CF504624

Overview
NameCF504624
Unique NameCF504624
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length643
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504624 vs. ExPASy Swiss-Prot
Match: KAPCB_BOVIN (cAMP-dependent protein kinase catalytic subunit beta OS=Bos taurus GN=PRKACB PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 3.236e-11
Identity = 35/86 (40.70%), Postives = 54/86 (62.79%), Query Frame = 2
Query:   71 PSENECVGLEDFEVLKVVGQGAFAKVYQVRRIGTLEIYAMKVMRKDKIMEKNHAEYMKSERNILTKVDHPFIVQLRYSFQVMSYLY 328
            P+ N   GLEDFE  K +G G+F +V  V+   T + YAMK++ K K+++    E+  +E+ IL  V+ PF+V+L Y+F+  S LY
Sbjct:   34 PAPNNA-GLEDFERKKTLGTGSFGRVMLVKHKATEQYYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVRLEYAFKDNSNLY 118          
BLAST of CF504624 vs. ExPASy Swiss-Prot
Match: DMPK_HUMAN (Myotonin-protein kinase OS=Homo sapiens GN=DMPK PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 3.236e-11
Identity = 31/77 (40.26%), Postives = 52/77 (67.53%), Query Frame = 2
Query:   98 EDFEVLKVVGQGAFAKVYQVRRIGTLEIYAMKVMRKDKIMEKNHAEYMKSERNILTKVDHPFIVQLRYSFQVMSYLY 328
            +DFE+LKV+G+GAF++V  V+   T ++YAMK+M K  ++++      + ER++L   D  +I QL ++FQ  +YLY
Sbjct:   79 DDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLY 155          
BLAST of CF504624 vs. ExPASy Swiss-Prot
Match: Y0701_DICDI (Probable serine/threonine-protein kinase DDB_G0272282 OS=Dictyostelium discoideum GN=DDB_G0272282 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.227e-11
Identity = 35/99 (35.35%), Postives = 57/99 (57.58%), Query Frame = 2
Query:   74 SENECVGLEDFEVLKVVGQGAFAKVYQVRRIGTLEIYAMKVMRKDKIMEKNHAEYMKSERNILTKVDHPFIVQLRYSFQVMSYLYHT*DVLSF*PCTGL 370
            S    + + DFE++K + +GAF +VY  ++  T ++YA+KV++K   + KN   ++  ERNIL  V + F+V+L Y+FQ    LY   + L    C  L
Sbjct: 1517 SNTTSISIADFEIIKPISRGAFGRVYLAQKKKTGDLYAIKVLKKLDTIRKNMVNHVIVERNILAMVQNEFVVKLFYAFQSTDKLYLVMEYLIGGDCASL 1615          
BLAST of CF504624 vs. ExPASy Swiss-Prot
Match: MRCKG_MOUSE (Serine/threonine-protein kinase MRCK gamma OS=Mus musculus GN=Cdc42bpg PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 4.227e-11
Identity = 31/77 (40.26%), Postives = 53/77 (68.83%), Query Frame = 2
Query:   98 EDFEVLKVVGQGAFAKVYQVRRIGTLEIYAMKVMRKDKIMEKNHAEYMKSERNILTKVDHPFIVQLRYSFQVMSYLY 328
            +DFE+LKV+G+GAF +V  VR+ G+ +I+AMK++ K +++++      + ER++L K D  ++  L Y+FQ   YLY
Sbjct:   69 DDFEILKVIGRGAFGEVAVVRQRGSGQIFAMKMLHKWEMLKRAETACFREERDVLVKGDSRWVTALHYAFQDEEYLY 145          
BLAST of CF504624 vs. ExPASy Swiss-Prot
Match: KS6AA_XENLA (Ribosomal protein S6 kinase 2 alpha OS=Xenopus laevis GN=rps6ka PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.227e-11
Identity = 38/85 (44.71%), Postives = 54/85 (63.53%), Query Frame = 2
Query:  101 DFEVLKVVGQGAFAKVYQVRRI---GTLEIYAMKVMRKDKIMEKNHAEYMKSERNILTKVDHPFIVQLRYSFQVMSYLYHT*DVL 346
            DF +LKV+GQG+F KV+ VR+I      ++YAMKV++K  +  ++     K ER+IL  V HPF+V+L Y+FQ    LY   D L
Sbjct:   61 DFVLLKVLGQGSFGKVFLVRKITPPDANQLYAMKVLKKATLKVRDRVR-TKMERDILADVHHPFVVRLHYAFQTEGKLYLILDFL 144          
BLAST of CF504624 vs. ExPASy Swiss-Prot
Match: KS6A1_RAT (Ribosomal protein S6 kinase alpha-1 OS=Rattus norvegicus GN=Rps6ka1 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.227e-11
Identity = 37/84 (44.05%), Postives = 55/84 (65.48%), Query Frame = 2
Query:  104 FEVLKVVGQGAFAKVYQVRRIGTLE---IYAMKVMRKDKIMEKNHAEYMKSERNILTKVDHPFIVQLRYSFQVMSYLYHT*DVL 346
            FE+LKV+GQG+F KV+ VR++   +   +YAMKV++K  +  ++     K ER+IL  V+HPF+V+L Y+FQ    LY   D L
Sbjct:   62 FELLKVLGQGSFGKVFLVRKVTRPDNGHLYAMKVLKKATLKVRDRVR-TKMERDILADVNHPFVVKLHYAFQTEGKLYLILDFL 144          
BLAST of CF504624 vs. ExPASy Swiss-Prot
Match: KS6A1_HUMAN (Ribosomal protein S6 kinase alpha-1 OS=Homo sapiens GN=RPS6KA1 PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 4.227e-11
Identity = 37/84 (44.05%), Postives = 55/84 (65.48%), Query Frame = 2
Query:  104 FEVLKVVGQGAFAKVYQVRRIGTLE---IYAMKVMRKDKIMEKNHAEYMKSERNILTKVDHPFIVQLRYSFQVMSYLYHT*DVL 346
            FE+LKV+GQG+F KV+ VR++   +   +YAMKV++K  +  ++     K ER+IL  V+HPF+V+L Y+FQ    LY   D L
Sbjct:   62 FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVR-TKMERDILADVNHPFVVKLHYAFQTEGKLYLILDFL 144          
BLAST of CF504624 vs. ExPASy Swiss-Prot
Match: KAPCB_PIG (cAMP-dependent protein kinase catalytic subunit beta OS=Sus scrofa GN=PRKACB PE=1 SV=3)

HSP 1 Score: 68.1662 bits (165), Expect = 4.227e-11
Identity = 35/86 (40.70%), Postives = 54/86 (62.79%), Query Frame = 2
Query:   71 PSENECVGLEDFEVLKVVGQGAFAKVYQVRRIGTLEIYAMKVMRKDKIMEKNHAEYMKSERNILTKVDHPFIVQLRYSFQVMSYLY 328
            P+ N   GLEDFE  K +G G+F +V  V+   T + YAMK++ K K+++    E+  +E+ IL  V+ PF+V+L +SF+  S LY
Sbjct:   34 PAPNNA-GLEDFERKKTLGTGSFGRVMLVKHKATEQYYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVRLEFSFKDNSNLY 118          
BLAST of CF504624 vs. ExPASy Swiss-Prot
Match: CTRO_MOUSE (Citron Rho-interacting kinase OS=Mus musculus GN=Cit PE=1 SV=3)

HSP 1 Score: 68.1662 bits (165), Expect = 4.227e-11
Identity = 33/76 (43.42%), Postives = 50/76 (65.79%), Query Frame = 2
Query:  101 DFEVLKVVGQGAFAKVYQVRRIGTLEIYAMKVMRKDKIMEKNHAEYMKSERNILTKVDHPFIVQLRYSFQVMSYLY 328
            DFEV  +VG G FA+V  VR   T ++YAMK+M+K  ++ +    + + ERNIL++   P+I QL+Y+FQ  + LY
Sbjct:   96 DFEVRSLVGCGHFAEVQVVREKATGDVYAMKIMKKKALLAQEQVSFFEEERNILSRSTSPWIPQLQYAFQDKNNLY 171          
BLAST of CF504624 vs. ExPASy Swiss-Prot
Match: AKT3_RAT (RAC-gamma serine/threonine-protein kinase OS=Rattus norvegicus GN=Akt3 PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 4.227e-11
Identity = 35/101 (34.65%), Postives = 54/101 (53.47%), Query Frame = 2
Query:   47 PTGHIDNLPSENECVG--------LEDFEVLKVVGQGAFAKVYQVRRIGTLEIYAMKVMRKDKIMEKNHAEYMKSERNILTKVDHPFIVQLRYSFQVMSYL 325
            PT  IDN+  E             + DF+ LK++G+G F KV  VR   + + YAMK+++K+ I+ K+   +  +E  +L    HPF+  L+YSFQ    L
Sbjct:  121 PTSQIDNIGEEEMDASTTHHKRKTMNDFDYLKLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRL 221          
The following BLAST results are available for this feature:
BLAST of CF504624 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 114
Match NameE-valueIdentityDescription
KAPCB_BOVIN3.236e-1140.70cAMP-dependent protein kinase catalytic subunit be... [more]
DMPK_HUMAN3.236e-1140.26Myotonin-protein kinase OS=Homo sapiens GN=DMPK PE... [more]
Y0701_DICDI4.227e-1135.35Probable serine/threonine-protein kinase DDB_G0272... [more]
MRCKG_MOUSE4.227e-1140.26Serine/threonine-protein kinase MRCK gamma OS=Mus ... [more]
KS6AA_XENLA4.227e-1144.71Ribosomal protein S6 kinase 2 alpha OS=Xenopus lae... [more]
KS6A1_RAT4.227e-1144.05Ribosomal protein S6 kinase alpha-1 OS=Rattus norv... [more]
KS6A1_HUMAN4.227e-1144.05Ribosomal protein S6 kinase alpha-1 OS=Homo sapien... [more]
KAPCB_PIG4.227e-1140.70cAMP-dependent protein kinase catalytic subunit be... [more]
CTRO_MOUSE4.227e-1143.42Citron Rho-interacting kinase OS=Mus musculus GN=C... [more]
AKT3_RAT4.227e-1134.65RAC-gamma serine/threonine-protein kinase OS=Rattu... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-113 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-1_D12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504624 ID=CF504624; Name=CF504624; organism=Citrus sinensis; type=EST; length=643bp
GGAAGGGCCTAACAACCTATCTGTTGTTGATGCTGCCCTGGGGAAACCTA
CCGGGCACATAGATAATCTTCCTTCTGAAAACGAGTGTGTAGGACTTGAA
GATTTTGAGGTTTTGAAGGTTGTTGGCCAAGGTGCTTTTGCAAAAGTATA
CCAGGTGAGGAGGATCGGTACTTTAGAAATTTATGCAATGAAGGTCATGC
GCAAGGACAAGATTATGGAGAAAAATCATGCGGAATACATGAAATCTGAG
AGGAATATACTGACGAAAGTAGATCACCCCTTCATTGTGCAGCTCAGATA
CTCATTTCAAGTAATGTCTTATCTTTATCACACATAAGATGTTTTGTCTT
TTTAACCCTGCACCGGACTATGTGAATTCCATGCACTTTGCTTTGCCTTC
ATGATTCAGTTAATTAGTTAGTGATCTCAAGATTAGTTTGATCATGATAG
CAGATTTCCATTGCCCTACTTATGGAGCTTTGCATATTGTATACAGCAGT
TATATAAATTAATCTGTTCTGCAGACCAAATATAGACTGTACCTTGTGCT
TGATTTTGTCAATGGCGGCCACCTTTTCTTTCAGCTCTATCGCCAAGGCT
TGTTCAGGGAGGATTTGGCACGTATATATACTGCTGAGATTGT
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