CF504619

Overview
NameCF504619
Unique NameCF504619
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length456
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504619 vs. ExPASy Swiss-Prot
Match: CRK27_ARATH (Cysteine-rich receptor-like protein kinase 27 OS=Arabidopsis thaliana GN=CRK27 PE=2 SV=2)

HSP 1 Score: 136.346 bits (342), Expect = 5.715e-32
Identity = 72/146 (49.32%), Postives = 100/146 (68.49%), Query Frame = 3
Query:   21 HRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKKIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 455
            H+NL++L GF   E+ERLLVY ++PN S+   L D I  +  LDW +R  I +G +RGLLYLHE  +  IIHRD+K++N+LLDE     + DFG+A+  D  ++  VT  V GT G++APEY   G+ S KTDV+ FG+L+LE+IT
Sbjct:  386 HKNLVKLFGFSIKESERLLVYEFIPNTSLDRFLFDPIKQKQ-LDWEKRYNIIVGVSRGLLYLHEGSEFPIIHRDLKSSNVLLDEQMLPKISDFGMARQFDFDNTQAVTRRVVGTYGYMAPEYAMHGRFSVKTDVYSFGVLVLEIIT 530          
BLAST of CF504619 vs. ExPASy Swiss-Prot
Match: CRK10_ARATH (Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana GN=CRK10 PE=1 SV=2)

HSP 1 Score: 136.346 bits (342), Expect = 5.715e-32
Identity = 73/147 (49.66%), Postives = 99/147 (67.35%), Query Frame = 3
Query:   21 HRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKKIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKL--LDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 455
            HRNL+RL GFC    ER+LVY Y+PN S+   L D    +  LDW RR KI  G ARG+LYLH+     IIHRD+KA+NILLD D    + DFG+A++  LD  + + T+ + GT G+++PEY   GQ S K+DV+ FG+L+LE+I+
Sbjct:  390 HRNLVRLLGFCLDGEERVLVYEYVPNKSLDYFLFDPAK-KGQLDWTRRYKIIGGVARGILYLHQDSRLTIIHRDLKASNILLDADMNPKIADFGMARIFGLDQTEEN-TSRIVGTYGYMSPEYAMHGQYSMKSDVYSFGVLVLEIIS 534          
BLAST of CF504619 vs. ExPASy Swiss-Prot
Match: CX32_ARATH (Probable serine/threonine-protein kinase Cx32, chloroplastic OS=Arabidopsis thaliana GN=At4g35600 PE=1 SV=2)

HSP 1 Score: 135.961 bits (341), Expect = 7.464e-32
Identity = 72/152 (47.37%), Postives = 100/152 (65.79%), Query Frame = 3
Query:    6 ISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKKIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKL--LDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 455
            + +  HRNL++L G+C  + E LLVY +MP GS+ S L           W  R KI +G ARGL +LH     ++I+RD KA+NILLD +++A + DFGLAKL   D + SHVTT + GT G+ APEY++TG    K+DVF FG++LLE++T
Sbjct:  144 LGMLSHRNLVKLLGYCREDKELLLVYEFMPKGSLESHL---FRRNDPFPWDLRIKIVIGAARGLAFLHS-LQREVIYRDFKASNILLDSNYDAKLSDFGLAKLGPADEK-SHVTTRIMGTYGYAAPEYMATGHLYVKSDVFAFGVVLLEIMT 290          
BLAST of CF504619 vs. ExPASy Swiss-Prot
Match: Y5389_ARATH (Probable receptor-like protein kinase At5g38990 OS=Arabidopsis thaliana GN=At5g38990 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 1.273e-31
Identity = 70/151 (46.36%), Postives = 98/151 (64.90%), Query Frame = 3
Query:   21 HRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGR-----PALDWARRKKIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKL--LDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELI 452
            H +L+ L G+C  +NE +LVY YMP+G+    L+DH+  R     P L W RR +I +G ARGL YLH      IIHRD+K  NILLDE+F A V DFGL+++       +HV+T V+GT G++ PEY      +EK+DV+ FG++LLE++
Sbjct:  579 HVHLVSLIGYCDDDNEMVLVYEYMPHGT----LKDHLFRRDKASDPPLSWKRRLEICIGAARGLQYLHTGAKYTIIHRDIKTTNILLDENFVAKVSDFGLSRVGPTSASQTHVSTVVKGTFGYLDPEYYRRQILTEKSDVYSFGVVLLEVL 725          
BLAST of CF504619 vs. ExPASy Swiss-Prot
Match: WAKLQ_ARATH (Wall-associated receptor kinase-like 20 OS=Arabidopsis thaliana GN=WAKL20 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 1.273e-31
Identity = 70/155 (45.16%), Postives = 99/155 (63.87%), Query Frame = 3
Query:   21 HRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRP-----ALDWARRKKIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLD-----HRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 455
            HR+L+RL G C      LL+Y ++PNG+    L +H+HG        L W RR +IA  TA GL YLH    P I HRDVK++NILLDE   A V DFGL++L+D     + +SH+ T  +GT+G++ PEY    Q ++K+DV+ FG++LLE++T
Sbjct:  416 HRSLVRLLGCCVDLELPLLIYEFIPNGT----LFEHLHGSSDRTWKPLTWRRRLQIAYQTAEGLAYLHSAAQPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVDLTETANNESHIFTGAQGTLGYLDPEYYRNFQLTDKSDVYSFGVVLLEMVT 566          
BLAST of CF504619 vs. ExPASy Swiss-Prot
Match: CRK36_ARATH (Cysteine-rich receptor-like protein kinase 36 OS=Arabidopsis thaliana GN=CRK36 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 1.273e-31
Identity = 71/146 (48.63%), Postives = 99/146 (67.81%), Query Frame = 3
Query:   21 HRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKKIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 455
            HRNL++L GFC+  NE +LVY ++PN S+   + D    R  L W  R +I  G ARGLLYLHE    +IIHRD+KA+NILLD +    V DFG+A+L +  ++   T+ V GT G++APEY+  GQ S K+DV+ FG++LLE+I+
Sbjct:  393 HRNLVKLLGFCNEGNEEILVYEHVPNSSLDHFIFDE-DKRWLLTWDVRYRIIEGVARGLLYLHEDSQLRIIHRDLKASNILLDAEMNPKVADFGMARLFNMDETRGETSRVVGTYGYMAPEYVRHGQFSAKSDVYSFGVMLLEMIS 537          
BLAST of CF504619 vs. ExPASy Swiss-Prot
Match: Y5597_ARATH (Probable receptor-like protein kinase At5g59700 OS=Arabidopsis thaliana GN=At5g59700 PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 1.663e-31
Identity = 69/145 (47.59%), Postives = 99/145 (68.28%), Query Frame = 3
Query:   21 HRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKKIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRD-SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELI 452
            HR+L+ L G+C   NE +LVY YM NG++ S L  +  G  +L W +R +I +G+ARGL YLH      +IHRDVK+ANILLDE+  A V DFGL+K     D +HV+TAV+G+ G++ PEY    Q +EK+DV+ FG+++ E++
Sbjct:  535 HRHLVSLIGYCDENNEMILVYEYMENGTLKSHL--YGSGLLSLSWKQRLEICIGSARGLHYLHTGDAKPVIHRDVKSANILLDENLMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVMFEVL 677          
BLAST of CF504619 vs. ExPASy Swiss-Prot
Match: WAKLR_ARATH (Wall-associated receptor kinase-like 21 OS=Arabidopsis thaliana GN=WAKL21 PE=1 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 1.663e-31
Identity = 66/153 (43.14%), Postives = 99/153 (64.71%), Query Frame = 3
Query:    6 ISLAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKKIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKL---LDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 455
            +S   H NL+RL G C  + E  LVY +MPNG++   L+ H  G+P L W  R  IA  TA  + +LH   +P I HRD+K++NILLD +F + + DFGL++L    D   SH++TA +GT G++ P+Y    Q S+K+DV+ FG++L+E+I+
Sbjct:  360 LSSVSHPNLVRLLGCCFADGEPFLVYEFMPNGTLYQHLQ-HERGQPPLSWQLRLAIACQTANAIAHLHSSVNPPIYHRDIKSSNILLDHEFNSKISDFGLSRLGMSTDFEASHISTAPQGTPGYLDPQYHQDFQLSDKSDVYSFGVVLVEIIS 511          
BLAST of CF504619 vs. ExPASy Swiss-Prot
Match: Y5596_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g59680 OS=Arabidopsis thaliana GN=At5g59680 PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 2.172e-31
Identity = 68/149 (45.64%), Postives = 96/149 (64.43%), Query Frame = 3
Query:   21 HRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGR---PALDWARRKKIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLD-HRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 455
            H NL+ L G+C   +   L+Y ++PNG     LR H+ G+   P ++W  R +IA   A GL YLH  C P ++HRDVK  NILLDE ++A + DFGL++      +SHV+T + GT G++ PEY  T + SEK+DV+ FGI+LLE+IT
Sbjct:  633 HTNLVSLVGYCDEGDHLALIYEFVPNGD----LRQHLSGKGGKPIVNWGTRLRIAAEAALGLEYLHIGCTPPMVHRDVKTTNILLDEHYKAKLADFGLSRSFPVGGESHVSTVIAGTPGYLDPEYYHTSRLSEKSDVYSFGIVLLEMIT 777          
BLAST of CF504619 vs. ExPASy Swiss-Prot
Match: APK1A_ARATH (Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 2.172e-31
Identity = 71/147 (48.30%), Postives = 103/147 (70.07%), Query Frame = 3
Query:   21 HRNLLRLCGFCSTENERLLVYPYMPNGSVASRL-RDHIHGRPALDWARRKKIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRD-SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 455
            HR+L++L G+C  +  RLLVY +MP GS+ + L R  ++ +P L W  R K+ALG A+GL +LH   + ++I+RD K +NILLD ++ A + DFGLAK     D SHV+T V GT G+ APEYL+TG  + K+DV+ FG++LLEL++
Sbjct:  131 HRHLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRGLYFQP-LSWKLRLKVALGAAKGLAFLHSS-ETRVIYRDFKTSNILLDSEYNAKLSDFGLAKDGPIGDKSHVSTRVMGTHGYAAPEYLATGHLTTKSDVYSFGVVLLELLS 275          
The following BLAST results are available for this feature:
BLAST of CF504619 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CRK27_ARATH5.715e-3249.32Cysteine-rich receptor-like protein kinase 27 OS=A... [more]
CRK10_ARATH5.715e-3249.66Cysteine-rich receptor-like protein kinase 10 OS=A... [more]
CX32_ARATH7.464e-3247.37Probable serine/threonine-protein kinase Cx32, chl... [more]
Y5389_ARATH1.273e-3146.36Probable receptor-like protein kinase At5g38990 OS... [more]
WAKLQ_ARATH1.273e-3145.16Wall-associated receptor kinase-like 20 OS=Arabido... [more]
CRK36_ARATH1.273e-3148.63Cysteine-rich receptor-like protein kinase 36 OS=A... [more]
Y5597_ARATH1.663e-3147.59Probable receptor-like protein kinase At5g59700 OS... [more]
WAKLR_ARATH1.663e-3143.14Wall-associated receptor kinase-like 21 OS=Arabido... [more]
Y5596_ARATH2.172e-3145.64Probable LRR receptor-like serine/threonine-protei... [more]
APK1A_ARATH2.172e-3148.30Protein kinase APK1A, chloroplastic OS=Arabidopsis... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-108 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-1_D06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504619 ID=CF504619; Name=CF504619; organism=Citrus sinensis; type=EST; length=456bp
AGACGATAAGTTTAGCTGTCCACCGGAATCTCCTCAGGCTCTGTGGTTTC
TGCTCTACTGAAAATGAAAGGCTTCTTGTTTATCCCTATATGCCAAATGG
TAGTGTAGCATCAAGATTAAGAGATCACATTCATGGTCGGCCAGCTTTAG
ATTGGGCAAGACGGAAAAAGATTGCCCTGGGCACGGCAAGGGGTCTGCTT
TATTTACATGAACAGTGTGACCCCAAAATTATCCACCGTGATGTCAAGGC
AGCCAACATTTTGCTGGATGAAGATTTTGAGGCAGTTGTCGGAGATTTTG
GATTAGCAAAGCTCTTGGATCACAGGGATTCCCATGTAACCACAGCTGTG
CGCGGCACTGTTGGCCATATTGCTCCAGAGTATTTATCAACGGGTCAGTC
TTCAGAAAAGACAGATGTATTTGGGTTTGGGATCTTGCTGCTTGAACTGA
TAACAG
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