CF504632

Overview
NameCF504632
Unique NameCF504632
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length277
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504632 vs. ExPASy Swiss-Prot
Match: AMPM_STAAS (Methionine aminopeptidase OS=Staphylococcus aureus (strain MSSA476) GN=map PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.192e-16
Identity = 38/86 (44.19%), Postives = 52/86 (60.47%), Query Frame = 3
Query:   15 KPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSPTFFCGDVDD 272
            KPGITT E+D    ++  + GA  +P+    FP   C SVNE + HGIP  R + +GD +NIDV+   NGY+ DT  +F  G+ DD
Sbjct:   31 KPGITTKELDNIAKELFEEYGAISAPIHDENFPGQTCISVNEEVAHGIPSKRVIREGDLVNIDVSALKNGYYADTGISFVVGESDD 116          
BLAST of CF504632 vs. ExPASy Swiss-Prot
Match: AMPM_STAAR (Methionine aminopeptidase OS=Staphylococcus aureus (strain MRSA252) GN=map PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.192e-16
Identity = 38/86 (44.19%), Postives = 52/86 (60.47%), Query Frame = 3
Query:   15 KPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSPTFFCGDVDD 272
            KPGITT E+D    ++  + GA  +P+    FP   C SVNE + HGIP  R + +GD +NIDV+   NGY+ DT  +F  G+ DD
Sbjct:   31 KPGITTKELDNIAKELFEEYGAISAPIHDENFPGQTCISVNEEVAHGIPSKRVIREGDLVNIDVSALKNGYYADTGISFVVGESDD 116          
BLAST of CF504632 vs. ExPASy Swiss-Prot
Match: AMPM_STAAN (Methionine aminopeptidase OS=Staphylococcus aureus (strain N315) GN=map PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.192e-16
Identity = 38/86 (44.19%), Postives = 52/86 (60.47%), Query Frame = 3
Query:   15 KPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSPTFFCGDVDD 272
            KPGITT E+D    ++  + GA  +P+    FP   C SVNE + HGIP  R + +GD +NIDV+   NGY+ DT  +F  G+ DD
Sbjct:   31 KPGITTKELDNIAKELFEEYGAISAPIHDENFPGQTCISVNEEVAHGIPSKRVIREGDLVNIDVSALKNGYYADTGISFVVGESDD 116          
BLAST of CF504632 vs. ExPASy Swiss-Prot
Match: AMPM_STAAM (Methionine aminopeptidase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=map PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.192e-16
Identity = 38/86 (44.19%), Postives = 52/86 (60.47%), Query Frame = 3
Query:   15 KPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSPTFFCGDVDD 272
            KPGITT E+D    ++  + GA  +P+    FP   C SVNE + HGIP  R + +GD +NIDV+   NGY+ DT  +F  G+ DD
Sbjct:   31 KPGITTKELDNIAKELFEEYGAISAPIHDENFPGQTCISVNEEVAHGIPSKRVIREGDLVNIDVSALKNGYYADTGISFVVGESDD 116          
BLAST of CF504632 vs. ExPASy Swiss-Prot
Match: AMPM_STAAC (Methionine aminopeptidase OS=Staphylococcus aureus (strain COL) GN=map PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.192e-16
Identity = 38/86 (44.19%), Postives = 52/86 (60.47%), Query Frame = 3
Query:   15 KPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSPTFFCGDVDD 272
            KPGITT E+D    ++  + GA  +P+    FP   C SVNE + HGIP  R + +GD +NIDV+   NGY+ DT  +F  G+ DD
Sbjct:   31 KPGITTKELDNIAKELFEEYGAISAPIHDENFPGQTCISVNEEVAHGIPSKRVIREGDLVNIDVSALKNGYYADTGISFVVGESDD 116          
BLAST of CF504632 vs. ExPASy Swiss-Prot
Match: AMPM_STAA1 (Methionine aminopeptidase OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=map PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.192e-16
Identity = 38/86 (44.19%), Postives = 52/86 (60.47%), Query Frame = 3
Query:   15 KPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSPTFFCGDVDD 272
            KPGITT E+D    ++  + GA  +P+    FP   C SVNE + HGIP  R + +GD +NIDV+   NGY+ DT  +F  G+ DD
Sbjct:   31 KPGITTKELDNIAKELFEEYGAISAPIHDENFPGQTCISVNEEVAHGIPSKRVIREGDLVNIDVSALKNGYYADTGISFVVGESDD 116          
BLAST of CF504632 vs. ExPASy Swiss-Prot
Match: AMPM_CHLMU (Methionine aminopeptidase OS=Chlamydia muridarum GN=map PE=3 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 1.556e-16
Identity = 39/88 (44.32%), Postives = 59/88 (67.05%), Query Frame = 3
Query:   15 KPGITTDEIDKAVHQMIIDNGAYPSPLGYGG--FPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSPTFFCGDVDD 272
            K G+TT+E+D+    +     A P+PL YG   FPK++CTS+NE ICHGIP+   L++GD +NIDV+  ++G++GD S     G+V +
Sbjct:   71 KEGVTTNELDQLSCNLHKQYNAIPAPLNYGQPPFPKTICTSLNEVICHGIPNDTPLQNGDIMNIDVSCIVDGFYGDCSRMVMIGEVPE 158          
BLAST of CF504632 vs. ExPASy Swiss-Prot
Match: AMPM_BORBU (Methionine aminopeptidase OS=Borrelia burgdorferi GN=map PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 2.033e-16
Identity = 40/86 (46.51%), Postives = 55/86 (63.95%), Query Frame = 3
Query:   12 VKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSPTFFCGDVD 269
            + PGI+T E+D   +  II N A P+  GY GF  ++C SVNE + HGIP  R L DGD ++ID  V L+G++ D + TF  G+VD
Sbjct:   33 IVPGISTKELDLIAYDFIIKNRAKPAFKGYRGFKGTICASVNEEVIHGIPGKRKLADGDIVSIDCGVILDGFYSDMAKTFKVGNVD 118          
BLAST of CF504632 vs. ExPASy Swiss-Prot
Match: AMPM_CHLPN (Methionine aminopeptidase OS=Chlamydia pneumoniae GN=map PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.009e-15
Identity = 38/86 (44.19%), Postives = 57/86 (66.28%), Query Frame = 3
Query:   21 GITTDEIDKAVHQMIIDNGAYPSPLGYGG--FPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSPTFFCGDVDD 272
            G+TT+E+D+   ++     A  +P  YG   FPK++CTS+NE ICHGIP+   L+DGD +NIDV+  ++GY+GD S     G+V +
Sbjct:   73 GVTTNELDELSQELHKKYDAIAAPFHYGSPPFPKTICTSLNEVICHGIPNDIPLKDGDIMNIDVSCIVDGYYGDCSRMVMIGEVPE 158          
BLAST of CF504632 vs. ExPASy Swiss-Prot
Match: AMPM_STAES (Methionine aminopeptidase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=map PE=3 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 2.935e-15
Identity = 36/85 (42.35%), Postives = 50/85 (58.82%), Query Frame = 3
Query:   15 KPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSPTFFCGDVD 269
            KPG+TT E+D     +  ++GA  +P+    FP   C SVNE + HGIP  R + +GD +NIDV+   NGY+ DT  +F  G  D
Sbjct:   31 KPGVTTRELDHIAKDLFEEHGAISAPIHDENFPGQTCISVNEEVAHGIPGKRVIREGDLVNIDVSALKNGYYADTGISFVVGKSD 115          
The following BLAST results are available for this feature:
BLAST of CF504632 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
AMPM_STAAS1.192e-1644.19Methionine aminopeptidase OS=Staphylococcus aureus... [more]
AMPM_STAAR1.192e-1644.19Methionine aminopeptidase OS=Staphylococcus aureus... [more]
AMPM_STAAN1.192e-1644.19Methionine aminopeptidase OS=Staphylococcus aureus... [more]
AMPM_STAAM1.192e-1644.19Methionine aminopeptidase OS=Staphylococcus aureus... [more]
AMPM_STAAC1.192e-1644.19Methionine aminopeptidase OS=Staphylococcus aureus... [more]
AMPM_STAA11.192e-1644.19Methionine aminopeptidase OS=Staphylococcus aureus... [more]
AMPM_CHLMU1.556e-1644.32Methionine aminopeptidase OS=Chlamydia muridarum G... [more]
AMPM_BORBU2.033e-1646.51Methionine aminopeptidase OS=Borrelia burgdorferi ... [more]
AMPM_CHLPN1.009e-1544.19Methionine aminopeptidase OS=Chlamydia pneumoniae ... [more]
AMPM_STAES2.935e-1542.35Methionine aminopeptidase OS=Staphylococcus epider... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-121 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-1_E08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504632 ID=CF504632; Name=CF504632; organism=Citrus sinensis; type=EST; length=277bp
CTGGGACTTTAGTTAAGCCAGGTATTACAACAGATGAAATTGACAAAGCA
GTTCATCAAATGATTATTGATAATGGAGCATATCCCTCACCTCTTGGCTA
TGGTGGGTTTCCAAAGAGTGTCTGTACATCAGTGAATGAATGTATCTGCC
ACGGAATACCGGATTCCCGTGCACTTGAGGATGGTGATACTATAAATATT
GATGTGACTGTTTATCTAAATGGTTATCATGGTGATACATCACCGACTTT
CTTTTGTGGAGATGTTGATGATGAAGC
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