CF504619

Overview
NameCF504619
Unique NameCF504619
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length456
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504619 vs. ExPASy Swiss-Prot
Match: CLV1_ARATH (Receptor protein kinase CLAVATA1 OS=Arabidopsis thaliana GN=CLV1 PE=1 SV=3)

HSP 1 Score: 142.124 bits (357), Expect = 1.042e-33
Identity = 73/151 (48.34%), Postives = 100/151 (66.23%), Query Frame = 3
Query:    3 TISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKKIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAK-LLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELI 452
            T+    HR+++RL G+ + ++  LL+Y YMPNGS+   L     G   L W  R ++A+  A+GL YLH  C P I+HRDVK+ NILLD DFEA V DFGLAK L+D   S   +++ G+ G+IAPEY  T +  EK+DV+ FG++LLELI
Sbjct:  740 TLGRIRHRHIVRLLGYVANKDTNLLLYEYMPNGSLGELLHGSKGGH--LQWETRHRVAVEAAKGLCYLHHDCSPLILHRDVKSNNILLDSDFEAHVADFGLAKFLVDGAASECMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELI 888          
BLAST of CF504619 vs. ExPASy Swiss-Prot
Match: Y5374_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g37450 OS=Arabidopsis thaliana GN=At5g37450 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 1.360e-33
Identity = 74/151 (49.01%), Postives = 100/151 (66.23%), Query Frame = 3
Query:   21 HRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKKIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLD------HRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 455
            HRNL+ L G+C  + E++LVY YMPNGS+   L      R  L  A R +IALG+ARG+LYLH + DP IIHRD+K +NILLD      V DFG++KL+        RD HVTT V+GT G++ PEY  + + +EK+DV+  GI+ LE++T
Sbjct:  684 HRNLVSLLGYCDQKGEQMLVYEYMPNGSLQDALSARF--RQPLSLALRLRIALGSARGILYLHTEADPPIIHRDIKPSNILLDSKMNPKVADFGISKLIALDGGGVQRD-HVTTIVKGTPGYVDPEYYLSHRLTEKSDVYSLGIVFLEILT 831          
BLAST of CF504619 vs. ExPASy Swiss-Prot
Match: PSYR1_ARATH (Tyrosine-sulfated glycopeptide receptor 1 OS=Arabidopsis thaliana GN=PSYR1 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 1.360e-33
Identity = 66/150 (44.00%), Postives = 103/150 (68.67%), Query Frame = 3
Query:    6 ISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKKIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 455
            +S A H NL+ L G+C  ++ R+L+Y +M NGS+   L ++  G   LDW +R  I  G + GL Y+H+ C+P I+HRD+K++NILLD +F+A V DFGL++L+    +HVTT + GT+G+I PEY     ++ + DV+ FG+++LEL+T
Sbjct:  851 LSRAKHENLVALQGYCVHDSARILIYSFMENGSLDYWLHENPEGPAQLDWPKRLNIMRGASSGLAYMHQICEPHIVHRDIKSSNILLDGNFKAYVADFGLSRLILPYRTHVTTELVGTLGYIPPEYGQAWVATLRGDVYSFGVVMLELLT 1000          
BLAST of CF504619 vs. ExPASy Swiss-Prot
Match: HERK_ARATH (Receptor-like protein kinase HERK 1 OS=Arabidopsis thaliana GN=HERK1 PE=1 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 1.360e-33
Identity = 71/145 (48.97%), Postives = 100/145 (68.97%), Query Frame = 3
Query:   21 HRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKKIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRD-SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELI 452
            HR+L+ L G+C   NE +L+Y YM NG+V S L  +  G P+L W +R +I +G ARGL YLH      +IHRDVK+ANILLDE+F A V DFGL+K     D +HV+TAV+G+ G++ PEY    Q ++K+DV+ FG++L E++
Sbjct:  538 HRHLVSLIGYCDENNEMILIYEYMENGTVKSHL--YGSGLPSLTWKQRLEICIGAARGLHYLHTGDSKPVIHRDVKSANILLDENFMAKVADFGLSKTGPELDQTHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVL 680          
BLAST of CF504619 vs. ExPASy Swiss-Prot
Match: RKF1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RFK1 OS=Arabidopsis thaliana GN=RKF1 PE=1 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 1.777e-33
Identity = 68/149 (45.64%), Postives = 96/149 (64.43%), Query Frame = 3
Query:    6 ISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKKIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELI 452
            IS   H NL++L GFC    + LL Y YM N S++S L    H +  +DW  R KI  G A+GL +LHE+   K +HRD+KA NILLD+D    + DFGLA+L +   +H++T V GT+G++APEY   G  + K DV+ FG+L+LE++
Sbjct:  729 ISCLQHPNLVKLHGFCVERAQLLLAYEYMENNSLSSALFSPKHKQIPMDWPTRFKICCGIAKGLAFLHEESPLKFVHRDIKATNILLDKDLTPKISDFGLARLDEEEKTHISTKVAGTIGYMAPEYALWGYLTFKADVYSFGVLVLEIV 877          
BLAST of CF504619 vs. ExPASy Swiss-Prot
Match: LRKA2_ARATH (Lectin-domain containing receptor kinase A4.2 OS=Arabidopsis thaliana GN=LECRKA4.2 PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 1.777e-33
Identity = 70/150 (46.67%), Postives = 100/150 (66.67%), Query Frame = 3
Query:   21 HRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRP-----ALDWARRKKIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 455
            H+NL+ L G+C  +N+ LL+Y Y+PNGS+ S L    + RP      L W  R KIA G A GLLYLHE+ +  +IHRD+K +N+L+++D    +GDFGLA+L +      TT V GT+G++APE    G+SS  +DVF FG+LLLE+++
Sbjct:  416 HKNLVNLQGWCKQKNDLLLIYDYIPNGSLDSLL----YSRPRQSGVVLSWNARFKIAKGIASGLLYLHEEWEKVVIHRDIKPSNVLIEDDMNPRLGDFGLARLYERGSQSNTTVVVGTIGYMAPELARNGKSSSASDVFAFGVLLLEIVS 561          
BLAST of CF504619 vs. ExPASy Swiss-Prot
Match: RKF3_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RKF3 OS=Arabidopsis thaliana GN=RKF3 PE=1 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 2.320e-33
Identity = 76/152 (50.00%), Postives = 101/152 (66.45%), Query Frame = 3
Query:   21 HRNLLRLCGFCSTE-----NERLLVYPYMPNGSVASRLRDHIHG--RPALDWARRKKIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 455
            H NLL L G+C+       ++R++V   + NGS    L DH+ G     L W  R++IALG ARGL YLH    P IIHRD+KA+NILLDE FEA V DFGLAK      +H++T V GT+G++APEY   GQ +EK+DV+ FG++LLEL++
Sbjct:  336 HVNLLALRGYCTATTPYEGHQRIIVCDLVSNGS----LHDHLFGDLEAQLAWPLRQRIALGMARGLAYLHYGAQPSIIHRDIKASNILLDERFEAKVADFGLAKFNPEGMTHMSTRVAGTMGYVAPEYALYGQLTEKSDVYSFGVVLLELLS 483          
BLAST of CF504619 vs. ExPASy Swiss-Prot
Match: Y4291_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g29180 OS=Arabidopsis thaliana GN=At4g29180 PE=2 SV=2)

HSP 1 Score: 140.584 bits (353), Expect = 3.030e-33
Identity = 73/148 (49.32%), Postives = 98/148 (66.22%), Query Frame = 3
Query:   21 HRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPA--LDWARRKKIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRD-SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 455
            HRNL    G+C       L+Y YM NG+    L+D++    A  L W +R  IA+ +A+GL YLH  C P I+HRDVK ANILL+++ EA + DFGL+K+    D SHV TAV GT G++ PEY +T + +EK+DV+ FGI+LLELIT
Sbjct:  633 HRNLASFVGYCDDGRSMALIYEYMANGN----LQDYLSSENAEDLSWEKRLHIAIDSAQGLEYLHHGCRPPIVHRDVKTANILLNDNLEAKIADFGLSKVFPEDDLSHVVTAVMGTPGYVDPEYYNTFKLNEKSDVYSFGIVLLELIT 776          
BLAST of CF504619 vs. ExPASy Swiss-Prot
Match: Y2289_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g28960 OS=Arabidopsis thaliana GN=At2g28960 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 3.958e-33
Identity = 71/146 (48.63%), Postives = 96/146 (65.75%), Query Frame = 3
Query:   21 HRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKKIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLD-HRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 455
            H NL+ L G+C  E+   L+Y Y PNG +   L     G P L W+ R KI + TA+GL YLH  C P ++HRDVK  NILLDE F+A + DFGL++      ++HV+TAV GT G++ PEY  T + +EK+DV+ FGI+LLE+IT
Sbjct:  626 HVNLVSLVGYCDEESNLALLYEYAPNGDLKQHLSGERGGSP-LKWSSRLKIVVETAQGLEYLHTGCKPPMVHRDVKTTNILLDEHFQAKLADFGLSRSFPVGGETHVSTAVAGTPGYLDPEYYRTNRLNEKSDVYSFGIVLLEIIT 770          
BLAST of CF504619 vs. ExPASy Swiss-Prot
Match: CRK39_ARATH (Putative cysteine-rich receptor-like protein kinase 39 OS=Arabidopsis thaliana GN=CRK39 PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 5.169e-33
Identity = 72/146 (49.32%), Postives = 99/146 (67.81%), Query Frame = 3
Query:   21 HRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKKIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHV-TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 455
            HRNL++L GFC+  +E++LVY ++PN S+   + D    R  L W  R +I  G ARGLLYLHE    KIIHRD+KA+NILLD +    V DFG A+L D  ++   T  + GT G++APEYL+ GQ S K+DV+ FG++LLE+I+
Sbjct:  406 HRNLVKLLGFCNEGDEQILVYEFVPNSSLDHFIFDD-EKRSLLTWEMRYRIIEGIARGLLYLHEDSQLKIIHRDLKASNILLDAEMNPKVADFGTARLFDSDETRAETKRIAGTRGYMAPEYLNHGQISAKSDVYSFGVMLLEMIS 550          
The following BLAST results are available for this feature:
BLAST of CF504619 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CLV1_ARATH1.042e-3348.34Receptor protein kinase CLAVATA1 OS=Arabidopsis th... [more]
Y5374_ARATH1.360e-3349.01Probable LRR receptor-like serine/threonine-protei... [more]
PSYR1_ARATH1.360e-3344.00Tyrosine-sulfated glycopeptide receptor 1 OS=Arabi... [more]
HERK_ARATH1.360e-3348.97Receptor-like protein kinase HERK 1 OS=Arabidopsis... [more]
RKF1_ARATH1.777e-3345.64Probable LRR receptor-like serine/threonine-protei... [more]
LRKA2_ARATH1.777e-3346.67Lectin-domain containing receptor kinase A4.2 OS=A... [more]
RKF3_ARATH2.320e-3350.00Probable LRR receptor-like serine/threonine-protei... [more]
Y4291_ARATH3.030e-3349.32Probable LRR receptor-like serine/threonine-protei... [more]
Y2289_ARATH3.958e-3348.63Probable LRR receptor-like serine/threonine-protei... [more]
CRK39_ARATH5.169e-3349.32Putative cysteine-rich receptor-like protein kinas... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-108 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-1_D06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504619 ID=CF504619; Name=CF504619; organism=Citrus sinensis; type=EST; length=456bp
AGACGATAAGTTTAGCTGTCCACCGGAATCTCCTCAGGCTCTGTGGTTTC
TGCTCTACTGAAAATGAAAGGCTTCTTGTTTATCCCTATATGCCAAATGG
TAGTGTAGCATCAAGATTAAGAGATCACATTCATGGTCGGCCAGCTTTAG
ATTGGGCAAGACGGAAAAAGATTGCCCTGGGCACGGCAAGGGGTCTGCTT
TATTTACATGAACAGTGTGACCCCAAAATTATCCACCGTGATGTCAAGGC
AGCCAACATTTTGCTGGATGAAGATTTTGAGGCAGTTGTCGGAGATTTTG
GATTAGCAAAGCTCTTGGATCACAGGGATTCCCATGTAACCACAGCTGTG
CGCGGCACTGTTGGCCATATTGCTCCAGAGTATTTATCAACGGGTCAGTC
TTCAGAAAAGACAGATGTATTTGGGTTTGGGATCTTGCTGCTTGAACTGA
TAACAG
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