CF504613

Overview
NameCF504613
Unique NameCF504613
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length555
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF504613 vs. ExPASy Swiss-Prot
Match: ALDH_CLAHE (Aldehyde dehydrogenase OS=Cladosporium herbarum GN=CLAH10 PE=1 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 1.661e-25
Identity = 40/80 (50.00%), Postives = 50/80 (62.50%), Query Frame = 1 
Query:  325 ENMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYLGWADKIHGL---TVPGDGNYHIQTLHEPIGVAGQIVPWNFPLL 555
            +N++ LAA+E+ +NGK  +   K ++ M V  L YY GWADKI G    T P   NY      EPIGV GQI+PWNFPLL
Sbjct:   93 KNIDLLAAVESLDNGKA-ISMAKGDISMCVGCLRYYGGWADKITGKVIDTTPDTFNY---VKKEPIGVCGQIIPWNFPLL 168

HSP 2 Score: 64.3142 bits (155), Expect = 1.661e-25
Identity = 38/85 (44.71%), Postives = 47/85 (55.29%), Query Frame = 2 
Query:   77 HLFKLVTPKNL-INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEK 328
            H  K   P  L IN +FV    GKTF V +P    VI  V E   +D+D AVA ARKAF EG W + TP  R +++   A+L EK
Sbjct:   10 HSGKYEQPTGLFINNEFVKGQEGKTFDVINPSDESVITQVHEATEKDVDIAVAAARKAF-EGSWRQETPENRGKLLNNLANLFEK 93
[Close]
BLAST of CF504613 vs. ExPASy Swiss-Prot
Match: FTHFD_MOUSE (10-formyltetrahydrofolate dehydrogenase OS=Mus musculus GN=Aldh1l1 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.627e-25
Identity = 32/81 (39.51%), Postives = 49/81 (60.49%), Query Frame = 1 
Query:  325 ENMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYLGWADKIHGLTVP---GDGNYHIQ-TLHEPIGVAGQIVPWNFPLL 555
            ++ EELA +E  + G  Y  +LK+ V M ++   Y+ GW DKI G T+P      N ++  T  EP+GV G ++PWN+PL+
Sbjct:  498 QHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLM 578

HSP 2 Score: 66.6254 bits (161), Expect = 3.627e-25
Identity = 30/73 (41.10%), Postives = 45/73 (61.64%), Query Frame = 2 
Query:  110 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEK 328
            I G+FVDA   KT+   +P    VI  V+     D+D+AVA A++AF+ G W K+   +R R++ R ADL+E+
Sbjct:  426 IGGEFVDAEGAKTYSTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADLMEQ 498
[Close]
BLAST of CF504613 vs. ExPASy Swiss-Prot
Match: FTHFD_PONAB (10-formyltetrahydrofolate dehydrogenase OS=Pongo abelii GN=ALDH1L1 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.721e-25
Identity = 33/81 (40.74%), Postives = 49/81 (60.49%), Query Frame = 1 
Query:  325 ENMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYLGWADKIHGLTVP---GDGNYHIQ-TLHEPIGVAGQIVPWNFPLL 555
            ++ EELA +E  + G  Y  +LK+ V M ++   Y+ GW DKI G T+P      N ++  T  EP+GV G I+PWN+PL+
Sbjct:  498 QHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGSTIPINQARPNRNLTLTRKEPVGVCGIIIPWNYPLM 578

HSP 2 Score: 66.2402 bits (160), Expect = 4.721e-25
Identity = 30/73 (41.10%), Postives = 45/73 (61.64%), Query Frame = 2 
Query:  110 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEK 328
            I G+FVDA   KT+   +P    VI  V+     D+D+AVA A+ AF+ G W K++  +R R++ R ADL+E+
Sbjct:  426 IGGEFVDAEGAKTYETINPTDGSVICQVSLAQVTDVDKAVAAAKDAFENGRWGKISARDRGRLLYRLADLMEQ 498
[Close]
BLAST of CF504613 vs. ExPASy Swiss-Prot
Match: FTHFD_RAT (10-formyltetrahydrofolate dehydrogenase OS=Rattus norvegicus GN=Aldh1l1 PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 6.143e-25
Identity = 32/81 (39.51%), Postives = 49/81 (60.49%), Query Frame = 1 
Query:  325 ENMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYLGWADKIHGLTVP---GDGNYHIQ-TLHEPIGVAGQIVPWNFPLL 555
            ++ EELA +E  + G  Y  +LK+ V M ++   Y+ GW DKI G T+P      N ++  T  EP+GV G ++PWN+PL+
Sbjct:  498 QHQEELATIEALDRGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLM 578

HSP 2 Score: 65.0846 bits (157), Expect = 6.143e-25
Identity = 29/73 (39.73%), Postives = 45/73 (61.64%), Query Frame = 2 
Query:  110 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEK 328
            I G+FVDA   KT+   +P    VI  V+     D+D+AVA A++AF+ G W K+   +R R++ R AD++E+
Sbjct:  426 IGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQ 498
[Close]
BLAST of CF504613 vs. ExPASy Swiss-Prot
Match: FTHFD_HUMAN (10-formyltetrahydrofolate dehydrogenase OS=Homo sapiens GN=ALDH1L1 PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 7.995e-25
Identity = 33/81 (40.74%), Postives = 49/81 (60.49%), Query Frame = 1 
Query:  325 ENMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYLGWADKIHGLTVP---GDGNYHIQ-TLHEPIGVAGQIVPWNFPLL 555
            ++ EELA +E  + G  Y  +LK+ V M ++   Y+ GW DKI G T+P      N ++  T  EP+GV G I+PWN+PL+
Sbjct:  498 QHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGSTIPINQARPNRNLTLTRKEPVGVCGIIIPWNYPLM 578

HSP 2 Score: 65.4698 bits (158), Expect = 7.995e-25
Identity = 31/73 (42.47%), Postives = 44/73 (60.27%), Query Frame = 2 
Query:  110 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEK 328
            I G+FVDA   KT    +P    VI  V+     D+D+AVA A+ AF+ G W K++  +R R+M R ADL+E+
Sbjct:  426 IGGEFVDAEGAKTSETINPTDGSVICQVSLAQVTDVDKAVAAAKDAFENGRWGKISARDRGRLMYRLADLMEQ 498
[Close]
BLAST of CF504613 vs. ExPASy Swiss-Prot
Match: BETB_BURCM (Betaine aldehyde dehydrogenase OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=betB PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.316e-24
Identity = 37/73 (50.68%), Postives = 49/73 (67.12%), Query Frame = 2 
Query:  110 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEK 328
            I G +VDA SGKTF  +DP T E++A V +  A D+DRAVA+AR+   E  W  MT  +RSRI+ RA DL+ +
Sbjct:   11 IGGGYVDATSGKTFDTFDPATGELLAQVQQASAADVDRAVASAREGQRE--WAAMTAMQRSRILRRAVDLLRE 81

HSP 2 Score: 58.5362 bits (140), Expect = 2.316e-24
Identity = 29/76 (38.16%), Postives = 42/76 (55.26%), Query Frame = 1 
Query:  325 ENMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYLGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPL 552
            E  +ELAA+ET + GKP  ++L  ++     ++ YY G A  I GL VP      + T  EP+GV   I  WN+P+
Sbjct:   81 ERNDELAAIETRDTGKPIGETLAVDIVTGADVIEYYAGLATAIEGLQVPLRAESFVYTRREPLGVCAGIGAWNYPI 156
[Close]
BLAST of CF504613 vs. ExPASy Swiss-Prot
Match: BETB_BURA4 (Betaine aldehyde dehydrogenase OS=Burkholderia ambifaria (strain MC40-6) GN=betB PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.316e-24
Identity = 37/73 (50.68%), Postives = 49/73 (67.12%), Query Frame = 2 
Query:  110 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEK 328
            I G +VDA SGKTF  +DP T E++A V +  A D+DRAVA+AR+   E  W  MT  +RSRI+ RA DL+ +
Sbjct:   11 IGGGYVDATSGKTFDTFDPATGELLAQVQQASAADVDRAVASAREGQRE--WAAMTAMQRSRILRRAVDLLRE 81

HSP 2 Score: 58.5362 bits (140), Expect = 2.316e-24
Identity = 29/76 (38.16%), Postives = 42/76 (55.26%), Query Frame = 1 
Query:  325 ENMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYLGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPL 552
            E  +ELAA+ET + GKP  ++L  ++     ++ YY G A  I GL VP      + T  EP+GV   I  WN+P+
Sbjct:   81 ERNDELAAIETRDTGKPIGETLAVDIVTGADVIEYYAGLATAIEGLQVPLRAESFVYTRREPLGVCAGIGAWNYPI 156
[Close]
BLAST of CF504613 vs. ExPASy Swiss-Prot
Match: BETB_BURS3 (Betaine aldehyde dehydrogenase OS=Burkholderia sp. (strain 383) GN=betB PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.921e-24
Identity = 36/73 (49.32%), Postives = 49/73 (67.12%), Query Frame = 2 
Query:  110 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEK 328
            I G +VDA SGKTF  +DP T E++A V +  A D+DRAVA+A++   E  W  MT  +RSRI+ RA DL+ +
Sbjct:   11 IGGGYVDATSGKTFDTFDPATGELLAQVQQASAADVDRAVASAQEGQRE--WAAMTAMQRSRILRRAVDLLRE 81

HSP 2 Score: 59.3066 bits (142), Expect = 3.921e-24
Identity = 30/76 (39.47%), Postives = 42/76 (55.26%), Query Frame = 1 
Query:  325 ENMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYLGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPL 552
            E  +ELAALET + GKP  ++L  ++     ++ YY G A  I GL VP      + T  EP+GV   I  WN+P+
Sbjct:   81 ERNDELAALETRDTGKPIGETLAVDIVTGADVIEYYAGLATAIEGLQVPLRAESFVYTRREPLGVCAGIGAWNYPI 156
[Close]
BLAST of CF504613 vs. ExPASy Swiss-Prot
Match: BETB_BURCJ (Betaine aldehyde dehydrogenase OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=betB PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 6.641e-24
Identity = 36/73 (49.32%), Postives = 49/73 (67.12%), Query Frame = 2 
Query:  110 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEK 328
            I G +VDA SGKTF  +DP T E++A V +  A D+DRAVA+A++   E  W  MT  +RSRI+ RA DL+ +
Sbjct:   11 IGGGYVDATSGKTFDTFDPATGELLAQVQQASAADVDRAVASAQEGQRE--WAAMTAMQRSRILRRAVDLLRE 81

HSP 2 Score: 58.5362 bits (140), Expect = 6.641e-24
Identity = 29/76 (38.16%), Postives = 42/76 (55.26%), Query Frame = 1 
Query:  325 ENMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYLGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPL 552
            E  +ELAA+ET + GKP  ++L  ++     ++ YY G A  I GL VP      + T  EP+GV   I  WN+P+
Sbjct:   81 ERNDELAAIETRDTGKPIGETLAVDIVTGADVIEYYAGLATAIEGLQVPLRAESFVYTRREPLGVCAGIGAWNYPI 156
[Close]
BLAST of CF504613 vs. ExPASy Swiss-Prot
Match: BETB_BURCC (Betaine aldehyde dehydrogenase OS=Burkholderia cenocepacia (strain MC0-3) GN=betB PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 6.641e-24
Identity = 36/73 (49.32%), Postives = 49/73 (67.12%), Query Frame = 2 
Query:  110 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEK 328
            I G +VDA SGKTF  +DP T E++A V +  A D+DRAVA+A++   E  W  MT  +RSRI+ RA DL+ +
Sbjct:   11 IGGGYVDATSGKTFDTFDPATGELLAQVQQASAADVDRAVASAQEGQRE--WATMTAMQRSRILRRAVDLLRE 81

HSP 2 Score: 58.5362 bits (140), Expect = 6.641e-24
Identity = 29/76 (38.16%), Postives = 42/76 (55.26%), Query Frame = 1 
Query:  325 ENMEELAALETWNNGKPYVQSLKSEVPMVVRLLHYYLGWADKIHGLTVPGDGNYHIQTLHEPIGVAGQIVPWNFPL 552
            E  +ELAA+ET + GKP  ++L  ++     ++ YY G A  I GL VP      + T  EP+GV   I  WN+P+
Sbjct:   81 ERNDELAAIETRDTGKPIGETLAVDIVTGADVIEYYAGLATAIEGLQVPLRAESFVYTRREPLGVCAGIGAWNYPI 156
The following BLAST results are available for this feature:
BLAST of CF504613 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 196
Match NameE-valueIdentityDescription
ALDH_CLAHE1.661e-2550.00Aldehyde dehydrogenase OS=Cladosporium herbarum GN... [more]
FTHFD_MOUSE3.627e-2539.5110-formyltetrahydrofolate dehydrogenase OS=Mus mus... [more]
FTHFD_PONAB4.721e-2540.7410-formyltetrahydrofolate dehydrogenase OS=Pongo a... [more]
FTHFD_RAT6.143e-2539.5110-formyltetrahydrofolate dehydrogenase OS=Rattus ... [more]
FTHFD_HUMAN7.995e-2540.7410-formyltetrahydrofolate dehydrogenase OS=Homo sa... [more]
BETB_BURCM2.316e-2450.68Betaine aldehyde dehydrogenase OS=Burkholderia amb... [more]
BETB_BURA42.316e-2450.68Betaine aldehyde dehydrogenase OS=Burkholderia amb... [more]
BETB_BURS33.921e-2449.32Betaine aldehyde dehydrogenase OS=Burkholderia sp.... [more]
BETB_BURCJ6.641e-2449.32Betaine aldehyde dehydrogenase OS=Burkholderia cep... [more]
BETB_BURCC6.641e-2449.32Betaine aldehyde dehydrogenase OS=Burkholderia cen... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-102 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-1_C12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504613 ID=CF504613; Name=CF504613; organism=Citrus sinensis; type=EST; length=555bp
CTTGGTAGGGAGTCTAGCAGGGCAAGAGGCATCAGCAGGTTTAGCACAGC
TGCTGTTGTTGAAGAGCCAATCATTCCACCTGTTCAAATTAGTTACACCT
AAGAATTTAATAAATGGCCAATTTGTAGACGCAGCATCAGGCAAAACATT
TCCGGTCTACGACCCTCGTACTGCTGAAGTGATTGCTAATGTTGCTGAAG
GAGATGCGGAAGATATTGACCGTGCAGTTGCTACTGCTCGCAAGGCATTT
GATGAGGGACCTTGGCCAAAGATGACCCCTTATGAGAGGTCAAGGATTAT
GTTGCGGGCTGCTGACTTGATTGAGAAAACATGGAGGAGCTGGCAGCTTT
GGAGACATGGAACAATGGAAAGCCCTATGTACAATCTCTCAAATCTGAAG
TACCAATGGTGGTTCGCCTGTTGCACTATTATCTTGGATGGGCTGATAAA
ATCCACGGACTAACTGTCCCTGGTGATGGAAATTACCATATTCAAACTTT
ACATGAACCAATTGGCGTTGCTGGCCAGATAGTTCCCTGGAACTTTCCTC
TTCTC
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