CF504619

Overview
NameCF504619
Unique NameCF504619
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length456
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504619 vs. ExPASy Swiss-Prot
Match: Y2393_ARATH (Probable receptor-like protein kinase At2g39360 OS=Arabidopsis thaliana GN=At2g39360 PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 6.751e-33
Identity = 69/145 (47.59%), Postives = 101/145 (69.66%), Query Frame = 3
Query:   21 HRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKKIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKL-LDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELI 452
            HR+L+ L G+C   +E ++VY YM  G++   L D +  +P L W +R +I +G ARGL YLH      IIHRDVK+ANILLD++F A V DFGL+K   D   +HV+TAV+G+ G++ PEYL+  Q +EK+DV+ FG+++LE++
Sbjct:  540 HRHLVSLIGYCDENSEMIIVYEYMEKGTLKDHLYD-LDDKPRLSWRQRLEICVGAARGLHYLHTGSTRAIIHRDVKSANILLDDNFMAKVADFGLSKTGPDLDQTHVSTAVKGSFGYLDPEYLTRQQLTEKSDVYSFGVVMLEVV 683          
BLAST of CF504619 vs. ExPASy Swiss-Prot
Match: Y1357_ARATH (Probable receptor-like protein kinase At1g30570 OS=Arabidopsis thaliana GN=At1g30570 PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 6.751e-33
Identity = 73/149 (48.99%), Postives = 99/149 (66.44%), Query Frame = 3
Query:   21 HRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGR--PALDWARRKKIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKL---LDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELI 452
            HR+L+ L GFC   NE +LVY YM NG+    LR H+ G   P L W +R +  +G+ARGL YLH   +  IIHRDVK  NILLDE+F A + DFGL+K    +DH  +HV+TAV+G+ G++ PEY    Q +EK+DV+ FG++L E +
Sbjct:  573 HRHLVSLIGFCDEHNEMILVYEYMANGT----LRSHLFGSNLPPLSWKQRLEACIGSARGLHYLHTGSERGIIHRDVKTTNILLDENFVAKMSDFGLSKAGPSMDH--THVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEAV 715          
BLAST of CF504619 vs. ExPASy Swiss-Prot
Match: RLK5_ARATH (Receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=RLK5 PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 6.751e-33
Identity = 70/154 (45.45%), Postives = 100/154 (64.94%), Query Frame = 3
Query:    3 TISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKKIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAK---LLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 455
            T+    H++++RL   CS+ + +LLVY YMPNGS+A  L     G   L W  R +IAL  A GL YLH  C P I+HRDVK++NILLD D+ A V DFG+AK   +   +     + + G+ G+IAPEY+ T + +EK+D++ FG++LLEL+T
Sbjct:  740 TLGTIRHKSIVRLWCCCSSGDCKLLVYEYMPNGSLADVLHGDRKGGVVLGWPERLRIALDAAEGLSYLHHDCVPPIVHRDVKSSNILLDSDYGAKVADFGIAKVGQMSGSKTPEAMSGIAGSCGYIAPEYVYTLRVNEKSDIYSFGVVLLELVT 893          
BLAST of CF504619 vs. ExPASy Swiss-Prot
Match: LRKA3_ARATH (Lectin-domain containing receptor kinase A4.3 OS=Arabidopsis thaliana GN=LECRKA4.3 PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 6.751e-33
Identity = 70/146 (47.95%), Postives = 95/146 (65.07%), Query Frame = 3
Query:   21 HRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPA-LDWARRKKIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 455
            H+NL+ L G+C   N+ LL+Y Y+PNGS+ S L        A L W  R +IA G A GLLYLHE+ +  +IHRDVK +N+L+D D    +GDFGLA+L +      TT V GT+G++APE    G SS  +DVF FG+LLLE+++
Sbjct:  417 HKNLVNLQGWCKHRNDLLLIYDYIPNGSLDSLLYSKPRRSGAVLSWNARFQIAKGIASGLLYLHEEWEQIVIHRDVKPSNVLIDSDMNPRLGDFGLARLYERGSQSCTTVVVGTIGYMAPELARNGNSSSASDVFAFGVLLLEIVS 562          
BLAST of CF504619 vs. ExPASy Swiss-Prot
Match: Y1534_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Arabidopsis thaliana GN=At1g53420 PE=2 SV=2)

HSP 1 Score: 138.658 bits (348), Expect = 1.152e-32
Identity = 67/149 (44.97%), Postives = 95/149 (63.76%), Query Frame = 3
Query:    6 ISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKKIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELI 452
            IS   H NL++L G C    + LLVY ++ N S+A  L      +  LDW  R+KI +G ARGL YLHE+   KI+HRD+KA N+LLD+     + DFGLAKL +   +H++T + GT G++APEY   G  ++K DV+ FGI+ LE++
Sbjct:  672 ISALHHPNLVKLYGCCVEGGQLLLVYEFVENNSLARALFGPQETQLRLDWPTRRKICIGVARGLAYLHEESRLKIVHRDIKATNVLLDKQLNPKISDFGLAKLDEEDSTHISTRIAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIV 820          
BLAST of CF504619 vs. ExPASy Swiss-Prot
Match: RPK1_IPONI (Receptor-like protein kinase OS=Ipomoea nil GN=INRPK1 PE=2 SV=2)

HSP 1 Score: 138.658 bits (348), Expect = 1.152e-32
Identity = 72/152 (47.37%), Postives = 99/152 (65.13%), Query Frame = 3
Query:    3 TISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKKIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHV-TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 455
            TI    HRNL++L  F   +   L++Y YM NGS+   L +    +P LDW+ R  IA+GTA GL YLH  CDP I+HRD+K  NILLD D E  + DFG+AKLLD   + + +  V+GT+G++APE   T   S ++DV+ +G++LLELIT
Sbjct:  864 TIGKVRHRNLIKLEEFWLRKEYGLILYTYMENGSLHDILHETNPPKP-LDWSTRHNIAVGTAHGLAYLHFDCDPAIVHRDIKPMNILLDSDLEPHISDFGIAKLLDQSATSIPSNTVQGTIGYMAPENAFTTVKSRESDVYSYGVVLLELIT 1014          
BLAST of CF504619 vs. ExPASy Swiss-Prot
Match: PEPR1_ARATH (Leucine-rich repeat receptor-like protein kinase PEPR1 OS=Arabidopsis thaliana GN=PEPR1 PE=1 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 1.152e-32
Identity = 76/156 (48.72%), Postives = 100/156 (64.10%), Query Frame = 3
Query:    3 TISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHG----RPALDWARRKKIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTA-VRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 455
            TI    HRNL++L GF   +++ L++Y YMP GS    L D +HG       LDW+ R  +ALG A GL YLH  C P I+HRD+K  NIL+D D E  +GDFGLA+LLD  DS V+TA V GT G+IAPE         ++DV+ +G++LLEL+T
Sbjct:  875 TIGKVRHRNLIKLEGFWLRKDDGLMLYRYMPKGS----LYDVLHGVSPKENVLDWSARYNVALGVAHGLAYLHYDCHPPIVHRDIKPENILMDSDLEPHIGDFGLARLLD--DSTVSTATVTGTTGYIAPENAFKTVRGRESDVYSYGVVLLELVT 1024          
BLAST of CF504619 vs. ExPASy Swiss-Prot
Match: MEE39_ARATH (Probable LRR receptor-like serine/threonine-protein kinase MEE39 OS=Arabidopsis thaliana GN=MEE39 PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 1.152e-32
Identity = 70/147 (47.62%), Postives = 96/147 (65.31%), Query Frame = 3
Query:   21 HRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKKIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAK--LLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 455
            H NL+ L G+C  ++   L+Y YM NG +   L    HG   L+W  R +IA+  A GL YLH  C P ++HRDVK+ NILLDE+F+A + DFGL++   +    S V+T V GT+G++ PEY  T + SEK+DV+ FGILLLE+IT
Sbjct:  619 HINLVNLVGYCDEQDHFALIYEYMSNGDLHQHLSGK-HGGSVLNWGTRLQIAIEAALGLEYLHTGCKPAMVHRDVKSTNILLDEEFKAKIADFGLSRSFQVGGDQSQVSTVVAGTLGYLDPEYYLTSELSEKSDVYSFGILLLEIIT 764          
BLAST of CF504619 vs. ExPASy Swiss-Prot
Match: CRK41_ARATH (Cysteine-rich receptor-like protein kinase 41 OS=Arabidopsis thaliana GN=CRK41 PE=2 SV=2)

HSP 1 Score: 138.658 bits (348), Expect = 1.152e-32
Identity = 72/147 (48.98%), Postives = 96/147 (65.31%), Query Frame = 3
Query:   21 HRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKKIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLD---HRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELI 452
            HRNL+RL GFC    ER+L+Y +  N S+   + D  + R  LDW  R +I  G ARGLLYLHE    KI+HRD+KA+N+LLD+     + DFG+AKL D      +  T+ V GT G++APEY  +G+ S KTDVF FG+L+LE+I
Sbjct:  397 HRNLVRLLGFCLQGEERILIYEFFKNTSLDHYIFDS-NRRMILDWETRYRIISGVARGLLYLHEDSRFKIVHRDMKASNVLLDDAMNPKIADFGMAKLFDTDQTSQTRFTSKVAGTYGYMAPEYAMSGEFSVKTDVFSFGVLVLEII 542          
BLAST of CF504619 vs. ExPASy Swiss-Prot
Match: CRK26_ARATH (Cysteine-rich receptor-like protein kinase 26 OS=Arabidopsis thaliana GN=CRK26 PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 1.152e-32
Identity = 72/147 (48.98%), Postives = 99/147 (67.35%), Query Frame = 3
Query:   21 HRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKKIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKL--LDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 455
            HRNL++L G+     ERLLVY ++P+ S+   + D I G   L+W  R KI  G ARGLLYLH+    +IIHRD+KA+NILLDE+    + DFG+A+L  +DH     T  + GT G++APEY+  GQ S KTDV+ FG+L+LE+I+
Sbjct:  397 HRNLVKLLGYSIEGTERLLVYEFLPHTSLDKFIFDPIQGNE-LEWEIRYKIIGGVARGLLYLHQDSRLRIIHRDLKASNILLDEEMTPKIADFGMARLFDIDHTTQRYTNRIVGTFGYMAPEYVMHGQFSFKTDVYSFGVLVLEIIS 542          
The following BLAST results are available for this feature:
BLAST of CF504619 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y2393_ARATH6.751e-3347.59Probable receptor-like protein kinase At2g39360 OS... [more]
Y1357_ARATH6.751e-3348.99Probable receptor-like protein kinase At1g30570 OS... [more]
RLK5_ARATH6.751e-3345.45Receptor-like protein kinase 5 OS=Arabidopsis thal... [more]
LRKA3_ARATH6.751e-3347.95Lectin-domain containing receptor kinase A4.3 OS=A... [more]
Y1534_ARATH1.152e-3244.97Probable LRR receptor-like serine/threonine-protei... [more]
RPK1_IPONI1.152e-3247.37Receptor-like protein kinase OS=Ipomoea nil GN=INR... [more]
PEPR1_ARATH1.152e-3248.72Leucine-rich repeat receptor-like protein kinase P... [more]
MEE39_ARATH1.152e-3247.62Probable LRR receptor-like serine/threonine-protei... [more]
CRK41_ARATH1.152e-3248.98Cysteine-rich receptor-like protein kinase 41 OS=A... [more]
CRK26_ARATH1.152e-3248.98Cysteine-rich receptor-like protein kinase 26 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-108 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-1_D06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504619 ID=CF504619; Name=CF504619; organism=Citrus sinensis; type=EST; length=456bp
AGACGATAAGTTTAGCTGTCCACCGGAATCTCCTCAGGCTCTGTGGTTTC
TGCTCTACTGAAAATGAAAGGCTTCTTGTTTATCCCTATATGCCAAATGG
TAGTGTAGCATCAAGATTAAGAGATCACATTCATGGTCGGCCAGCTTTAG
ATTGGGCAAGACGGAAAAAGATTGCCCTGGGCACGGCAAGGGGTCTGCTT
TATTTACATGAACAGTGTGACCCCAAAATTATCCACCGTGATGTCAAGGC
AGCCAACATTTTGCTGGATGAAGATTTTGAGGCAGTTGTCGGAGATTTTG
GATTAGCAAAGCTCTTGGATCACAGGGATTCCCATGTAACCACAGCTGTG
CGCGGCACTGTTGGCCATATTGCTCCAGAGTATTTATCAACGGGTCAGTC
TTCAGAAAAGACAGATGTATTTGGGTTTGGGATCTTGCTGCTTGAACTGA
TAACAG
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