CF504656

Overview
NameCF504656
Unique NameCF504656
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length601
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13353 contig Csv1_Contig13353:842..1439. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF504656 vs. ExPASy Swiss-Prot
Match: Y5181_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51810 OS=Arabidopsis thaliana GN=At1g51810 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 7.686e-25
Identity = 67/174 (38.51%), Postives = 97/174 (55.75%), Query Frame = 2
Query:    5 YLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTVGSHLMSALL*RVVLAIWTQSTIRRQQLTEKSDVYSFGVVLFEILCARPALNPTLPKEQVSLAEWAAHCHKKGILEQIMDPYLKGKIAPECFKKFAETAMKCVSDQGIERPSMGDVLWNLEFALQLQESAEES 526
            YLH G K  ++HRDVKTTNILL+E +  K++DFGLS++ P  G   +S ++    +        R   LTEKSDVYSFGVVL  ++  +P ++    +E+  +AEW      KG ++ I DP L G        K  E AM C++   + RP+M  V++ L+  L  + S E S
Sbjct:  689 YLHNGCKPLMVHRDVKTTNILLNEHFDTKLADFGLSRSFPIEGETHVSTVV-AGTIGYLDPEYYRTNWLTEKSDVYSFGVVLLVMITNQPVIDQN--REKRHIAEWVGGMLTKGDIKSITDPNLLGDYNSGSVWKAVELAMSCMNPSSMTRPTMSQVVFELKECLASESSREVS 859          
BLAST of CF504656 vs. ExPASy Swiss-Prot
Match: Y5487_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g48740 OS=Arabidopsis thaliana GN=At5g48740 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.004e-24
Identity = 73/171 (42.69%), Postives = 95/171 (55.56%), Query Frame = 2
Query:    5 YLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTV-GSHLMSALL*RVVLAIWTQSTIRRQQLTEKSDVYSFGVVLFEILCARPALNPTLPKEQVSLAEWAAHCHKKGILEQIMDPYLKGKIAPECFKKFAETAMKCVSDQGIERPSMGDVLWNLEFALQLQES 514
            YLH G++  IIHRDVK++NILLD+   AKVSDFGLSK       SH+ + +  +              QLTEKSDVYSFGVVL E++C R  L+ +   +  +L  WA    + G  E I+D  LK    P   KK A  A++CV      RPS+ +VL  L+ A  LQ S
Sbjct:  719 YLHNGSEPRIIHRDVKSSNILLDKDMNAKVSDFGLSKQFTKADASHITTVV--KGTAGYLDPEYYSTLQLTEKSDVYSFGVVLLELICGREPLSHSGSPDSFNLVLWARPNLQAGAFE-IVDDILKETFDPASMKKAASIAIRCVGRDASGRPSIAEVLTKLKEAYSLQLS 886          
BLAST of CF504656 vs. ExPASy Swiss-Prot
Match: CRI4_MAIZE (Putative receptor protein kinase CRINKLY4 OS=Zea mays GN=CR4 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.004e-24
Identity = 74/167 (44.31%), Postives = 92/167 (55.09%), Query Frame = 2
Query:    5 YLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTVGSHLMSALL*RVVLAIWTQSTIRRQQLTEKSDVYSFGVVLFEILCARPALNPTLPKEQVSLAEWAAHCHKKGILEQIMDPYLKGKIAPECFKKFAETAMKCVSDQGIERPSMGDVLWNLEFALQL 505
            YLH  A   +IHRD+K++NIL+DE   A+V+DFGLS  GP      +S L     L        R   LT KSDVYSFGVVL EIL  R A++  +  E+ ++ EWA    K G +  I+DP L      E  KK A  A KCV  +G +RPSM  V   LE AL L
Sbjct:  621 YLHGYACPPVIHRDIKSSNILIDEDHNARVADFGLSILGPADSGTPLSELP-AGTLGYLDPEYYRLHYLTTKSDVYSFGVVLLEILSGRKAID--MQFEEGNIVEWAVPLIKAGDIFAILDPVLSPPSDLEALKKIASVACKCVRMRGKDRPSMDKVTTALEHALAL 784          
BLAST of CF504656 vs. ExPASy Swiss-Prot
Match: Y5188_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51880 OS=Arabidopsis thaliana GN=At1g51880 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.236e-24
Identity = 68/176 (38.64%), Postives = 97/176 (55.11%), Query Frame = 2
Query:    5 YLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTVGSHLMSALL*RVVLAIWTQSTIRRQQLTEKSDVYSFGVVLFEILCARPALNPTLPKEQVSLAEWAAHCHKKGILEQIMDPYLKGKIAPECFKKFAETAMKCVSDQGIERPSMGDVLWNLEFALQLQESAEESGK 532
            YLH G    ++HRDVKTTNILL+E++ AK++DFGLS++ P  G   +S ++             R   L+EKSDVYSFGVVL EI+  +P  + T  +E+  + EW      KG ++ I+DP L G        K  E A+ CV+     RP+M  V+  L   + L E+A   G+
Sbjct:  677 YLHNGCTPPMVHRDVKTTNILLNERYGAKLADFGLSRSFPVDGESHVSTVV-AGTPGYLDPEYYRTNWLSEKSDVYSFGVVLLEIVTNQPVTDKT--RERTHINEWVGSMLTKGDIKSILDPKLMGDYDTNGAWKIVELALACVNPSSNRRPTMAHVVTELNECVAL-ENARRQGR 848          
BLAST of CF504656 vs. ExPASy Swiss-Prot
Match: ACR4_ARATH (Serine/threonine-protein kinase-like protein ACR4 OS=Arabidopsis thaliana GN=ACR4 PE=1 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.236e-24
Identity = 72/165 (43.64%), Postives = 93/165 (56.36%), Query Frame = 2
Query:    5 YLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTVGSHLMSALL*RVVLAIWTQSTIRRQQLTEKSDVYSFGVVLFEILCARPALNPTLPKEQVSLAEWAAHCHKKGILEQIMDPYLKGKIAPECFKKFAETAMKCVSDQGIERPSMGDVLWNLEFAL 499
            YLH  A   +IHRD+K++NIL+DE+  A+V+DFGLS  GP V S    A L    L        R   LT KSDVYSFGV+L EIL  R A++  +  E+ ++ EWA    K G +  ++DP LK     E  K+    A KCV  +G +RPSM  V   LE AL
Sbjct:  628 YLHGYACPPVIHRDIKSSNILIDEEHNARVADFGLSLLGP-VDSGSPLAELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVLLLEILSGRKAID--MHYEEGNIVEWAVPLIKAGDINALLDPVLKHPSEIEALKRIVSVACKCVRMRGKDRPSMDKVTTALERAL 789          
BLAST of CF504656 vs. ExPASy Swiss-Prot
Match: Y1756_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07560 OS=Arabidopsis thaliana GN=At1g07560 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 8.498e-24
Identity = 64/165 (38.79%), Postives = 94/165 (56.97%), Query Frame = 2
Query:    5 YLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTVGSHLMSALL*RVVLAIWTQSTIRRQQLTEKSDVYSFGVVLFEILCARPALNPTLPKEQVSLAEWAAHCHKKGILEQIMDPYLKGKIAPECFKKFAETAMKCVSDQGIERPSMGDVLWNLEFAL 499
            YLH G K  I+HRDVK++NILLD++  AK++DFGLS++ P +G     + L             +  +L+EKSDVYSFGVVL EI+  +P ++    ++   +AEW      +G +  IMDP L+G        K  E AM CV+   ++RP+M  V+  L+  L
Sbjct:  679 YLHIGCKPLIVHRDVKSSNILLDDQLQAKLADFGLSRSFP-IGDESHVSTLVAGTFGYLDHEYYQTNRLSEKSDVYSFGVVLLEIITNKPVIDHN--RDMPHIAEWVKLMLTRGDISNIMDPKLQGVYDSGSAWKALELAMTCVNPSSLKRPNMSHVVHELKECL 840          
BLAST of CF504656 vs. ExPASy Swiss-Prot
Match: Y1518_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51860 OS=Arabidopsis thaliana GN=At1g51860 PE=2 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 1.450e-23
Identity = 64/176 (36.36%), Postives = 97/176 (55.11%), Query Frame = 2
Query:    5 YLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTVGSHLMSALL*RVVLAIWTQSTIRRQQLTEKSDVYSFGVVLFEILCARPALNPTLPKEQVSLAEWAAHCHKKGILEQIMDPYLKGKIAPECFKKFAETAMKCVSDQGIERPSMGDVLWNLEFALQLQESAEESGK 532
            YLH G +  ++HRDVKTTNILL+E+  AK++DFGLS++ P  G   +S ++             R   L+EKSDVYSFGVVL EI+  +P ++ T  +E+  + +W      KG ++ I+DP L G        K  E A+ CV+     RP+M  V+  L   + L+ +  +  +
Sbjct:  695 YLHNGCRPPMVHRDVKTTNILLNERCGAKLADFGLSRSFPIDGECHVSTVV-AGTPGYLDPEYYRTNWLSEKSDVYSFGVVLLEIVTNQPVIDKT--RERPHINDWVGFMLTKGDIKSIVDPKLMGDYDTNGAWKIVELALACVNPSSNRRPTMAHVVMELNDCVALENARRQGSE 867          
BLAST of CF504656 vs. ExPASy Swiss-Prot
Match: RLK6_ARATH (Receptor-like protein kinase At3g21340 OS=Arabidopsis thaliana GN=At3g21340 PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.450e-23
Identity = 67/185 (36.22%), Postives = 97/185 (52.43%), Query Frame = 2
Query:    5 YLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTVGSHLMSALL*RVVLAIWTQSTIRRQQLTEKSDVYSFGVVLFEILCARPALNPTLPKEQVSLAEWAAHCHKKGILEQIMDPYLKGKIAPECFKKFAETAMKCVSDQGIERPSMGDVLWNLEFALQLQESAEESGKVLGGGMDIE 559
            YLH G K  ++HRDVKTTNILL+E   AK++DFGLS++ P  G   +S ++             R   L EKSDVYSFG+VL EI+  +  +N +  +E+  +AEW      KG ++ IMDP L G        +  E AM C++     RP+M  V+  L   L  + +   + + +     IE
Sbjct:  704 YLHNGCKPPMVHRDVKTTNILLNEHLHAKLADFGLSRSFPIEGETHVSTVV-AGTPGYLDPEYYRTNWLNEKSDVYSFGIVLLEIITNQLVINQS--REKPHIAEWVGLMLTKGDIQNIMDPKLYGDYDSGSVWRAVELAMSCLNPSSARRPTMSQVVIELNECLSYENARGGTSQNMNSESSIE 885          
BLAST of CF504656 vs. ExPASy Swiss-Prot
Match: Y4245_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g20450 OS=Arabidopsis thaliana GN=At4g20450 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 2.473e-23
Identity = 68/176 (38.64%), Postives = 95/176 (53.98%), Query Frame = 2
Query:    5 YLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTVGSHLMSALL*RVVLAIWTQSTIRRQQLTEKSDVYSFGVVLFEILCARPALNPTLPKEQVSLAEWAAHCHKKGILEQIMDPYLKGKIAPECFKKFAETAMKCVSDQGIERPSMGDVLWNLEFALQLQESAEESGK 532
            YLH G K  +IHRD+K+ NILLD  + AK+ DFGLS++ P VGS    +               R   LTEKSDV+SFGVVL EI+ ++P ++ T  +E+  + EW       G ++ I+DP + G        K  E AM CVS     RP+M  V   L+  L L E++ + G+
Sbjct:  703 YLHIGCKPPMIHRDIKSMNILLDNNFQAKLGDFGLSRSFP-VGSETHVSTNVAGSPGYLDPEYYRTNWLTEKSDVFSFGVVLLEIITSQPVIDQT--REKSHIGEWVGFKLTNGDIKNIVDPSMNGDYDSSSLWKALELAMSCVSPSSSGRPNMSQVANELQECL-LTENSRKGGR 874          
BLAST of CF504656 vs. ExPASy Swiss-Prot
Match: Y4291_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g29180 OS=Arabidopsis thaliana GN=At4g29180 PE=2 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 3.229e-23
Identity = 62/173 (35.84%), Postives = 98/173 (56.65%), Query Frame = 2
Query:    5 YLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTVG-SHLMSALL*RVVLAIWTQSTIRRQQLTEKSDVYSFGVVLFEILCARPALNPTLPKEQVSLAEWAAHCHKKGILEQIMDPYLKGKIAPECFKKFAETAMKCVSDQGIERPSMGDVLWNLEFALQLQESAE 520
            YLH G +  I+HRDVKT NILL++   AK++DFGLSK  P    SH+++A++                +L EKSDVYSFG+VL E++  + ++  T   E++++  +     K G ++ ++DP L G  +     KF E AM CV D+G  RP+   ++ +L+  L  + + E
Sbjct:  691 YLHHGCRPPIVHRDVKTANILLNDNLEAKIADFGLSKVFPEDDLSHVVTAVM--GTPGYVDPEYYNTFKLNEKSDVYSFGIVLLELITGKRSIMKTDDGEKMNVVHYVEPFLKMGDIDGVVDPRLHGDFSSNSAWKFVEVAMSCVRDRGTNRPNTNQIVSDLKQCLAAELARE 861          
The following BLAST results are available for this feature:
BLAST of CF504656 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 182
Match NameE-valueIdentityDescription
Y5181_ARATH7.686e-2538.51Probable LRR receptor-like serine/threonine-protei... [more]
Y5487_ARATH1.004e-2442.69Probable LRR receptor-like serine/threonine-protei... [more]
CRI4_MAIZE1.004e-2444.31Putative receptor protein kinase CRINKLY4 OS=Zea m... [more]
Y5188_ARATH2.236e-2438.64Probable LRR receptor-like serine/threonine-protei... [more]
ACR4_ARATH2.236e-2443.64Serine/threonine-protein kinase-like protein ACR4 ... [more]
Y1756_ARATH8.498e-2438.79Probable LRR receptor-like serine/threonine-protei... [more]
Y1518_ARATH1.450e-2336.36Probable LRR receptor-like serine/threonine-protei... [more]
RLK6_ARATH1.450e-2336.22Receptor-like protein kinase At3g21340 OS=Arabidop... [more]
Y4245_ARATH2.473e-2338.64Probable LRR receptor-like serine/threonine-protei... [more]
Y4291_ARATH3.229e-2335.84Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-145 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-1_G12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504656 ID=CF504656; Name=CF504656; organism=Citrus sinensis; type=EST; length=601bp
ACACTATCTCCACACTGGTGCCAAACACACGATTATCCACAGAGATGTTA
AGACTACCAATATTCTTTTGGACGAGAAGTGGGTGGCAAAGGTTTCTGAT
TTTGGTTTGTCAAAAACAGGTCCCACCGTTGGATCACACCTCATGTCAGC
ACTGTTGTGAAGGGTAGTTTTGGCTATTTGGACCCAGAGTACTATCAGGC
GTCAGCAACTAACAGAGAAGTCTGATGTTTATTCTTTTGGTGTCGTGCTC
TTCGAAATCCTGTGTGCTCGACCAGCCTTAAACCCAACTTTGCCCAAGGA
GCAAGTGAGCTTGGCTGAGTGGGCTGCTCATTGTCACAAGAAAGGAATAC
TCGAACAGATTATGGACCCTTATCTCAAGGGAAAGATTGCACCTGAATGC
TTCAAAAAGTTTGCCGAGACAGCAATGAAGTGTGTATCTGATCAAGGTAT
TGAGAGGCCATCAATGGGCGATGTGCTGTGGAACCTAGAGTTCGCTTTGC
AGCTACAAGAGAGTGCAGAGGAAAGCGGCAAAGTTCTTGGCGGAGGAATG
GACATTGAGGAAGGAGCATTTGATGTCGACTGTAAAGGTAAGAAAGATCC
C
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