPASy Swiss-Prot
Match: DCAM_DICDI (S-adenosylmethionine decarboxylase proenzyme OS=Dictyostelium discoideum GN=amd1 PE=3 SV=3) HSP 1 Score: 93.5893 bits (231), Expect = 3.507e-19 Identity = 55/137 (40.15%), Postives = 75/137 (54.74%), Query Frame = 1 Query: 1 PHRNFSEEVSVLDSYFGKLVSGSNAYIIGGSGKPQKWHVYSAS--AEPLISSDPVFTIEMCLTGLDREMASVFYKTQSGSAGAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVEGAAISTVHVTPEDGFSYASFET 405 PH +FS+EV+ L+ F AY++G K W++Y A P + T E+ + LD + F+K + SA TVNSGI +LP S I DF+FDPCGYSMN + T+H+TPE SY SF+T Sbjct: 152 PHCSFSDEVNFLNKIFD-----GQAYVMGDVNKDH-WNLYIADFRKNPTLQRTEQ-TFEVMMHDLDETVMKQFFKREGVSAWDTTVNSGIADLLPGSMIDDFQFDPCGYSMNGLLNEFYWTIHITPESHCSYVSFDT 281
BLAST of CF504591 vs. ExPASy Swiss-Prot
Match: DCAM_HUMAN (S-adenosylmethionine decarboxylase proenzyme OS=Homo sapiens GN=AMD1 PE=1 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 3.283e-17 Identity = 52/137 (37.96%), Postives = 74/137 (54.01%), Query Frame = 1 Query: 1 PHRNFSEEVSVLDSYFGKLVSGSNAYIIGGSGKPQKWHVYSAS-AEPLISSDPVFTIEMCLTGLDREMASVFYKTQSGSAGAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVEG-AAISTVHVTPEDGFSYASFET 405 PHRNF EE+ L++ F AY +G W++Y+ E + S P T+E+ ++ LD + FY +A +T SGIR ++P S I F+PCGYSMN ++ T+H+TPE FSY SFET Sbjct: 126 PHRNFQEEIEFLNAIF----PNGAAYCMGRMNS-DCWYLYTLDFPESRVISQPDQTLEILMSELDPAVMDQFYMKDGVTAKDVTRESGIRDLIPGSVIDATMFNPCGYSMNGMKSDGTYWTIHITPEPEFSYVSFET 257
BLAST of CF504591 vs. ExPASy Swiss-Prot
Match: DCAM1_MOUSE (S-adenosylmethionine decarboxylase proenzyme 1 OS=Mus musculus GN=Amd1 PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 4.287e-17 Identity = 52/137 (37.96%), Postives = 74/137 (54.01%), Query Frame = 1 Query: 1 PHRNFSEEVSVLDSYFGKLVSGSNAYIIGGSGKPQKWHVYSAS-AEPLISSDPVFTIEMCLTGLDREMASVFYKTQSGSAGAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVEG-AAISTVHVTPEDGFSYASFET 405 PHRNF EE+ L++ F AY +G W++Y+ E + S P T+E+ ++ LD + FY +A +T SGIR ++P S I F+PCGYSMN ++ T+H+TPE FSY SFET Sbjct: 126 PHRNFQEEIEFLNAIF----PNGAAYCMGRMNS-DCWYLYTLDFPESRVISQPDQTLEILMSELDPAVMDQFYMKDGVTAKDVTRESGIRDLIPGSVIDATLFNPCGYSMNGMKSDGTYWTIHITPEPEFSYVSFET 257
BLAST of CF504591 vs. ExPASy Swiss-Prot
Match: DCAM_CAEEL (S-adenosylmethionine decarboxylase proenzyme OS=Caenorhabditis elegans GN=smd-1 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 7.313e-17 Identity = 55/139 (39.57%), Postives = 80/139 (57.55%), Query Frame = 1 Query: 4 HRNFSEEVSVLDSYFGKLVSGSNAYIIGGSGKPQKWHVYSASAEPLISS--DPVFTIEMCLTGLDREMASVFYKTQSGSAGAMTVNSGIRKILP-DSKICDFEFDPCGYSMNSV--EGAAISTVHVTPEDGFSYASFET 405 H+NF EV LDS+F V G +AY +G S K +W++Y+ E + P T+E+ ++ LD E+ F K + + +GI KI+P + + D FDPCGYSMN+ + +T+HVTPE FS+ASFET Sbjct: 142 HKNFDAEVEYLDSFF---VDG-HAYCLG-SLKQDRWYLYTFHREVEFPAHKQPDHTLEILMSDLDEEVLHKFTKDYAVDGNDCFMRAGIDKIIPAGADVHDELFDPCGYSMNAYMNDTDQYATIHVTPEKAFSFASFET 275
BLAST of CF504591 vs. ExPASy Swiss-Prot
Match: DCAM_BOVIN (S-adenosylmethionine decarboxylase proenzyme OS=Bos taurus GN=AMD1 PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 7.313e-17 Identity = 51/137 (37.23%), Postives = 74/137 (54.01%), Query Frame = 1 Query: 1 PHRNFSEEVSVLDSYFGKLVSGSNAYIIGGSGKPQKWHVYSAS-AEPLISSDPVFTIEMCLTGLDREMASVFYKTQSGSAGAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVEG-AAISTVHVTPEDGFSYASFET 405 PHRNF EE+ L++ F AY +G W++Y+ E + + P T+E+ ++ LD + FY +A +T SGIR ++P S I F+PCGYSMN ++ T+H+TPE FSY SFET Sbjct: 126 PHRNFQEEIEFLNAIF----PNGAAYCMGRMNS-DCWYLYTLDFPESRVINQPDQTLEILMSELDPAVMDQFYMKDGVTAKDVTRESGIRDLIPGSVIDATMFNPCGYSMNGMKSDGTYWTIHITPEPEFSYVSFET 257 The following BLAST results are available for this feature:
BLAST of CF504591 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504591 ID=CF504591; Name=CF504591; organism=Citrus sinensis; type=EST; length=427bpback to top |