CF504656

Overview
NameCF504656
Unique NameCF504656
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length601
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13353 contig Csv1_Contig13353:842..1439. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF504656 vs. ExPASy Swiss-Prot
Match: Y2899_ARATH (Probable leucine-rich repeat receptor-like protein kinase At2g28990 OS=Arabidopsis thaliana GN=At2g28990 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 3.229e-23
Identity = 70/185 (37.84%), Postives = 98/185 (52.97%), Query Frame = 2
Query:    5 YLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTVGSHLMSALL*RVVLAIWTQSTIRRQQLTEKSDVYSFGVVLFEILCARPALNPTLPKEQVSLAEWAAHCHKKGILEQIMDPYLKGKIAPECFKKFAETAMKCVSDQGIERPSMGDVLWNLEFALQLQESAEESGKVLGGGMDIE 559
            YLHTG    ++HRD+KTTNILLD+   AK++DFGLS++ P +G+    + +             +   LTEKSD+YSFG+VL EI+  RP +  +  +E+  + EW +    KG L  IMDP L          K  E AM CVS     RP+M  V+  L+  L  + S       +G G D+E
Sbjct:  689 YLHTGCVPPMVHRDIKTTNILLDQHLQAKLADFGLSRSFP-IGNEKNVSTVVAGTPGYLDPEYYQTNWLTEKSDIYSFGIVLLEIISNRPIIQQS--REKPHIVEWVSFMITKGDLRSIMDPNLHQDYDIGSVWKAIELAMSCVSLSSARRPNMSRVVNELKECLISETSR------IGEGRDME 864          
BLAST of CF504656 vs. ExPASy Swiss-Prot
Match: RKF3_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RKF3 OS=Arabidopsis thaliana GN=RKF3 PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 3.229e-23
Identity = 65/162 (40.12%), Postives = 94/162 (58.02%), Query Frame = 2
Query:    5 YLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTVGSHLMSALL*RVVLAIWTQSTIRRQQLTEKSDVYSFGVVLFEILCARPALNPTLPKEQVSLAEWAAHCHKKGILEQIMDPYLKGKIAPECFKKFAETAMKCVSDQGIERPSMGDVLWNLE 490
            YLH GA+ +IIHRD+K +NILLDE++ AKV+DFGL+K  P   +H+ + +     +           QLTEKSDVYSFGVVL E+L  R A+      + VS+A+WA    ++G    +++  +  K  PE  +K+   A+ C   Q   RP+M  V+  LE
Sbjct:  399 YLHYGAQPSIIHRDIKASNILLDERFEAKVADFGLAKFNPEGMTHMSTRVA--GTMGYVAPEYALYGQLTEKSDVYSFGVVLLELLSRRKAIVTDEEGQPVSVADWAWSLVREGQTLDVVEDGMPEKGPPEVLEKYVLIAVLCSHPQLHARPTMDQVVKMLE 558          
BLAST of CF504656 vs. ExPASy Swiss-Prot
Match: PAM74_ARATH (Probable LRR receptor-like serine/threonine-protein kinase PAM74 OS=Arabidopsis thaliana GN=PAM74 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 4.218e-23
Identity = 62/165 (37.58%), Postives = 91/165 (55.15%), Query Frame = 2
Query:    5 YLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTVGSHLMSALL*RVVLAIWTQSTIRRQQLTEKSDVYSFGVVLFEILCARPALNPTLPKEQVSLAEWAAHCHKKGILEQIMDPYLKGKIAPECFKKFAETAMKCVSDQGIERPSMGDVLWNLEFAL 499
            YLH+G    I+HRD+KTTNILLDE+  AK++DFGLS++ P  G   +S ++             +  +L EKSDVYSFG+VL EI+  +P ++ +  K  +S  +W      +G + +IMDP L G        +  E AM C +   + RP+M  V   L+  L
Sbjct:  691 YLHSGCTPPIVHRDIKTTNILLDEQLKAKLADFGLSRSFPIGGETHISTVV-AGTPGYLDPEYYQTTRLGEKSDVYSFGIVLLEIITNQPVIDQSRSKSHIS--QWVGFELTRGDITKIMDPNLNGDYESRSVWRVLELAMSCANPSSVNRPNMSQVANELKECL 852          
BLAST of CF504656 vs. ExPASy Swiss-Prot
Match: WAKLM_ARATH (Wall-associated receptor kinase-like 17 OS=Arabidopsis thaliana GN=WAKL17 PE=2 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 5.508e-23
Identity = 66/178 (37.08%), Postives = 96/178 (53.93%), Query Frame = 2
Query:    5 YLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTVGSHLMSALL*RVVLAIWTQSTIRRQQLTEKSDVYSFGVVLFEILCA-RPALNPTLPKEQVSLAEWAAHCHKKGILEQIMDPYLKGKIAPECFKKFAETAMKCVSDQGIERPSMGDVLWNLEFALQLQESAEESGKV 535
            YLH+ A   I HRD+K+TNILLDEK+ AKV+DFG S++     +H  + +     +        R  Q TEKSDVYSFGV+L E++   +P +     +E ++LAE      K+  L  IMD  ++    PE     A  AMKC+S +G  RP+M +V   LE      E ++   ++
Sbjct:  557 YLHSAASSPIYHRDIKSTNILLDEKYRAKVADFGTSRSVTIDQTHWTTVI--SGTVGYVDPEYYRSSQYTEKSDVYSFGVILAELITGDKPVIMVQNTQEIIALAEHFRVAMKERRLSDIMDARIRDDSKPEQVMAVANLAMKCLSSRGRNRPNMREVFTELERICTSPEDSQVQNRI 732          
BLAST of CF504656 vs. ExPASy Swiss-Prot
Match: Y1755_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07550 OS=Arabidopsis thaliana GN=At1g07550 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.227e-22
Identity = 66/177 (37.29%), Postives = 97/177 (54.80%), Query Frame = 2
Query:    5 YLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTVGSHLMSALL*RVVLAIWTQSTIRRQQLTEKSDVYSFGVVLFEILCARPALNPTLPKEQVSLAEWAAHCHKKGILEQIMDPYLKGKIAPECFKKFAETAMKCVSDQGIERPSMGDVLWNLEFALQLQESAEESGKV 535
            YLHTG K  I+HRDVK+TNILL E++ AK++DFGLS++   +G+     ++             +   L+ KSDVYSFGVVL EI+  +  ++  L +E  ++ EW +   + G +E I+DP L          K  E AM CV+    ERP+M  V+  L   L+  E   +S +V
Sbjct:  671 YLHTGCKPKIVHRDVKSTNILLSEEFEAKIADFGLSRSF-LIGNEAQPTVV-AGTFGYLDPEYHKTSLLSMKSDVYSFGVVLLEIISGQDVID--LSRENCNIVEWTSFILENGDIESIVDPNLHQDYDTSSAWKVVELAMSCVNRTSKERPNMSQVVHVLNECLETCEKWRKSQEV 843          
BLAST of CF504656 vs. ExPASy Swiss-Prot
Match: WAKLN_ARATH (Wall-associated receptor kinase-like 18 OS=Arabidopsis thaliana GN=WAKL18 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.603e-22
Identity = 65/178 (36.52%), Postives = 98/178 (55.06%), Query Frame = 2
Query:    5 YLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTVGSHLMSALL*RVVLAIWTQSTIRRQQLTEKSDVYSFGVVLFEILCA-RPALNPTLPKEQVSLAEWAAHCHKKGILEQIMDPYLKGKIAPECFKKFAETAMKCVSDQGIERPSMGDVLWNLEFALQLQESAEESGKV 535
            YLH+ A   I HRD+K+TNILLDEK+ AKV+DFG S++     +H  + +     +        +  Q TEKSDVYSFGV+L E++   +P +     +E V+LAE      K+  L  I+D  ++    PE     A+ AMKC+S +G +RP+M +V   LE      E ++   ++
Sbjct:  566 YLHSSASSPIYHRDIKSTNILLDEKYRAKVADFGTSRSVTIDQTHWTTVI--SGTVGYVDPEYYQSSQYTEKSDVYSFGVILAELITGDKPVIMVQNTQEIVALAEHFRVAMKEKRLTDIIDARIRNDCKPEQVMAVAKVAMKCLSSKGKKRPNMREVFTELERICTSPEDSQVHNRI 741          
BLAST of CF504656 vs. ExPASy Swiss-Prot
Match: Y5189_ARATH (Probable LRR receptor-like protein kinase At1g51890 OS=Arabidopsis thaliana GN=At1g51890 PE=2 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 2.093e-22
Identity = 65/169 (38.46%), Postives = 92/169 (54.44%), Query Frame = 2
Query:    5 YLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTVG-SHLMSALL*RVVLAIWTQSTIRRQQLTEKSDVYSFGVVLFEILCARPALNPTLPKEQVSLAEWAAHCHKKGILEQIMDPYLKGKIAPECFKKFAETAMKCVSDQGIERPSMGDVLWNLEFALQLQ 508
            YLH G +  ++HRDVK TNILL+E+  AK++DFGLS++ P  G SH+M+ +              R   L+EKSDVYSFGVVL EI+  +P +N    +E+  + EW       G ++ I+DP L          K  E A+ CV+     RP+M  V+  L   L L+
Sbjct:  681 YLHNGCRPPMVHRDVKPTNILLNERSQAKLADFGLSRSFPVDGESHVMTVV--AGTPGYLDPEYYRTNWLSEKSDVYSFGVVLLEIVTNQPVMNKN--RERPHINEWVMFMLTNGDIKSIVDPKLNEDYDTNGVWKVVELALACVNPSSSRRPTMPHVVMELNECLALE 845          
BLAST of CF504656 vs. ExPASy Swiss-Prot
Match: Y5182_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51820 OS=Arabidopsis thaliana GN=At1g51820 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.039e-21
Identity = 65/185 (35.14%), Postives = 96/185 (51.89%), Query Frame = 2
Query:    5 YLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTVGSHLMSALL*RVVLAIWTQSTIRRQQLTEKSDVYSFGVVLFEILCARPALNPTLPKEQVSLAEWAAHCHKKGILEQIMDPYLKGKIAPECFKKFAETAMKCVSDQGIERPSMGDVLWNLEFALQLQESAEESGKVLGGGMDIE 559
            YLH G K  ++HRDVKTTNILL+E + AK++DFGLS++    G   +S ++             R   LTEKSDVYSFG++L EI+  R  ++ +  +E+  + EW      KG ++ IMDP L          K  E AM C++     RP+M  V+  L   L  + +   + + +     IE
Sbjct:  690 YLHNGCKPPMVHRDVKTTNILLNEHFEAKLADFGLSRSFLIEGETHVSTVV-AGTPGYLDPEYHRTNWLTEKSDVYSFGILLLEIITNRHVIDQS--REKPHIGEWVGVMLTKGDIQSIMDPSLNEDYDSGSVWKAVELAMSCLNHSSARRPTMSQVVIELNECLASENARGGASRDMESKSSIE 871          
BLAST of CF504656 vs. ExPASy Swiss-Prot
Match: Y1154_ARATH (Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana GN=At1g01540 PE=1 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 3.947e-21
Identity = 52/162 (32.10%), Postives = 90/162 (55.56%), Query Frame = 2
Query:    5 YLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTVGSHLMSALL*RVVLAIWTQSTIRRQQLTEKSDVYSFGVVLFEILCARPALNPTLPKEQVSLAEWAAHCHKKGILEQIMDPYLKGKIAPECFKKFAETAMKCVSDQGIERPSMGDVLWNLE 490
            YLH G +  ++HRD+K++NILLD +W AKVSDFGL+K   +  S++ + ++                 L EKSD+YSFG+++ EI+  R  ++ + P+ + +L +W          E+++DP +    + +  K+    A++CV     +RP MG ++  LE
Sbjct:  267 YLHEGLEPKVVHRDIKSSNILLDRQWNAKVSDFGLAKLLGSESSYVTTRVM--GTFGYVAPEYACTGMLNEKSDIYSFGILIMEIITGRNPVDYSRPQGETNLVDWLKSMVGNRRSEEVVDPKIPEPPSSKALKRVLLVALRCVDPDANKRPKMGHIIHMLE 426          
BLAST of CF504656 vs. ExPASy Swiss-Prot
Match: WAKLQ_ARATH (Wall-associated receptor kinase-like 20 OS=Arabidopsis thaliana GN=WAKL20 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 3.947e-21
Identity = 65/175 (37.14%), Postives = 98/175 (56.00%), Query Frame = 2
Query:    5 YLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTV-----GSHLMSALL*RVVLAIWTQSTIRRQQLTEKSDVYSFGVVLFEILCARPALNPTLPKEQVSLAEWAAHCHKKGILEQIMDPYLK---GKIAPECFKKFAETAMKCVSDQGIERPSMGDVLWNLEFALQL 505
            YLH+ A+  I HRDVK++NILLDEK  AKVSDFGLS+           SH+ +    +  L        R  QLT+KSDVYSFGVVL E++ ++ A++ T  +E V+L  +      +  L + +DP LK    KI  +  ++    A  C++++   RPSM +V   +E+ + +
Sbjct:  477 YLHSAAQPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVDLTETANNESHIFTGA--QGTLGYLDPEYYRNFQLTDKSDVYSFGVVLLEMVTSKKAIDFTREEEDVNLVMYINKMMDQERLTECIDPLLKKTANKIDMQTIQQLGNLASACLNERRQNRPSMKEVADEIEYIINI 649          
The following BLAST results are available for this feature:
BLAST of CF504656 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 182
Match NameE-valueIdentityDescription
Y2899_ARATH3.229e-2337.84Probable leucine-rich repeat receptor-like protein... [more]
RKF3_ARATH3.229e-2340.12Probable LRR receptor-like serine/threonine-protei... [more]
PAM74_ARATH4.218e-2337.58Probable LRR receptor-like serine/threonine-protei... [more]
WAKLM_ARATH5.508e-2337.08Wall-associated receptor kinase-like 17 OS=Arabido... [more]
Y1755_ARATH1.227e-2237.29Probable LRR receptor-like serine/threonine-protei... [more]
WAKLN_ARATH1.603e-2236.52Wall-associated receptor kinase-like 18 OS=Arabido... [more]
Y5189_ARATH2.093e-2238.46Probable LRR receptor-like protein kinase At1g5189... [more]
Y5182_ARATH1.039e-2135.14Probable LRR receptor-like serine/threonine-protei... [more]
Y1154_ARATH3.947e-2132.10Probable serine/threonine-protein kinase At1g01540... [more]
WAKLQ_ARATH3.947e-2137.14Wall-associated receptor kinase-like 20 OS=Arabido... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-145 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-1_G12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504656 ID=CF504656; Name=CF504656; organism=Citrus sinensis; type=EST; length=601bp
ACACTATCTCCACACTGGTGCCAAACACACGATTATCCACAGAGATGTTA
AGACTACCAATATTCTTTTGGACGAGAAGTGGGTGGCAAAGGTTTCTGAT
TTTGGTTTGTCAAAAACAGGTCCCACCGTTGGATCACACCTCATGTCAGC
ACTGTTGTGAAGGGTAGTTTTGGCTATTTGGACCCAGAGTACTATCAGGC
GTCAGCAACTAACAGAGAAGTCTGATGTTTATTCTTTTGGTGTCGTGCTC
TTCGAAATCCTGTGTGCTCGACCAGCCTTAAACCCAACTTTGCCCAAGGA
GCAAGTGAGCTTGGCTGAGTGGGCTGCTCATTGTCACAAGAAAGGAATAC
TCGAACAGATTATGGACCCTTATCTCAAGGGAAAGATTGCACCTGAATGC
TTCAAAAAGTTTGCCGAGACAGCAATGAAGTGTGTATCTGATCAAGGTAT
TGAGAGGCCATCAATGGGCGATGTGCTGTGGAACCTAGAGTTCGCTTTGC
AGCTACAAGAGAGTGCAGAGGAAAGCGGCAAAGTTCTTGGCGGAGGAATG
GACATTGAGGAAGGAGCATTTGATGTCGACTGTAAAGGTAAGAAAGATCC
C
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