CF504632

Overview
NameCF504632
Unique NameCF504632
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length277
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504632 vs. ExPASy Swiss-Prot
Match: AMPM_BACHD (Methionine aminopeptidase OS=Bacillus halodurans GN=map PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 4.376e-19
Identity = 41/88 (46.59%), Postives = 60/88 (68.18%), Query Frame = 3
Query:   12 VKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSPTFFCGDVDDE 275
            ++PGITT ++D+     I  +GA PS  GY GF  S+C SVNE + HGIP +R L++GD I++D+    NGYHGD++ T+  G++ DE
Sbjct:   31 IQPGITTKKLDEIAETFIRSHGATPSFKGYNGFTGSICASVNEELVHGIPGNRVLKEGDIISVDIGAKYNGYHGDSAWTYAVGNISDE 118          
BLAST of CF504632 vs. ExPASy Swiss-Prot
Match: AMPM_BUCAP (Methionine aminopeptidase OS=Buchnera aphidicola subsp. Schizaphis graminum GN=map PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 7.464e-19
Identity = 42/87 (48.28%), Postives = 57/87 (65.52%), Query Frame = 3
Query:   12 VKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPD-SRALEDGDTINIDVTVYLNGYHGDTSPTFFCGDVD 269
            +KP I+T+EI+   H  II   A  + LGY GFPKS+C SVN+ +CHGIP+ ++ L+ GD +NIDVT+    YH DTS  F  G  +
Sbjct:   32 IKPNISTEEINNICHNFIIKKKAVSACLGYHGFPKSICISVNDVVCHGIPNKNQILKSGDIVNIDVTIIKKNYHADTSKMFLVGQTN 118          
BLAST of CF504632 vs. ExPASy Swiss-Prot
Match: AMPM_CLOAB (Methionine aminopeptidase OS=Clostridium acetobutylicum GN=map PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.663e-18
Identity = 42/88 (47.73%), Postives = 56/88 (63.64%), Query Frame = 3
Query:   15 KPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDS-RALEDGDTINIDVTVYLNGYHGDTSPTFFCGDVDDE 275
            KPG+TT ++D+     I    A PS  GYGGFP S+CTS+NE + HGIP   R L +GD I++D    LNGY GD + TF  G++ +E
Sbjct:   32 KPGVTTADLDRLAEDFIKKYNAIPSFKGYGGFPASICTSINEEVIHGIPSKHRVLHEGDIISVDCGAILNGYQGDAARTFAIGEISEE 119          
BLAST of CF504632 vs. ExPASy Swiss-Prot
Match: AMPM_CLOPE (Methionine aminopeptidase OS=Clostridium perfringens GN=map PE=3 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 3.704e-18
Identity = 42/88 (47.73%), Postives = 57/88 (64.77%), Query Frame = 3
Query:   12 VKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSPTFFCGDVDDE 275
            V+PGITT E+D+   + I  +GA PS  G  GFP S+C SVN  + HG P S  L+DGD ++ID  V LNG+H D + TF  G++ +E
Sbjct:   31 VRPGITTTELDRIAEEFITKHGATPSFKGLYGFPASLCISVNNQVIHGFPGSYELKDGDIVSIDCGVCLNGFHSDAARTFGVGNISEE 118          
BLAST of CF504632 vs. ExPASy Swiss-Prot
Match: AMPM_HAEIN (Methionine aminopeptidase OS=Haemophilus influenzae GN=map PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 8.252e-18
Identity = 41/85 (48.24%), Postives = 57/85 (67.06%), Query Frame = 3
Query:   12 VKPGITTDEIDKAVHQ-MIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIP-DSRALEDGDTINIDVTVYLNGYHGDTSPTFFCG 260
            VK G+TT E+D+  H+ M+ +    P+ L Y GFPK+ C S+NE +CHGIP D + L++GD +NIDVTV  +GY GD S  +  G
Sbjct:   32 VKAGVTTGELDRICHEYMVNEQKVIPACLNYHGFPKATCISINEVVCHGIPSDDKVLKNGDIVNIDVTVIKDGYFGDNSKMYIVG 116          
BLAST of CF504632 vs. ExPASy Swiss-Prot
Match: AMPM2_SYNY3 (Putative methionine aminopeptidase B OS=Synechocystis sp. (strain PCC 6803) GN=slr0786 PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 8.252e-18
Identity = 44/93 (47.31%), Postives = 64/93 (68.82%), Query Frame = 3
Query:    6 TLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYG--GFPK---SVCTSVNECICHGIPDSRA-LEDGDTINIDVTVYLNGYHGDTSPTFFCGDV 266
            ++V+PG++T  ++    + + D+GA  + LGY   G+P    ++CTS+NE +CHGIP+ +  L+DGD INIDVT+ L GYHGDTS TF  G V
Sbjct:   49 SMVQPGVSTQALNDEATRWMEDHGAISATLGYAPPGYPPFTGAICTSINEVVCHGIPNPKQILKDGDIINIDVTLRLAGYHGDTSRTFLVGSV 141          
BLAST of CF504632 vs. ExPASy Swiss-Prot
Match: AMPM_BUCBP (Methionine aminopeptidase OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=map PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 4.095e-17
Identity = 41/85 (48.24%), Postives = 57/85 (67.06%), Query Frame = 3
Query:   12 VKPGITTDEIDKAVHQMII-DNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRA-LEDGDTINIDVTVYLNGYHGDTSPTFFCG 260
            + PGITT+E++   H  I     A P+ LGY GFPKS+CTS+N+ +CHGIP+  + L++GD INIDV +  + Y+ D S  FF G
Sbjct:   33 IVPGITTEELNNICHNYITYKQHAKPACLGYQGFPKSICTSINDIVCHGIPNKNSILKNGDIINIDVAILKDKYYSDASKMFFVG 117          
BLAST of CF504632 vs. ExPASy Swiss-Prot
Match: AMPM_CHLTR (Methionine aminopeptidase OS=Chlamydia trachomatis GN=map PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 9.124e-17
Identity = 39/88 (44.32%), Postives = 60/88 (68.18%), Query Frame = 3
Query:   15 KPGITTDEIDKAVHQMIIDNGAYPSPLGYGG--FPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSPTFFCGDVDD 272
            K G+TT+E+D    ++   + A P+PL YG   FPK++CTS+NE ICHGIP+   L++GD +NIDV+  ++G++GD S     G+V +
Sbjct:   71 KEGVTTNELDLLSRELHKRHNAIPAPLNYGHPPFPKTICTSLNEVICHGIPNDIPLQNGDIMNIDVSCIVDGFYGDCSRMVMIGEVSE 158          
BLAST of CF504632 vs. ExPASy Swiss-Prot
Match: AMPM_BUCAI (Methionine aminopeptidase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=map PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 9.124e-17
Identity = 37/85 (43.53%), Postives = 59/85 (69.41%), Query Frame = 3
Query:   12 VKPGITTDEIDKAVHQMII-DNGAYPSPLGYGGFPKSVCTSVNECICHGIPD-SRALEDGDTINIDVTVYLNGYHGDTSPTFFCG 260
            ++P I+T++I++  H  I+    A  + LGY GFPKS+C S+N+ +CHGIP  ++  ++GD +NID+ +  +GYHGDTS  F+ G
Sbjct:   32 LQPKISTEDINQICHDYIVYKKKAISACLGYHGFPKSICISINDVVCHGIPSKNQVFKEGDIVNIDIAIIKDGYHGDTSKMFYIG 116          
BLAST of CF504632 vs. ExPASy Swiss-Prot
Match: AMPM_STAAW (Methionine aminopeptidase OS=Staphylococcus aureus (strain MW2) GN=map PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.192e-16
Identity = 38/86 (44.19%), Postives = 52/86 (60.47%), Query Frame = 3
Query:   15 KPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSPTFFCGDVDD 272
            KPGITT E+D    ++  + GA  +P+    FP   C SVNE + HGIP  R + +GD +NIDV+   NGY+ DT  +F  G+ DD
Sbjct:   31 KPGITTKELDNIAKELFEEYGAISAPIHDENFPGQTCISVNEEVAHGIPSKRVIREGDLVNIDVSALKNGYYADTGISFVVGESDD 116          
The following BLAST results are available for this feature:
BLAST of CF504632 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
AMPM_BACHD4.376e-1946.59Methionine aminopeptidase OS=Bacillus halodurans G... [more]
AMPM_BUCAP7.464e-1948.28Methionine aminopeptidase OS=Buchnera aphidicola s... [more]
AMPM_CLOAB1.663e-1847.73Methionine aminopeptidase OS=Clostridium acetobuty... [more]
AMPM_CLOPE3.704e-1847.73Methionine aminopeptidase OS=Clostridium perfringe... [more]
AMPM_HAEIN8.252e-1848.24Methionine aminopeptidase OS=Haemophilus influenza... [more]
AMPM2_SYNY38.252e-1847.31Putative methionine aminopeptidase B OS=Synechocys... [more]
AMPM_BUCBP4.095e-1748.24Methionine aminopeptidase OS=Buchnera aphidicola s... [more]
AMPM_CHLTR9.124e-1744.32Methionine aminopeptidase OS=Chlamydia trachomatis... [more]
AMPM_BUCAI9.124e-1743.53Methionine aminopeptidase OS=Buchnera aphidicola s... [more]
AMPM_STAAW1.192e-1644.19Methionine aminopeptidase OS=Staphylococcus aureus... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-121 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-1_E08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504632 ID=CF504632; Name=CF504632; organism=Citrus sinensis; type=EST; length=277bp
CTGGGACTTTAGTTAAGCCAGGTATTACAACAGATGAAATTGACAAAGCA
GTTCATCAAATGATTATTGATAATGGAGCATATCCCTCACCTCTTGGCTA
TGGTGGGTTTCCAAAGAGTGTCTGTACATCAGTGAATGAATGTATCTGCC
ACGGAATACCGGATTCCCGTGCACTTGAGGATGGTGATACTATAAATATT
GATGTGACTGTTTATCTAAATGGTTATCATGGTGATACATCACCGACTTT
CTTTTGTGGAGATGTTGATGATGAAGC
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