CF504624

Overview
NameCF504624
Unique NameCF504624
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length643
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504624 vs. ExPASy Swiss-Prot
Match: SGK1_HUMAN (Serine/threonine-protein kinase Sgk1 OS=Homo sapiens GN=SGK1 PE=1 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 4.516e-13
Identity = 41/102 (40.20%), Postives = 59/102 (57.84%), Query Frame = 2
Query:   47 PTGHIDNLPSENECVGLEDFEVLKVVGQGAFAKVYQVRRIGTLEIYAMKVMRKDKIMEKNHAEYMKSERNILTK-VDHPFIVQLRYSFQVMSYLYHT*DVLS 349
            P+  I+  PS N      DF  LKV+G+G+F KV   R       YA+KV++K  I++K   +++ SERN+L K V HPF+V L +SFQ    LY   D ++
Sbjct:   79 PSQQINLGPSSNPHAKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYIN 180          
BLAST of CF504624 vs. ExPASy Swiss-Prot
Match: SGK1B_XENLA (Serine/threonine-protein kinase Sgk1-B OS=Xenopus laevis GN=sgk1-B PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 5.898e-13
Identity = 41/118 (34.75%), Postives = 64/118 (54.24%), Query Frame = 2
Query:    8 PNNLSVVDAALGKPTGHIDNL---PSENECVGLEDFEVLKVVGQGAFAKVYQVRRIGTLEIYAMKVMRKDKIMEKNHAEYMKSERNILTK-VDHPFIVQLRYSFQVMSYLYHT*DVLS 349
            P    +++     P  H   +   PS N      DF+ LK++G+G+F KV   R     + YA+KV++K  I++K   +++ SERN+L K V HPF+V L +S Q  S LY   D ++
Sbjct:   66 PQESELLNENSSPPPSHSQQINLGPSSNPHAKPSDFQFLKIIGKGSFGKVLLARHKADEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSIQTTSRLYFILDYIN 183          
BLAST of CF504624 vs. ExPASy Swiss-Prot
Match: SAX1_CAEEL (Serine/threonine-protein kinase sax-1 OS=Caenorhabditis elegans GN=sax-1 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 5.898e-13
Identity = 35/78 (44.87%), Postives = 57/78 (73.08%), Query Frame = 2
Query:   95 LEDFEVLKVVGQGAFAKVYQVRRIGTLEIYAMKVMRKDKIMEKNHAEYMKSERNILTKVDHPFIVQLRYSFQVMSYLY 328
            + DFE LKV+G+GAF +V  V++  T  IYAMK++RK +++EK    ++++ER+IL++ D  ++V++ YSFQ  S LY
Sbjct:   84 VNDFESLKVIGRGAFGEVRLVQKHDTGHIYAMKILRKSEMVEKEQTAHVRAERDILSEADCDWVVKMYYSFQDYSNLY 161          
BLAST of CF504624 vs. ExPASy Swiss-Prot
Match: SAX1_CAEBR (Serine/threonine-protein kinase sax-1 OS=Caenorhabditis briggsae GN=sax-1 PE=3 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 5.898e-13
Identity = 35/78 (44.87%), Postives = 57/78 (73.08%), Query Frame = 2
Query:   95 LEDFEVLKVVGQGAFAKVYQVRRIGTLEIYAMKVMRKDKIMEKNHAEYMKSERNILTKVDHPFIVQLRYSFQVMSYLY 328
            + DFE LKV+G+GAF +V  V++  T  IYAMK++RK +++EK    ++++ER+IL++ D  ++V++ YSFQ  S LY
Sbjct:   84 VNDFESLKVIGRGAFGEVRLVQKHDTGHIYAMKILRKSEMVEKEQTAHVRAERDILSEADCDWVVKMYYSFQDYSNLY 161          
BLAST of CF504624 vs. ExPASy Swiss-Prot
Match: KS6B2_MOUSE (Ribosomal protein S6 kinase beta-2 OS=Mus musculus GN=Rps6kb2 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 5.898e-13
Identity = 44/93 (47.31%), Postives = 61/93 (65.59%), Query Frame = 2
Query:   83 ECVGLEDFEVLKVVGQGAFAKVYQVRRI-GTL--EIYAMKVMRKDKIM-EKNHAEYMKSERNILTKVDHPFIVQLRYSFQVMSYLYHT*DVLS 349
            E +G   FE+L V+G+G + KV+QVR++ GT   +IYAMKV+RK KI+       + ++ERNIL  V HPFIV+L Y+FQ    LY   + LS
Sbjct:   60 ERIGPHCFELLSVLGKGGYGKVFQVRKVQGTNLGKIYAMKVLRKAKIVCSAKDTAHTRAERNILESVKHPFIVELAYAFQTGGKLYLILECLS 152          
BLAST of CF504624 vs. ExPASy Swiss-Prot
Match: CBK1_YEAST (Serine/threonine-protein kinase CBK1 OS=Saccharomyces cerevisiae GN=CBK1 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 5.898e-13
Identity = 35/80 (43.75%), Postives = 55/80 (68.75%), Query Frame = 2
Query:   89 VGLEDFEVLKVVGQGAFAKVYQVRRIGTLEIYAMKVMRKDKIMEKNHAEYMKSERNILTKVDHPFIVQLRYSFQVMSYLY 328
            + LEDF  +KV+G+GAF +V  V++  T +IYAMK + K ++ +K+   ++K+ER++L   D P++V L YSFQ   YLY
Sbjct:  347 LSLEDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMYKKDQLAHVKAERDVLAGSDSPWVVSLYYSFQDAQYLY 426          
BLAST of CF504624 vs. ExPASy Swiss-Prot
Match: CBK1_DEBHA (Serine/threonine-protein kinase CBK1 OS=Debaryomyces hansenii GN=CBK1 PE=3 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 5.898e-13
Identity = 35/80 (43.75%), Postives = 55/80 (68.75%), Query Frame = 2
Query:   89 VGLEDFEVLKVVGQGAFAKVYQVRRIGTLEIYAMKVMRKDKIMEKNHAEYMKSERNILTKVDHPFIVQLRYSFQVMSYLY 328
            + LEDF  +KV+G+GAF +V  V++  T +IYAMK + K ++ +K+   ++K+ER++L   D P++V L YSFQ   YLY
Sbjct:  310 LSLEDFNTVKVIGKGAFGEVRLVQKRDTGKIYAMKTLLKSEMYKKDQLAHVKAERDVLAGSDSPWVVSLYYSFQDAQYLY 389          
BLAST of CF504624 vs. ExPASy Swiss-Prot
Match: CBK1_CANGA (Serine/threonine-protein kinase CBK1 OS=Candida glabrata GN=CBK1 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 5.898e-13
Identity = 40/99 (40.40%), Postives = 61/99 (61.62%), Query Frame = 2
Query:   32 AALGKPTGHIDNLPSENECVGLEDFEVLKVVGQGAFAKVYQVRRIGTLEIYAMKVMRKDKIMEKNHAEYMKSERNILTKVDHPFIVQLRYSFQVMSYLY 328
            A+LGK       L      + LEDF  ++V+G+GAF +V  V++  T +IYAMK + K ++ +K+   ++K+ER++L   D P+IV L YSFQ   YLY
Sbjct:  348 ASLGKKESQFLRLRRTR--LSLEDFHTVQVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMYKKDQLAHVKAERDVLAGTDSPWIVSLYYSFQDAQYLY 444          
BLAST of CF504624 vs. ExPASy Swiss-Prot
Match: CBK1_ASHGO (Serine/threonine-protein kinase CBK1 OS=Ashbya gossypii GN=CBK1 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 5.898e-13
Identity = 35/80 (43.75%), Postives = 55/80 (68.75%), Query Frame = 2
Query:   89 VGLEDFEVLKVVGQGAFAKVYQVRRIGTLEIYAMKVMRKDKIMEKNHAEYMKSERNILTKVDHPFIVQLRYSFQVMSYLY 328
            + LEDF  +KV+G+GAF +V  V++  T +IYAMK + K ++ +K+   ++K+ER++L   D P++V L YSFQ   YLY
Sbjct:  305 LSLEDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMYKKDQLAHVKAERDVLAGSDSPWVVSLYYSFQDAQYLY 384          
BLAST of CF504624 vs. ExPASy Swiss-Prot
Match: PKGA_DICDI (Probable serine/threonine-protein kinase pkgA OS=Dictyostelium discoideum GN=pkgA PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 7.703e-13
Identity = 34/94 (36.17%), Postives = 58/94 (61.70%), Query Frame = 2
Query:   95 LEDFEVLKVVGQGAFAKVYQVRRIGTLEIYAMKVMRKDKIMEKNHAEYMKSERNILTKVDHPFIVQLRYSFQVMSYLYHT*DVLSF*PCTGLCE 376
            + DFE +K + +G + KV+  ++I T +IYA+K ++K  +++KN  +++K ERNIL    +PF+V++ YSFQ   Y Y   + L    C  L +
Sbjct:  807 ISDFEFIKPITKGGYGKVFLAKKIRTGDIYAIKRLKKSDMIKKNQLDHVKVERNILAYTSNPFVVKMYYSFQTKEYYYLVMEYLQGGDCFSLLQ 900          
The following BLAST results are available for this feature:
BLAST of CF504624 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 114
Match NameE-valueIdentityDescription
SGK1_HUMAN4.516e-1340.20Serine/threonine-protein kinase Sgk1 OS=Homo sapie... [more]
SGK1B_XENLA5.898e-1334.75Serine/threonine-protein kinase Sgk1-B OS=Xenopus ... [more]
SAX1_CAEEL5.898e-1344.87Serine/threonine-protein kinase sax-1 OS=Caenorhab... [more]
SAX1_CAEBR5.898e-1344.87Serine/threonine-protein kinase sax-1 OS=Caenorhab... [more]
KS6B2_MOUSE5.898e-1347.31Ribosomal protein S6 kinase beta-2 OS=Mus musculus... [more]
CBK1_YEAST5.898e-1343.75Serine/threonine-protein kinase CBK1 OS=Saccharomy... [more]
CBK1_DEBHA5.898e-1343.75Serine/threonine-protein kinase CBK1 OS=Debaryomyc... [more]
CBK1_CANGA5.898e-1340.40Serine/threonine-protein kinase CBK1 OS=Candida gl... [more]
CBK1_ASHGO5.898e-1343.75Serine/threonine-protein kinase CBK1 OS=Ashbya gos... [more]
PKGA_DICDI7.703e-1336.17Probable serine/threonine-protein kinase pkgA OS=D... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-113 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-1_D12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504624 ID=CF504624; Name=CF504624; organism=Citrus sinensis; type=EST; length=643bp
GGAAGGGCCTAACAACCTATCTGTTGTTGATGCTGCCCTGGGGAAACCTA
CCGGGCACATAGATAATCTTCCTTCTGAAAACGAGTGTGTAGGACTTGAA
GATTTTGAGGTTTTGAAGGTTGTTGGCCAAGGTGCTTTTGCAAAAGTATA
CCAGGTGAGGAGGATCGGTACTTTAGAAATTTATGCAATGAAGGTCATGC
GCAAGGACAAGATTATGGAGAAAAATCATGCGGAATACATGAAATCTGAG
AGGAATATACTGACGAAAGTAGATCACCCCTTCATTGTGCAGCTCAGATA
CTCATTTCAAGTAATGTCTTATCTTTATCACACATAAGATGTTTTGTCTT
TTTAACCCTGCACCGGACTATGTGAATTCCATGCACTTTGCTTTGCCTTC
ATGATTCAGTTAATTAGTTAGTGATCTCAAGATTAGTTTGATCATGATAG
CAGATTTCCATTGCCCTACTTATGGAGCTTTGCATATTGTATACAGCAGT
TATATAAATTAATCTGTTCTGCAGACCAAATATAGACTGTACCTTGTGCT
TGATTTTGTCAATGGCGGCCACCTTTTCTTTCAGCTCTATCGCCAAGGCT
TGTTCAGGGAGGATTTGGCACGTATATATACTGCTGAGATTGT
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