CF504619

Overview
NameCF504619
Unique NameCF504619
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length456
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504619 vs. ExPASy Swiss-Prot
Match: Y5613_ARATH (Probable receptor-like protein kinase At5g61350 OS=Arabidopsis thaliana GN=At5g61350 PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 1.504e-32
Identity = 71/152 (46.71%), Postives = 96/152 (63.16%), Query Frame = 3
Query:   21 HRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGR--------PALDWARRKKIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELI 452
            HR+L+ L GFC    E +LVY YM NG     LRDH++G         P L W +R +I +G+ARGL YLH      IIHRDVK  NILLDE+  A V DFGL+K     + HV+TAV+G+ G++ PEY    Q ++K+DV+ FG++L E++
Sbjct:  578 HRHLVSLIGFCDENKEMILVYEYMSNGP----LRDHLYGSKENDPNPIPTLSWKQRLEICIGSARGLHYLHTGAAQGIIHRDVKTTNILLDENLVAKVSDFGLSKDAPMDEGHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVL 725          
BLAST of CF504619 vs. ExPASy Swiss-Prot
Match: THE1_ARATH (Receptor-like protein kinase THESEUS 1 OS=Arabidopsis thaliana GN=THE1 PE=1 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 1.964e-32
Identity = 71/147 (48.30%), Postives = 97/147 (65.99%), Query Frame = 3
Query:   21 HRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGR--PALDWARRKKIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRD-SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELI 452
            HR+L+ L G+C   +E +LVY YM NG     LR H++G   P L W +R +I +G ARGL YLH      IIHRDVK  NILLDE+  A V DFGL+K     D +HV+TAV+G+ G++ PEY    Q +EK+DV+ FG++L+E++
Sbjct:  563 HRHLVSLIGYCDERSEMILVYEYMANGP----LRSHLYGADLPPLSWKQRLEICIGAARGLHYLHTGASQSIIHRDVKTTNILLDENLVAKVADFGLSKTGPSLDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVL 705          
BLAST of CF504619 vs. ExPASy Swiss-Prot
Match: CRK33_ARATH (Putative cysteine-rich receptor-like protein kinase 33 OS=Arabidopsis thaliana GN=CRK33 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 1.964e-32
Identity = 73/146 (50.00%), Postives = 99/146 (67.81%), Query Frame = 3
Query:   21 HRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKKIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHV-TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 455
            HRNL+ + GFC    E++LVY ++PN S+   L +    +  LDWA+R KI +GTARG+LYLH     KIIHRD+KA+NILLD + E  V DFG+A++     S   T  V GT G+I+PEYL  GQ S K+DV+ FG+L+LE+I+
Sbjct:  374 HRNLVGVLGFCMEGEEKILVYEFVPNKSLDQFLFEPTK-KGQLDWAKRYKIIVGTARGILYLHHDSPLKIIHRDLKASNILLDAEMEPKVADFGMARIFRVDQSRADTRRVVGTHGYISPEYLMHGQFSVKSDVYSFGVLVLEIIS 518          
BLAST of CF504619 vs. ExPASy Swiss-Prot
Match: Y5838_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 OS=Arabidopsis thaliana GN=At5g48380 PE=1 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 3.350e-32
Identity = 71/156 (45.51%), Postives = 103/156 (66.03%), Query Frame = 3
Query:    3 TISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLR--DHIHGRPALDWARRKKIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVR---GTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 455
            T+    +RNL+ L G+C    ERLL+Y YM NG +  +L   D    +P LDW  R KIA+GTA+GL +LH  C+P+IIHR++ +  ILL  +FE  + DFGLA+L++  D+H++T V    G  G++APEY  T  ++ K DV+ FG++LLEL+T
Sbjct:  349 TLGSVKNRNLVPLLGYCVANKERLLMYEYMANGYLYDQLHPADEESFKP-LDWPSRLKIAIGTAKGLAWLHHSCNPRIIHRNISSKCILLTAEFEPKISDFGLARLMNPIDTHLSTFVNGEFGDFGYVAPEYSRTMVATPKGDVYSFGVVLLELVT 503          
BLAST of CF504619 vs. ExPASy Swiss-Prot
Match: CRK40_ARATH (Cysteine-rich receptor-like protein kinase 40 OS=Arabidopsis thaliana GN=CRK40 PE=1 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 3.350e-32
Identity = 71/146 (48.63%), Postives = 98/146 (67.12%), Query Frame = 3
Query:   21 HRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKKIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHV-TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 455
            H+NL++L GFC+  +E +LVY ++PN S+   + D    R  L W  R +I  G ARGLLYLHE    KIIHRD+KA+NILLD +    V DFG A+L D  ++   T  + GT G++APEYL+ GQ S K+DV+ FG++LLE+I+
Sbjct:  401 HKNLVKLLGFCNEGDEEILVYEFVPNSSLDHFIFDE-DKRSLLTWEVRFRIIEGIARGLLYLHEDSQLKIIHRDLKASNILLDAEMNPKVADFGTARLFDSDETRAETKRIAGTRGYMAPEYLNHGQISAKSDVYSFGVMLLEMIS 545          
BLAST of CF504619 vs. ExPASy Swiss-Prot
Match: CRK37_ARATH (Cysteine-rich receptor-like protein kinase 37 OS=Arabidopsis thaliana GN=CRK37 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 3.350e-32
Identity = 71/146 (48.63%), Postives = 99/146 (67.81%), Query Frame = 3
Query:   21 HRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKKIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 455
            HRNL++L GFC+ ++E +LVY ++PN S+   + D    R  L W  R  I  G ARGLLYLHE    +IIHRD+KA+NILLD +    V DFG+A+L D  ++   T+ V GT G++APEY + GQ S K+DV+ FG++LLE+I+
Sbjct:  398 HRNLVKLLGFCNEKDEEILVYEFVPNSSLDHFIFDE-EKRRVLTWDVRYTIIEGVARGLLYLHEDSQLRIIHRDLKASNILLDAEMNPKVADFGMARLFDMDETRGQTSRVVGTYGYMAPEYATYGQFSTKSDVYSFGVMLLEMIS 542          
BLAST of CF504619 vs. ExPASy Swiss-Prot
Match: APK2A_ARATH (Protein kinase 2A, chloroplastic OS=Arabidopsis thaliana GN=APK2A PE=1 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 3.350e-32
Identity = 74/146 (50.68%), Postives = 100/146 (68.49%), Query Frame = 3
Query:   21 HRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKKIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDS-HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 455
            H NL+ L G+C+    RLLVY +MP GS+ + L     G   L WA R K+A+G A+GL +LHE    ++I+RD KAANILLD DF A + DFGLAK     D+ HV+T V GT G+ APEY++TG+ + K+DV+ FG++LLELI+
Sbjct:  149 HPNLVLLVGYCAEGENRLLVYEFMPKGSLENHL--FRRGAQPLTWAIRMKVAVGAAKGLTFLHE-AKSQVIYRDFKAANILLDADFNAKLSDFGLAKAGPTGDNTHVSTKVIGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELIS 291          
BLAST of CF504619 vs. ExPASy Swiss-Prot
Match: Y5169_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g16900 OS=Arabidopsis thaliana GN=At5g16900 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 4.376e-32
Identity = 71/146 (48.63%), Postives = 94/146 (64.38%), Query Frame = 3
Query:   21 HRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKKIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLD-HRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 455
            H NL+ L G+C  +    L+Y YM NG + S L    HG   L W  R  IA+ TA GL YLH  C P ++HRDVK+ NILLDE F+A + DFGL++      +SHV+T V GT G++ PEY  T + +EK+DV+ FGI+LLE+IT
Sbjct:  626 HINLVSLVGYCDEQAHLALIYEYMANGDLKSHLSGK-HGDCVLKWENRLSIAVETALGLEYLHSGCKPLMVHRDVKSMNILLDEHFQAKLADFGLSRSFSVGEESHVSTGVVGTPGYLDPEYYRTYRLTEKSDVYSFGIVLLEIIT 770          
BLAST of CF504619 vs. ExPASy Swiss-Prot
Match: BRL2_ARATH (Serine/threonine-protein kinase BRI1-like 2 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 4.376e-32
Identity = 69/158 (43.67%), Postives = 102/158 (64.56%), Query Frame = 3
Query:    3 TISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHG------RPALDWARRKKIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVT-TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 455
            T+    HRNL+ L G+C    ERLLVY +M  GS    L + +HG      R  L W  RKKIA G A+GL +LH  C P IIHRD+K++N+LLD+D EA V DFG+A+L+   D+H++ + + GT G++ PEY  + + + K DV+  G+++LE+++
Sbjct:  885 TLGKIKHRNLVPLLGYCKIGEERLLVYEFMQYGS----LEEVLHGPRTGEKRRILGWEERKKIAKGAAKGLCFLHHNCIPHIIHRDMKSSNVLLDQDMEARVSDFGMARLISALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSIGVVMLEILS 1038          
BLAST of CF504619 vs. ExPASy Swiss-Prot
Match: Y5182_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51820 OS=Arabidopsis thaliana GN=At1g51820 PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 5.715e-32
Identity = 71/149 (47.65%), Postives = 98/149 (65.77%), Query Frame = 3
Query:   21 HRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHG---RPALDWARRKKIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAK-LLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 455
            H+NL+ L G+C   +   L+Y YM NG     L++H+ G   R  L+W  R KI + +A+GL YLH  C P ++HRDVK  NILL+E FEA + DFGL++  L   ++HV+T V GT G++ PEY  T   +EK+DV+ FGILLLE+IT
Sbjct:  631 HKNLVGLVGYCDEGDNLALIYEYMANGD----LKEHMSGTRNRFILNWGTRLKIVIESAQGLEYLHNGCKPPMVHRDVKTTNILLNEHFEAKLADFGLSRSFLIEGETHVSTVVAGTPGYLDPEYHRTNWLTEKSDVYSFGILLLEIIT 775          
The following BLAST results are available for this feature:
BLAST of CF504619 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y5613_ARATH1.504e-3246.71Probable receptor-like protein kinase At5g61350 OS... [more]
THE1_ARATH1.964e-3248.30Receptor-like protein kinase THESEUS 1 OS=Arabidop... [more]
CRK33_ARATH1.964e-3250.00Putative cysteine-rich receptor-like protein kinas... [more]
Y5838_ARATH3.350e-3245.51Probably inactive leucine-rich repeat receptor-lik... [more]
CRK40_ARATH3.350e-3248.63Cysteine-rich receptor-like protein kinase 40 OS=A... [more]
CRK37_ARATH3.350e-3248.63Cysteine-rich receptor-like protein kinase 37 OS=A... [more]
APK2A_ARATH3.350e-3250.68Protein kinase 2A, chloroplastic OS=Arabidopsis th... [more]
Y5169_ARATH4.376e-3248.63Probable LRR receptor-like serine/threonine-protei... [more]
BRL2_ARATH4.376e-3243.67Serine/threonine-protein kinase BRI1-like 2 OS=Ara... [more]
Y5182_ARATH5.715e-3247.65Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-108 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-1_D06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504619 ID=CF504619; Name=CF504619; organism=Citrus sinensis; type=EST; length=456bp
AGACGATAAGTTTAGCTGTCCACCGGAATCTCCTCAGGCTCTGTGGTTTC
TGCTCTACTGAAAATGAAAGGCTTCTTGTTTATCCCTATATGCCAAATGG
TAGTGTAGCATCAAGATTAAGAGATCACATTCATGGTCGGCCAGCTTTAG
ATTGGGCAAGACGGAAAAAGATTGCCCTGGGCACGGCAAGGGGTCTGCTT
TATTTACATGAACAGTGTGACCCCAAAATTATCCACCGTGATGTCAAGGC
AGCCAACATTTTGCTGGATGAAGATTTTGAGGCAGTTGTCGGAGATTTTG
GATTAGCAAAGCTCTTGGATCACAGGGATTCCCATGTAACCACAGCTGTG
CGCGGCACTGTTGGCCATATTGCTCCAGAGTATTTATCAACGGGTCAGTC
TTCAGAAAAGACAGATGTATTTGGGTTTGGGATCTTGCTGCTTGAACTGA
TAACAG
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