CF504605
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504605 vs. ExPASy Swiss-Prot
Match: PCKA_SHEWM (Phosphoenolpyruvate carboxykinase [ATP] OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=pckA PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 1.395e-27 Identity = 58/100 (58.00%), Postives = 71/100 (71.00%), Query Frame = 3 Query: 3 IDLSREKEPDIWNAIKFGAVLENVVFDEHTREVDYSDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTA 302 IDLS++ EP IWNAI+FG VLENVV DE+ R DY++ ++TEN+RAAYP+E+I K G P V+ L CD GVLPPVS L Q YHF+SGYTA Sbjct: 262 IDLSQKNEPVIWNAIRFGTVLENVVMDEN-RIPDYTNSTLTENSRAAYPLEHIELRKAENRGAEPHAVVFLTCDVSGVLPPVSILTKEQAAYHFLSGYTA 360 HSP 2 Score: 28.1054 bits (61), Expect = 1.395e-27 Identity = 12/31 (38.71%), Postives = 18/31 (58.06%), Query Frame = 2 Query: 338 ATFSACFGAAFIMLHPTKYAAMLAEKMQKHG 430 +TFS CFGA F YA +L ++++ G Sbjct: 375 STFSTCFGAPFFPRPAGVYAELLMKRIESFG 405
BLAST of CF504605 vs. ExPASy Swiss-Prot
Match: PCKA_PSEFS (Phosphoenolpyruvate carboxykinase [ATP] OS=Pseudomonas fluorescens (strain SBW25) GN=pckA PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 2.363e-27 Identity = 56/102 (54.90%), Postives = 71/102 (69.61%), Query Frame = 3 Query: 3 IDLSREKEPDIWNAIKFGAVLENVVFDEHTREVDYSDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALL 308 IDLS + EP IW AIK GAVLENVV D+ + DY++ S+T+N+RAAYP+E++ +G P VI L CD GVLPPVS L+ Q YHF+SGYTAL+ Sbjct: 262 IDLSEKNEPVIWKAIKHGAVLENVVIDD-AKHADYTNVSLTQNSRAAYPLEHVAKRSEKNLGGEPNAVIFLTCDLTGVLPPVSILSEEQAAYHFLSGYTALV 362 HSP 2 Score: 30.0314 bits (66), Expect = 2.363e-27 Identity = 16/41 (39.02%), Postives = 24/41 (58.54%), Query Frame = 2 Query: 308 GTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHG 430 G+ GIK +TFS CFGA F +YA +L ++++ G Sbjct: 368 GSGGGIK---STFSTCFGAPFFPRPAGEYAELLIKRIRGFG 405
BLAST of CF504605 vs. ExPASy Swiss-Prot
Match: PCKA_BAUCH (Phosphoenolpyruvate carboxykinase [ATP] OS=Baumannia cicadellinicola subsp. Homalodisca coagulata GN=pckA PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 4.002e-27 Identity = 45/103 (43.69%), Postives = 62/103 (60.19%), Query Frame = 3 Query: 3 IDLSREKEPDIWNAIKFGAVLENVVFDEHTREVDYSDKSVTENTRAAYPIEYIPNAKIPC-VGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALL 308 I+L E EP+I+ AI+ A+LENV+ V+Y D S T+N R +YP+ +I N P H +I L DAFGVLPPV+ L Q Y+F+SG++A L Sbjct: 288 INLKPELEPEIFQAIRCNALLENVMV-RADGSVNYHDNSKTDNARVSYPLNHIKNRVQPVSCASHASTIIFLTADAFGVLPPVATLTNEQAQYYFLSGFSAKL 389 HSP 2 Score: 58.151 bits (139), Expect = 4.002e-27 Identity = 27/42 (64.29%), Postives = 32/42 (76.19%), Query Frame = 2 Query: 305 AGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHG 430 +GTE GI P TFSACFGAAF+ LHPT YAA+LA++M G Sbjct: 390 SGTERGIISPVPTFSACFGAAFLALHPTVYAALLAKRMNIAG 431
BLAST of CF504605 vs. ExPASy Swiss-Prot
Match: PCKA_PSEHT (Phosphoenolpyruvate carboxykinase [ATP] OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=pckA PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 2.536e-26 Identity = 53/100 (53.00%), Postives = 71/100 (71.00%), Query Frame = 3 Query: 3 IDLSREKEPDIWNAIKFGAVLENVVFDEHTREVDYSDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTA 302 IDLS++ EP IW+AI+FG +LENVV DE+ R D++D S+T+N+RAAYP+E++ K+ PK V+ L CD GVLPPVS L +HF+SGYTA Sbjct: 261 IDLSQKNEPVIWDAIRFGTILENVVLDEN-RVPDFNDTSLTQNSRAAYPLEHVEKRKVENRAGEPKAVVFLTCDVSGVLPPVSILTEEAAAFHFLSGYTA 359 HSP 2 Score: 28.1054 bits (61), Expect = 2.536e-26 Identity = 12/31 (38.71%), Postives = 19/31 (61.29%), Query Frame = 2 Query: 338 ATFSACFGAAFIMLHPTKYAAMLAEKMQKHG 430 +TFS CFGA F YA +L +++++ G Sbjct: 374 STFSTCFGAPFFPRPAGVYAELLMKRVREFG 404 The following BLAST results are available for this feature:
BLAST of CF504605 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 284
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504605 ID=CF504605; Name=CF504605; organism=Citrus sinensis; type=EST; length=431bpback to top |