CF504613
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504613 vs. ExPASy Swiss-Prot
Match: AL1A1_HUMAN (Retinal dehydrogenase 1 OS=Homo sapiens GN=ALDH1A1 PE=1 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 1.577e-33 Identity = 37/72 (51.39%), Postives = 49/72 (68.06%), Query Frame = 1 Query: 340 LAALETWNNGKPYVQSLKSEVPMVVRLLHYYLGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLL 555 LA +E+ N GK Y + +++ ++ L Y GWADKI G T+P DGN+ T HEPIGV GQI+PWNFPL+ Sbjct: 103 LATMESMNGGKLYSNAYLNDLAGCIKTLRYCAGWADKIQGRTIPIDGNFFTYTRHEPIGVCGQIIPWNFPLV 174 HSP 2 Score: 77.7962 bits (190), Expect = 1.577e-33 Identity = 39/82 (47.56%), Postives = 53/82 (64.63%), Query Frame = 2 Query: 86 KLVTPKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEK 328 K+ K IN ++ D+ SGK FPV++P T E + V EGD ED+D+AV AR+AF G PW M ER R++ + ADLIE+ Sbjct: 17 KIQYTKIFINNEWHDSVSGKKFPVFNPATEEELCQVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLYKLADLIER 98
BLAST of CF504613 vs. ExPASy Swiss-Prot
Match: AL1A1_MACFA (Retinal dehydrogenase 1 OS=Macaca fascicularis GN=ALDH1A1 PE=2 SV=3) HSP 1 Score: 85.1149 bits (209), Expect = 3.484e-33 Identity = 37/72 (51.39%), Postives = 49/72 (68.06%), Query Frame = 1 Query: 340 LAALETWNNGKPYVQSLKSEVPMVVRLLHYYLGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLL 555 LA +E+ N GK Y + +++ ++ L Y GWADKI G T+P DGN+ T HEPIGV GQI+PWNFPL+ Sbjct: 103 LATMESMNGGKLYSNAYLNDLAGCIKTLRYCAGWADKIQGRTIPIDGNFFTYTRHEPIGVCGQIIPWNFPLV 174 HSP 2 Score: 76.6406 bits (187), Expect = 3.484e-33 Identity = 42/101 (41.58%), Postives = 61/101 (60.40%), Query Frame = 2 Query: 29 ASAGLAQLLLLKSQSFHLFKLVTPKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEK 328 +S+G + L +L + K+ K IN ++ D+ SGK FPV++P T E + V EGD D+D+AV AR+AF G PW M ER R++ + ADLIE+ Sbjct: 2 SSSGTSDLPVLPTD----LKIQYTKIFINNEWHDSVSGKKFPVFNPATEEELCQVEEGDKADVDKAVKAARQAFQIGSPWRTMDASERGRLLYKLADLIER 98
BLAST of CF504613 vs. ExPASy Swiss-Prot
Match: AL1A1_HORSE (Retinal dehydrogenase 1 OS=Equus caballus GN=ALDH1A1 PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.305e-32 Identity = 36/72 (50.00%), Postives = 48/72 (66.67%), Query Frame = 1 Query: 340 LAALETWNNGKPYVQSLKSEVPMVVRLLHYYLGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLL 555 LA +E+ N GK + + ++ ++ L Y GWADKI G T+P DGN+ T HEP+GV GQI+PWNFPLL Sbjct: 102 LATMESMNGGKLFSNAYLMDLGGCLKTLRYCAGWADKIQGRTIPSDGNFFTYTRHEPVGVCGQILPWNFPLL 173 HSP 2 Score: 76.6406 bits (187), Expect = 1.305e-32 Identity = 37/77 (48.05%), Postives = 52/77 (67.53%), Query Frame = 2 Query: 101 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEK 328 K IN ++ D+ SGK FPV++P T E + V EGD ED+++AVA AR+AF G PW M ER R++ + ADL+E+ Sbjct: 21 KIFINNEWHDSVSGKKFPVFNPATEEKLCEVEEGDKEDVNKAVAAARQAFQIGSPWRTMDASERGRLLYKLADLVER 97
BLAST of CF504613 vs. ExPASy Swiss-Prot
Match: AL1A1_RAT (Retinal dehydrogenase 1 OS=Rattus norvegicus GN=Aldh1a1 PE=1 SV=3) HSP 1 Score: 82.0333 bits (201), Expect = 6.366e-32 Identity = 37/72 (51.39%), Postives = 47/72 (65.28%), Query Frame = 1 Query: 340 LAALETWNNGKPYVQSLKSEVPMVVRLLHYYLGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLL 555 LA +E N GK + + S++ ++ L Y GWADKIHG T+P DG+ T EPIGV GQI+PWNFPLL Sbjct: 103 LATIEAINGGKVFANAYLSDLGGSIKALKYCAGWADKIHGQTIPSDGDIFTFTRREPIGVCGQIIPWNFPLL 174 HSP 2 Score: 75.485 bits (184), Expect = 6.366e-32 Identity = 39/82 (47.56%), Postives = 53/82 (64.63%), Query Frame = 2 Query: 86 KLVTPKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEK 328 K+ K IN ++ D+ SGK FPV +P T EVI +V EGD D+D+AV AR+AF G PW M ER R++ + ADL+E+ Sbjct: 17 KIQHTKIFINNEWHDSVSGKKFPVLNPATEEVICHVEEGDKADVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLMER 98
BLAST of CF504613 vs. ExPASy Swiss-Prot
Match: AL1A7_MOUSE (Aldehyde dehydrogenase, cytosolic 1 OS=Mus musculus GN=Aldh1a7 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.290e-32 Identity = 36/72 (50.00%), Postives = 48/72 (66.67%), Query Frame = 1 Query: 340 LAALETWNNGKPYVQSLKSEVPMVVRLLHYYLGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLL 555 LA +E+ N GK + + +V + ++ L Y+ GWADKIHG T+P DGN T EPIGV GQI+PWN PL+ Sbjct: 103 LATMESMNAGKVFAHAYLLDVEISIKALQYFAGWADKIHGQTIPSDGNIFTYTRREPIGVCGQIIPWNGPLI 174 HSP 2 Score: 73.1738 bits (178), Expect = 8.290e-32 Identity = 38/82 (46.34%), Postives = 52/82 (63.41%), Query Frame = 2 Query: 86 KLVTPKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEK 328 K+ K IN ++ D+ S K FPV +P T EVI +V EGD D+D+AV AR+AF G PW M ER R++ + ADL+E+ Sbjct: 17 KIQHTKIFINNEWHDSVSSKKFPVLNPATEEVICHVEEGDKADVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLMER 98
BLAST of CF504613 vs. ExPASy Swiss-Prot
Match: AL1A1_CHICK (Retinal dehydrogenase 1 OS=Gallus gallus GN=ALDH1A1 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.406e-31 Identity = 35/72 (48.61%), Postives = 48/72 (66.67%), Query Frame = 1 Query: 340 LAALETWNNGKPYVQSLKSEVPMVVRLLHYYLGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLL 555 LA +E + GK + + ++ ++ + Y GWADKIHG TVP DGN+ T HEP+GV GQI+PWNFPL+ Sbjct: 111 LATMEAIDGGKLFSTAYLMDLGACIKTIRYCAGWADKIHGRTVPMDGNFFTFTRHEPVGVCGQIIPWNFPLV 182 HSP 2 Score: 74.7146 bits (182), Expect = 1.406e-31 Identity = 39/82 (47.56%), Postives = 52/82 (63.41%), Query Frame = 2 Query: 86 KLVTPKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEK 328 K+ K IN ++ D+ SGK F V++P E I VAEGD DID+AV ARKAF+ G PW M ER R++ + ADL+E+ Sbjct: 25 KIKYTKIFINNEWHDSVSGKKFEVFNPANEEKICEVAEGDKADIDKAVKAARKAFELGSPWRTMDASERGRLLNKLADLVER 106
BLAST of CF504613 vs. ExPASy Swiss-Prot
Match: AL1A1_MOUSE (Retinal dehydrogenase 1 OS=Mus musculus GN=Aldh1a1 PE=1 SV=5) HSP 1 Score: 82.8037 bits (203), Expect = 1.406e-31 Identity = 36/72 (50.00%), Postives = 47/72 (65.28%), Query Frame = 1 Query: 340 LAALETWNNGKPYVQSLKSEVPMVVRLLHYYLGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLL 555 LA +E N GK + + S++ ++ L Y GWADKIHG T+P DG+ T EPIGV GQI+PWNFP+L Sbjct: 103 LATMEALNGGKVFANAYLSDLGGCIKALKYCAGWADKIHGQTIPSDGDIFTYTRREPIGVCGQIIPWNFPML 174 HSP 2 Score: 73.559 bits (179), Expect = 1.406e-31 Identity = 38/82 (46.34%), Postives = 53/82 (64.63%), Query Frame = 2 Query: 86 KLVTPKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEK 328 K+ K IN ++ ++ SGK FPV +P T EVI +V EGD D+D+AV AR+AF G PW M ER R++ + ADL+E+ Sbjct: 17 KIQHTKIFINNEWHNSVSGKKFPVLNPATEEVICHVEEGDKADVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLMER 98
BLAST of CF504613 vs. ExPASy Swiss-Prot
Match: ALDH_ENCBU (Aldehyde dehydrogenase OS=Enchytraeus buchholzi GN=ALDH PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.384e-31 Identity = 38/72 (52.78%), Postives = 47/72 (65.28%), Query Frame = 1 Query: 337 ELAALETWNNGKPYVQSLKSEVPMVVRLLHYYLGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPL 552 +L LET +NGKP+ S + M ++L YY G+ADKI G T+P DGN T HEP+GV G I PWNFPL Sbjct: 99 QLRTLETLDNGKPFAMSYLGDTLMAQKVLRYYAGFADKIVGQTIPADGNVFCYTRHEPVGVVGAITPWNFPL 170 HSP 2 Score: 70.0922 bits (170), Expect = 2.384e-31 Identity = 38/81 (46.91%), Postives = 50/81 (61.73%), Query Frame = 2 Query: 86 KLVTPKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFD-EGPWPKMTPYERSRIMLRAADLIE 325 K+ K IN +FVD+ SGKTF +P T E +A V EGD DID+AVA AR AF + + K +R R++ + ADLIE Sbjct: 14 KVEFTKIFINNEFVDSVSGKTFATINPSTGEKLAEVQEGDKADIDKAVAAARAAFKRDAEYRKHDASDRGRLLFKLADLIE 94
BLAST of CF504613 vs. ExPASy Swiss-Prot
Match: AL2B4_ARATH (Aldehyde dehydrogenase family 2 member B4, mitochondrial OS=Arabidopsis thaliana GN=ALDH2B4 PE=1 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 4.650e-31 Identity = 57/77 (74.03%), Postives = 66/77 (85.71%), Query Frame = 1 Query: 325 ENMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYLGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLL 555 ++ EELA+LETW+NGKPY QSL +E+PM RL YY GWADKIHGLT+P DGNY + TLHEPIGVAGQI+PWNFPLL Sbjct: 134 KHSEELASLETWDNGKPYQQSLTAEIPMFARLFRYYAGWADKIHGLTIPADGNYQVHTLHEPIGVAGQIIPWNFPLL 210 HSP 2 Score: 125.176 bits (313), Expect = 2.131e-28 Identity = 67/112 (59.82%), Postives = 77/112 (68.75%), Query Frame = 2 Query: 107 LINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEK---TWRSWQLWRHG-------TMESPMYNLSNLKYQWW 412 LING FVD+ASGKTFP DPRT EVIA+VAEGDAEDI+RAV AR AFDEGPWPKM+ YERSR++LR ADL+EK S + W +G T E PM+ Y W Sbjct: 61 LINGNFVDSASGKTFPTLDPRTGEVIAHVAEGDAEDINRAVKAARTAFDEGPWPKMSAYERSRVLLRFADLVEKHSEELASLETWDNGKPYQQSLTAEIPMFARLFRYYAGW 172
BLAST of CF504613 vs. ExPASy Swiss-Prot
Match: ALDH1_MACPR (Aldehyde dehydrogenase, cytosolic 1 OS=Macroscelides proboscideus GN=ALDH1 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 6.854e-31 Identity = 39/82 (47.56%), Postives = 53/82 (64.63%), Query Frame = 2 Query: 86 KLVTPKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEK 328 K+ K IN ++ D+ SGKTFPV++P T E I V E D ED+D+AV AR+AF G PW M ER +++ + ADLIE+ Sbjct: 17 KIQHTKLFINNEWHDSVSGKTFPVFNPATEEKICEVEEADKEDVDKAVKAAREAFQMGSPWRTMDASERGQLIYKLADLIER 98 HSP 2 Score: 77.0258 bits (188), Expect = 6.854e-31 Identity = 34/72 (47.22%), Postives = 46/72 (63.89%), Query Frame = 1 Query: 340 LAALETWNNGKPYVQSLKSEVPMVVRLLHYYLGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPLL 555 LA LE+ N GK + + ++ +++L Y GWADKI G T+P DG + T HEPIGV GQI PWN P++ Sbjct: 103 LATLESINAGKIFASAYLMDLDYCIKVLRYCAGWADKIQGRTIPVDGEFFSYTRHEPIGVCGQIFPWNAPMI 174 The following BLAST results are available for this feature:
BLAST of CF504613 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 196
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504613 ID=CF504613; Name=CF504613; organism=Citrus sinensis; type=EST; length=555bpback to top |