CF504591
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504591 vs. ExPASy Swiss-Prot
Match: DCAM_RAT (S-adenosylmethionine decarboxylase proenzyme OS=Rattus norvegicus GN=Amd1 PE=2 SV=3) HSP 1 Score: 85.5001 bits (210), Expect = 9.551e-17 Identity = 51/137 (37.23%), Postives = 74/137 (54.01%), Query Frame = 1 Query: 1 PHRNFSEEVSVLDSYFGKLVSGSNAYIIGGSGKPQKWHVYSASA-EPLISSDPVFTIEMCLTGLDREMASVFYKTQSGSAGAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVEG-AAISTVHVTPEDGFSYASFET 405 PHRNF EE+ L++ F AY +G W++Y+ E + + P T+E+ ++ LD + FY +A +T SGIR ++P S I F+PCGYSMN ++ T+H+TPE FSY SFET Sbjct: 126 PHRNFQEEIEFLNAIF----PNGAAYCMGRMNS-DCWYLYTLDLPESRVINQPDQTLEILMSELDPAVMDQFYMKDGVTAKDVTRESGIRDLIPGSVIDATLFNPCGYSMNGMKSDGTYWTIHITPEPEFSYVSFET 257
BLAST of CF504591 vs. ExPASy Swiss-Prot
Match: DCAM_MESAU (S-adenosylmethionine decarboxylase proenzyme OS=Mesocricetus auratus GN=AMD1 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 9.551e-17 Identity = 51/137 (37.23%), Postives = 74/137 (54.01%), Query Frame = 1 Query: 1 PHRNFSEEVSVLDSYFGKLVSGSNAYIIGGSGKPQKWHVYSAS-AEPLISSDPVFTIEMCLTGLDREMASVFYKTQSGSAGAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVEG-AAISTVHVTPEDGFSYASFET 405 PHRNF EE+ L++ F AY +G W++Y+ E + + P T+E+ ++ LD + FY +A +T SGIR ++P S I F+PCGYSMN ++ T+H+TPE FSY SFET Sbjct: 126 PHRNFQEEIEFLNAIF----PNGAAYCMGRMNS-DCWYLYTLDFPESRVINQPDQTLEILMSELDPAVMDQFYMKDGVTAKDVTRESGIRDLIPGSVIDATLFNPCGYSMNGMKSDGTYWTIHITPEPEFSYVSFET 257
BLAST of CF504591 vs. ExPASy Swiss-Prot
Match: DCAM2_MUSSP (S-adenosylmethionine decarboxylase proenzyme 2 OS=Mus spretus GN=Amd2 PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 9.551e-17 Identity = 52/137 (37.96%), Postives = 73/137 (53.28%), Query Frame = 1 Query: 1 PHRNFSEEVSVLDSYFGKLVSGSNAYIIGGSGKPQKWHVYSAS-AEPLISSDPVFTIEMCLTGLDREMASVFYKTQSGSAGAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVEG-AAISTVHVTPEDGFSYASFET 405 PHRNF EE+ L+ F AY +G W++Y+ E + S P T+E+ ++ LD + FY +A +T SGIR ++P S I F+PCGYSMN ++ T+H+TPE FSY SFET Sbjct: 126 PHRNFQEEIEFLNVIF----PNGAAYCMGRMNS-DCWYLYTLDFPESRVISQPDQTLEILMSELDPAVMDQFYMKDGVTAKDVTRESGIRDLIPGSVIDATLFNPCGYSMNGMKSDGTYWTIHITPEPEFSYVSFET 257
BLAST of CF504591 vs. ExPASy Swiss-Prot
Match: DCAM2_MOUSE (S-adenosylmethionine decarboxylase proenzyme 2 OS=Mus musculus GN=Amd2 PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 9.551e-17 Identity = 52/137 (37.96%), Postives = 73/137 (53.28%), Query Frame = 1 Query: 1 PHRNFSEEVSVLDSYFGKLVSGSNAYIIGGSGKPQKWHVYSAS-AEPLISSDPVFTIEMCLTGLDREMASVFYKTQSGSAGAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVEG-AAISTVHVTPEDGFSYASFET 405 PHRNF EE+ L+ F AY +G W++Y+ E + S P T+E+ ++ LD + FY +A +T SGIR ++P S I F+PCGYSMN ++ T+H+TPE FSY SFET Sbjct: 126 PHRNFQEEIEFLNVIF----PNGAAYCMGRMNS-DCWYLYTLDFPESRVISQPDQTLEILMSELDPAVMDQFYMKDGVTAKDVTRESGIRDLIPGSVIDATLFNPCGYSMNGMKSDGTYWTIHITPEPEFSYVSFET 257
BLAST of CF504591 vs. ExPASy Swiss-Prot
Match: DCAM_XENLA (S-adenosylmethionine decarboxylase proenzyme OS=Xenopus laevis GN=amd1 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.247e-16 Identity = 52/137 (37.96%), Postives = 73/137 (53.28%), Query Frame = 1 Query: 1 PHRNFSEEVSVLDSYFGKLVSGSNAYIIGGSGKPQKWHVYSASA-EPLISSDPVFTIEMCLTGLDREMASVFYKTQSGSAGAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVEG-AAISTVHVTPEDGFSYASFET 405 PHRNF EEV L+ F AY +G W++Y+ + + S P T+E+ ++ LD E+ FY + +A +T SGIR ++ S I F PCGYSMN ++ T+H+TPE FSY SFET Sbjct: 128 PHRNFHEEVEFLNQIF----PNGAAYCMGRINS-DCWYLYTLDIPDEYVISQPDQTLEILMSELDPEVMDQFYMKEGVTANDVTRVSGIRDLITGSVIDATMFSPCGYSMNGMKSDGTYWTIHITPEPDFSYVSFET 259
BLAST of CF504591 vs. ExPASy Swiss-Prot
Match: DCAM_ONCVO (S-adenosylmethionine decarboxylase proenzyme OS=Onchocerca volvulus GN=smd-1 PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 6.844e-15 Identity = 48/138 (34.78%), Postives = 68/138 (49.28%), Query Frame = 1 Query: 1 PHRNFSEEVSVLDSYFGKLVSGSNAYIIGGSGKPQKWHVYSASAEPLISSDPVFTIEMCLTGLDREMASVFYKTQSGSAGAMTVNSGIRKILPDSKICDFE-FDPCGYSMNSV--EGAAISTVHVTPEDGFSYASFET 405 PH +F EV L+ +F +G +AY IG + +W +Y+ + P T+E+ + GL ++ S F S + S I ILP + E F PCGYS+N + T+HVTPE FSY SFET Sbjct: 145 PHSSFETEVDYLEEHF----AGGSAYCIGPQ-RQDRWFLYTMVTPQAVFPFPEHTLEILMNGLPEDVLSTFSPNVSKDGKDCRMKSAINTILPPDIVVHEELFSPCGYSLNGLIPHSDHYITIHVTPEPDFSYVSFET 277
BLAST of CF504591 vs. ExPASy Swiss-Prot
Match: DCAM_TRYCR (S-adenosylmethionine decarboxylase proenzyme OS=Trypanosoma cruzi PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.434e-12 Identity = 45/141 (31.91%), Postives = 71/141 (50.35%), Query Frame = 1 Query: 1 PHRNFSEEVSVLDSYFGKLVSGSNAYIIGGSGKPQKW-HVYSASAEPLISSDPVFTIEMCLTGLDREMASVFYKTQSGSAGAMTVN----SGIRKILPDS-KICDFEFDPCGYSMNSVEGAAISTVHVTPEDGFSYASFET 405 PH + +EE + L +YF +I G + VY P + + + M + GLDR ++ + S G T + + K+ DS K+ D +F+PCGYS+N++ GA T+H+TPED S+AS+ET Sbjct: 142 PHLSMAEEFNTLRTYF----PSGKPFIFGPVDSDHYFLFVYDDVIRPCETENDT-QLSMTMYGLDRTQTKHWFSDRFISTGTETAAIRKATKLDKVADDSWKLHDLQFEPCGYSINTIRGAEYQTIHITPEDHCSFASYET 277
BLAST of CF504591 vs. ExPASy Swiss-Prot
Match: DCAM_TRYBB (S-adenosylmethionine decarboxylase proenzyme OS=Trypanosoma brucei brucei PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 9.251e-12 Identity = 45/142 (31.69%), Postives = 72/142 (50.70%), Query Frame = 1 Query: 1 PHRNFSEEVSVLDSYFGKLVSGSNAYIIGGSGKPQKWHVYSAS--AEPLISSDPVFTIEMCLTGLDREMASVFYKTQSGSAGAMTV----NSGIRKILPDSKIC-DFEFDPCGYSMNSVEGAAISTVHVTPEDGFSYASFET 405 PH + +EE L S+F S I G + +Y S +P S D + M + GLDR +Y + G T +G+ +++ DS I D +++PCGYS+N++ G+ T+H+TPE+ S+AS+ET Sbjct: 142 PHLSMAEEFKTLRSHFP-----SGQPFIFGPIDSDHYFLYLDSDVVQPSCSDDA--QLSMTMYGLDRNQTKHWYSDKMLPTGPETAVIREATGLSEVVDDSWILHDLQYEPCGYSINAIRGSEYQTIHITPEEHCSFASYET 276 The following BLAST results are available for this feature:
BLAST of CF504591 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF504591 ID=CF504591; Name=CF504591; organism=Citrus sinensis; type=EST; length=427bpback to top |