CF504619

Overview
NameCF504619
Unique NameCF504619
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length456
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504619 vs. ExPASy Swiss-Prot
Match: FGFR3_HUMAN (Fibroblast growth factor receptor 3 OS=Homo sapiens GN=FGFR3 PE=1 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 7.263e-11
Identity = 52/162 (32.10%), Postives = 79/162 (48.77%), Query Frame = 3
Query:   21 HRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGR--PALDWARRK--------------KIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 455
            H+N++ L G C+      ++  Y   G+    LR+ +  R  P LD++                   A   ARG+ YL  Q   K IHRD+ A N+L+ ED    + DFGLA+ + + D +  TT  R  V  +APE L     + ++DV+ FG+LL E+ T
Sbjct:  535 HKNIINLLGACTQGGPLYVLVEYAAKGN----LREFLRARRPPGLDYSFDTCKPPEEQLTFKDLVSCAYQVARGMEYLASQ---KCIHRDLAARNVLVTEDNVMKIADFGLARDVHNLDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFT 689          
BLAST of CF504619 vs. ExPASy Swiss-Prot
Match: CSK_RAT (Tyrosine-protein kinase CSK OS=Rattus norvegicus GN=Csk PE=1 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 7.263e-11
Identity = 52/144 (36.11%), Postives = 67/144 (46.53%), Query Frame = 3
Query:   21 HRNLLRLCGFCSTENERL-LVYPYMPNGSVASRLRDHIHGRPALDWARRKKIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLEL 449
            H NL++L G    E   L +V  YM  GS+   LR    GR  L      K +L     + YL        +HRD+ A N+L+ ED  A V DFGL K            V+ T    APE L   + S K+DV+ FGILL E+
Sbjct:  245 HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSR--GRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----APEALREKKFSTKSDVWSFGILLWEI 379          
BLAST of CF504619 vs. ExPASy Swiss-Prot
Match: CSK_HUMAN (Tyrosine-protein kinase CSK OS=Homo sapiens GN=CSK PE=1 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 7.263e-11
Identity = 52/144 (36.11%), Postives = 67/144 (46.53%), Query Frame = 3
Query:   21 HRNLLRLCGFCSTENERL-LVYPYMPNGSVASRLRDHIHGRPALDWARRKKIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLEL 449
            H NL++L G    E   L +V  YM  GS+   LR    GR  L      K +L     + YL        +HRD+ A N+L+ ED  A V DFGL K            V+ T    APE L   + S K+DV+ FGILL E+
Sbjct:  245 HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSR--GRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----APEALREKKFSTKSDVWSFGILLWEI 379          
BLAST of CF504619 vs. ExPASy Swiss-Prot
Match: ANKK1_HUMAN (Ankyrin repeat and protein kinase domain-containing protein 1 OS=Homo sapiens GN=ANKK1 PE=1 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 7.263e-11
Identity = 44/132 (33.33%), Postives = 70/132 (53.03%), Query Frame = 3
Query:   75 LVYPYMPNGSVASRLRDHIHGRPALDWARRKKIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDH--RDSHV-TTAVRGTVGHIAPEYL--STGQSSEKTDVFGFGILLLELIT 455
            +V  +M NGS+   L  H     +L W  R +I   T+  + +LH    P ++H D+K  NILLD +    + DFGL+K ++   R  ++  +A+RG + +I PE    S      K DV+ F I++ EL+T
Sbjct:   96 IVMEFMANGSLEKVLSTH-----SLCWKLRFRIIHETSLAMNFLHS-IKPPLLHLDLKPGNILLDSNMHVKISDFGLSKWMEQSTRMQYIERSALRGMLSYIPPEMFLESNKAPGPKYDVYSFAIVIWELLT 221          
BLAST of CF504619 vs. ExPASy Swiss-Prot
Match: STE11_YEAST (Serine/threonine-protein kinase STE11 OS=Saccharomyces cerevisiae GN=STE11 PE=1 SV=3)

HSP 1 Score: 65.855 bits (159), Expect = 9.486e-11
Identity = 42/147 (28.57%), Postives = 78/147 (53.06%), Query Frame = 3
Query:   21 HRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKKIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLD--HRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 455
            H N++   G         +   Y+P GSV+S L ++     +L     ++I +G A    YLH++    IIHRD+K ANIL+D      + DFG++K L   ++  +   +++G+V  ++PE +    ++ K D++  G +++E+ T
Sbjct:  513 HENIVTYYGASQEGGNLNIFLEYVPGGSVSSMLNNYGPFEESLITNFTRQILIGVA----YLHKK---NIIHRDIKGANILIDIKGCVKITDFGISKKLSPLNKKQNKRASLQGSVFWMSPEVVKQTATTAKADIWSTGCVVIEMFT 652          
BLAST of CF504619 vs. ExPASy Swiss-Prot
Match: STE11_YEAS7 (Serine/threonine-protein kinase STE11 OS=Saccharomyces cerevisiae (strain YJM789) GN=STE11 PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 9.486e-11
Identity = 42/147 (28.57%), Postives = 78/147 (53.06%), Query Frame = 3
Query:   21 HRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKKIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLD--HRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 455
            H N++   G         +   Y+P GSV+S L ++     +L     ++I +G A    YLH++    IIHRD+K ANIL+D      + DFG++K L   ++  +   +++G+V  ++PE +    ++ K D++  G +++E+ T
Sbjct:  513 HENIVTYYGASQEGGNLNIFLEYVPGGSVSSMLNNYGPFEESLITNFTRQILIGVA----YLHKK---NIIHRDIKGANILIDIKGCVKITDFGISKKLSPLNKKQNKRASLQGSVFWMSPEVVKQTATTAKADIWSTGCVVIEMFT 652          
BLAST of CF504619 vs. ExPASy Swiss-Prot
Match: SRK4_SPOLA (Tyrosine-protein kinase isoform SRK4 OS=Spongilla lacustris GN=SRK1 PE=2 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 9.486e-11
Identity = 48/145 (33.10%), Postives = 71/145 (48.97%), Query Frame = 3
Query:   21 HRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKKIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 455
            H  L++L   C+ E    +V   M +GS+   LR    GR +L       +    A G+ YL +Q     IHRD+ A NIL+ E     V DFGLA+++D          +  +   APE     + + K+DV+ FGI+L E+IT
Sbjct:  292 HPKLIQLYAVCTKEEPIYIVTELMKHGSLLEYLRGD--GR-SLKLPDLVDMCSQVASGMSYLEQQ---NYIHRDLAARNILVGEHKICKVADFGLARVIDEEIYEAKLGAKFPIKWTAPEAAMYSRFTIKSDVWSFGIVLYEVIT 430          
BLAST of CF504619 vs. ExPASy Swiss-Prot
Match: SRC_RSVSA (Tyrosine-protein kinase transforming protein Src OS=Avian leukosis virus RSA GN=V-SRC PE=1 SV=5)

HSP 1 Score: 65.855 bits (159), Expect = 9.486e-11
Identity = 47/145 (32.41%), Postives = 72/145 (49.66%), Query Frame = 3
Query:   21 HRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKKIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 455
            H  L++L    S E    +V  YM  GS+   L+  +     L   +   +A   A G+ Y+        +HRD++AANIL+ E+    V DFGLA+L++  +       +  +   APE    G+ + K+DV+ FGILL EL T
Sbjct:  319 HEKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGEMG--KYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 457          
BLAST of CF504619 vs. ExPASy Swiss-Prot
Match: SRC_HUMAN (Proto-oncogene tyrosine-protein kinase Src OS=Homo sapiens GN=SRC PE=1 SV=3)

HSP 1 Score: 65.855 bits (159), Expect = 9.486e-11
Identity = 49/147 (33.33%), Postives = 72/147 (48.98%), Query Frame = 3
Query:   21 HRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPA--LDWARRKKIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 455
            H  L++L    S E    +V  YM  GS    L D + G     L   +   +A   A G+ Y+        +HRD++AANIL+ E+    V DFGLA+L++  +       +  +   APE    G+ + K+DV+ FGILL EL T
Sbjct:  322 HEKLVQLYAVVS-EEPIYIVTEYMSKGS----LLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 460          
BLAST of CF504619 vs. ExPASy Swiss-Prot
Match: SRC_CHICK (Proto-oncogene tyrosine-protein kinase Src OS=Gallus gallus GN=SRC PE=1 SV=4)

HSP 1 Score: 65.855 bits (159), Expect = 9.486e-11
Identity = 47/145 (32.41%), Postives = 72/145 (49.66%), Query Frame = 3
Query:   21 HRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKKIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 455
            H  L++L    S E    +V  YM  GS+   L+  +     L   +   +A   A G+ Y+        +HRD++AANIL+ E+    V DFGLA+L++  +       +  +   APE    G+ + K+DV+ FGILL EL T
Sbjct:  319 HEKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGEMG--KYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 457          
The following BLAST results are available for this feature:
BLAST of CF504619 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FGFR3_HUMAN7.263e-1132.10Fibroblast growth factor receptor 3 OS=Homo sapien... [more]
CSK_RAT7.263e-1136.11Tyrosine-protein kinase CSK OS=Rattus norvegicus G... [more]
CSK_HUMAN7.263e-1136.11Tyrosine-protein kinase CSK OS=Homo sapiens GN=CSK... [more]
ANKK1_HUMAN7.263e-1133.33Ankyrin repeat and protein kinase domain-containin... [more]
STE11_YEAST9.486e-1128.57Serine/threonine-protein kinase STE11 OS=Saccharom... [more]
STE11_YEAS79.486e-1128.57Serine/threonine-protein kinase STE11 OS=Saccharom... [more]
SRK4_SPOLA9.486e-1133.10Tyrosine-protein kinase isoform SRK4 OS=Spongilla ... [more]
SRC_RSVSA9.486e-1132.41Tyrosine-protein kinase transforming protein Src O... [more]
SRC_HUMAN9.486e-1133.33Proto-oncogene tyrosine-protein kinase Src OS=Homo... [more]
SRC_CHICK9.486e-1132.41Proto-oncogene tyrosine-protein kinase Src OS=Gall... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-108 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-1_D06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504619 ID=CF504619; Name=CF504619; organism=Citrus sinensis; type=EST; length=456bp
AGACGATAAGTTTAGCTGTCCACCGGAATCTCCTCAGGCTCTGTGGTTTC
TGCTCTACTGAAAATGAAAGGCTTCTTGTTTATCCCTATATGCCAAATGG
TAGTGTAGCATCAAGATTAAGAGATCACATTCATGGTCGGCCAGCTTTAG
ATTGGGCAAGACGGAAAAAGATTGCCCTGGGCACGGCAAGGGGTCTGCTT
TATTTACATGAACAGTGTGACCCCAAAATTATCCACCGTGATGTCAAGGC
AGCCAACATTTTGCTGGATGAAGATTTTGAGGCAGTTGTCGGAGATTTTG
GATTAGCAAAGCTCTTGGATCACAGGGATTCCCATGTAACCACAGCTGTG
CGCGGCACTGTTGGCCATATTGCTCCAGAGTATTTATCAACGGGTCAGTC
TTCAGAAAAGACAGATGTATTTGGGTTTGGGATCTTGCTGCTTGAACTGA
TAACAG
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