CF504656

Overview
NameCF504656
Unique NameCF504656
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length601
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13353 contig Csv1_Contig13353:842..1439. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF504656 vs. ExPASy Swiss-Prot
Match: WAKLH_ARATH (Wall-associated receptor kinase-like 9 OS=Arabidopsis thaliana GN=WAKL9 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 5.156e-21
Identity = 65/180 (36.11%), Postives = 97/180 (53.89%), Query Frame = 2
Query:    5 YLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTVGSHLMSALL*RVVLAIWTQSTIRRQQLTEKSDVYSFGVVLFEILCARPALNPTLPKEQVSLAEWAAHCHKKGILEQIMDPYLKGKIAPECFKKFAETAMKCVSDQGIERPSMGDVLWNLEFA------LQLQESAEES 526
            YLH+ A   I HRDVK+TNI+LDEK+ AKVSDFG S+T     +HL + +     +        +  Q T+KSDVYSFGVVL E++    +++    +E  +LA +     K+  L  I+D  ++           A+ A KC++ +G +RPSM +V   L+        +QLQE   E+
Sbjct:  560 YLHSSASSPIYHRDVKSTNIMLDEKYRAKVSDFGTSRTVTVDHTHLTTVV--SGTVGYMDPEYFQSSQFTDKSDVYSFGVVLVELITGEKSISFLRSQENRTLATYFILAMKENKLFDIIDARIRDGCMLSQVTATAKVARKCLNLKGRKRPSMREVSMELDSIRMPCGDMQLQECVSEN 737          
BLAST of CF504656 vs. ExPASy Swiss-Prot
Match: SIRK_ARATH (Senescence-induced receptor-like serine/threonine-protein kinase OS=Arabidopsis thaliana GN=SIRK PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 8.794e-21
Identity = 65/189 (34.39%), Postives = 102/189 (53.97%), Query Frame = 2
Query:    5 YLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTVGSHLMSALL*RVVLAIWTQSTIRRQQLTEKSDVYSFGVVLFEILCARPALNPTLPKEQVSLAEWAAHCHKKGILEQIMDPYLKGKIAPECFKKFAETAMKCVSDQGIERPSMGDVLWNLE----FALQLQESAEESGKVLGGGMDIE 559
            YLH G K  I+HRDVK TNILL+EK  AK++DFGLS++    GS  +S ++    +          +Q+ EKSDVYS GVVL E++  +PA+  +   E+V +++        G +  I+D  L+ +       K +E A+ C      +RP+M  V+  L+      +  QE+ ++S K+L   +D E
Sbjct:  684 YLHNGCKPPIVHRDVKPTNILLNEKLQAKMADFGLSRSFSVEGSGQISTVV-AGSIGYLDPEYYSTRQMNEKSDVYSLGVVLLEVITGQPAI-ASSKTEKVHISDHVRSILANGDIRGIVDQRLRERYDVGSAWKMSEIALACTEHTSAQRPTMSQVVMELKQIVYGIVTDQENYDDSTKMLTVNLDTE 870          
BLAST of CF504656 vs. ExPASy Swiss-Prot
Match: Y2706_ARATH (Probable receptor-like protein kinase At2g47060 OS=Arabidopsis thaliana GN=At2g47060 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.149e-20
Identity = 67/177 (37.85%), Postives = 90/177 (50.85%), Query Frame = 2
Query:    5 YLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTVGSHLMSALL*RVV--LAIWTQSTIRRQQLTEKSDVYSFGVVLFEILCARPALNPTLPKEQVSLAEWAAHCHKKGILEQIMDPYLKGKIAPECFKKFAETAMKCVSDQGIERPSMGDVLWNLEFALQLQESAEESG 529
            YLH  A   IIHRD+K++N+LL E  VAK++DF LS   P + + L S    RV+              QL  KSDVYSFGVVL E+L  R  ++  LP+ Q SL  WA     +  ++Q +D  L G   P+   K A  A  CV  +   RP+M  V+  L+  L  +  A   G
Sbjct:  190 YLHEKANPHIIHRDIKSSNVLLFEDDVAKIADFDLSNQAPDMAARLHST---RVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHRLPRGQQSLVTWATPKLSEDKVKQCVDARLGGDYPPKAVAKLAAVAALCVQYEADFRPNMSIVVKALQPLLNARAVAPGEG 363          
BLAST of CF504656 vs. ExPASy Swiss-Prot
Match: Y2197_ARATH (Probable protein kinase At2g41970 OS=Arabidopsis thaliana GN=At2g41970 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.149e-20
Identity = 62/176 (35.23%), Postives = 93/176 (52.84%), Query Frame = 2
Query:    5 YLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTVGSHLMSALL*RVV--LAIWTQSTIRRQQLTEKSDVYSFGVVLFEILCARPALNPTLPKEQVSLAEWAAHCHKKGILEQIMDPYLKGKIAPECFKKFAETAMKCVSDQGIERPSMGDVLWNLEFALQLQESAEES 526
            +LH   +  I+HRDV+++N+LL + +VAK++DF L+       + L S    RV+              Q+T+KSDVYSFGVVL E+L  R  ++ T+PK Q SL  WA     +  ++Q +DP L     P+   K A  A  CV  +   RP+M  V+  L+  L  + +  ES
Sbjct:  191 FLHEKVQPPIVHRDVRSSNVLLFDDFVAKMADFNLTNASSDTAARLHST---RVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCIDPKLNNDFPPKAVAKLAAVAALCVQYEADFRPNMTIVVKALQPLLNSKPAGPES 363          
BLAST of CF504656 vs. ExPASy Swiss-Prot
Match: WAKLK_ARATH (Putative wall-associated receptor kinase-like 11 OS=Arabidopsis thaliana GN=WAKL11 PE=3 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 1.149e-20
Identity = 67/188 (35.64%), Postives = 98/188 (52.13%), Query Frame = 2
Query:    5 YLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTVGSHLMSALL*RVVLAIWTQSTIRRQQLTEKSDVYSFGVVLFEILCA-RPALNPTLPKEQVSLAEWAAHCHKKGILEQIMDPYLKGKIAPECFKKFAETAMKCVSDQGIERPSMGDVLWNLEFALQLQESAEESGKVLGGGMDIEEG 565
            YLH+ A   I HRD+K+TNILLDEK+  KVSDFG S++     +H  + +     +           Q T+KSDVYSFGVVL E++   +P +  +  +E   LA+      K+    +IMD  ++    PE     A  A +C++ +G +RP M  V  +LE  L  QE +  + +   G  D EEG
Sbjct:  563 YLHSAASSPIYHRDIKSTNILLDEKYRTKVSDFGTSRSVTIDHTHWTTVI--SGTVGYVDPEYYGSSQYTDKSDVYSFGVVLVELITGEKPVITVSNSQEIRGLADHFRVAMKENRFFEIMDARIRDGCKPEQVMAVANLARRCLNSKGKKRPCMRKVFTDLEKILASQEDSLVNIENDDGADDEEEG 748          
BLAST of CF504656 vs. ExPASy Swiss-Prot
Match: ACCR3_ARATH (Putative serine/threonine-protein kinase-like protein CCR3 OS=Arabidopsis thaliana GN=CCR3 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.149e-20
Identity = 72/181 (39.78%), Postives = 96/181 (53.04%), Query Frame = 2
Query:    5 YLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTVGSHLMSALL*RVVLAIWTQSTIRRQQ-----LTEKSDVYSFGVVLFEILCARPAL---NPTLPKEQ----VSLAEWAAHCHKKGILEQIMDPYLKGKIAPE--CFKKFAETAMKCVSDQGIERPSMGDVLWNLEFALQL 505
            YLH  A   IIHRD+K++NILLD  WVA+VSDFGLS  GP +G         R   A  T   I  +      LT+KSDVY  GVVL E+L  + A+   N  + +E+    V L +++        L  I+DP +      E    +  A TAM CV+ +G  RP+M D++ NLE AL L
Sbjct:  618 YLHNYAVPPIIHRDIKSSNILLDSNWVARVSDFGLSLMGPVLGKDHNPYQ--RPTKAAGTVGYIDPEYYSLNVLTDKSDVYGLGVVLLELLTGKRAIFRNNGDVEEEEGCVPVHLVDYSVPAITADELSTILDPRVGSPELGEGDAVELVAYTAMHCVNAEGRNRPTMTDIVGNLERALDL 796          
BLAST of CF504656 vs. ExPASy Swiss-Prot
Match: PTI1_SOLLC (Pto-interacting protein 1 OS=Solanum lycopersicum GN=PTI1 PE=1 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 1.500e-20
Identity = 64/164 (39.02%), Postives = 88/164 (53.66%), Query Frame = 2
Query:    5 YLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTVGSHLMSALL*RVV--LAIWTQSTIRRQQLTEKSDVYSFGVVLFEILCARPALNPTLPKEQVSLAEWAAHCHKKGILEQIMDPYLKGKIAPECFKKFAETAMKCVSDQGIERPSMGDVLWNLE 490
            YLH  A+  IIHRD+K++NILL +  VAK++DF LS   P + + L S    RV+              QL+ KSDVYSFGVVL E+L  R  ++ TLP+ Q SL  WA     +  ++Q +D  L     P+   K A  A  CV  +   RP+M  V+  L+
Sbjct:  185 YLHEKAQPHIIHRDIKSSNILLFDDDVAKIADFDLSNQAPDMAARLHST---RVLGTFGYHAPEYAMTGQLSSKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPRLSEDKVKQCVDARLNTDYPPKAIAKMAAVAALCVQYEADFRPNMSIVVKALQ 345          
BLAST of CF504656 vs. ExPASy Swiss-Prot
Match: RLK7_ARATH (Receptor-like protein kinase At5g59670 OS=Arabidopsis thaliana GN=At5g59670 PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.959e-20
Identity = 60/178 (33.71%), Postives = 89/178 (50.00%), Query Frame = 2
Query:    5 YLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTVGSHLMSALL*RVVLAIWTQSTIRRQQLTEKSDVYSFGVVLFEILCARPALNPTLPKEQVSLAEWAAHCHKKGILEQIMDPYLKGKIAPECFKKFAETAMKCVSDQGIERPSMGDVLWNLEFALQLQESAEESGKVL 538
            YLH G    ++HRDVKT NILLDE + AK++DFGLS++    G    S  +    L           +L EKSDVYSFG+VL E++  +P +N T     ++  +W      +G + +IMDP L+         +  E AM C      +RPSM  V+  L+  +  + +     + L
Sbjct:  676 YLHIGCTPPMVHRDVKTANILLDENFKAKLADFGLSRSFQGEGESQESTTI-AGTLGYLDPECYHSGRLGEKSDVYSFGIVLLEMITNQPVINQTSGDSHIT--QWVGFQMNRGDILEIMDPNLRKDYNINSAWRALELAMSCAYPSSSKRPSMSQVIHELKECIACENTGISKNRSL 850          
BLAST of CF504656 vs. ExPASy Swiss-Prot
Match: WAKLE_ARATH (Wall-associated receptor kinase-like 5 OS=Arabidopsis thaliana GN=WAKL5 PE=2 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 3.342e-20
Identity = 61/162 (37.65%), Postives = 87/162 (53.70%), Query Frame = 2
Query:    5 YLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTVGSHLMSALL*RVVLAIWTQSTIRRQQLTEKSDVYSFGVVLFEILCARPALNPTLPKEQVSLAEWAAHCHKKGILEQIMDPYLKGKIAPECFKKFAETAMKCVSDQGIERPSMGDVLWNLE 490
            Y+H+ A   I HRD+KTTNILLDEK+ AKVSDFG S++     +HL + +                 Q T+KSDVYSFGVVL E++     L+    +E   LA       K+  +  I+D  +K +   +     A+ A KC+S +GI+RP+M +    LE
Sbjct:  544 YMHSAASFPIYHRDIKTTNILLDEKYGAKVSDFGTSRSVTIDQTHLTTMV--AGTFGYMDPEYFLSSQYTDKSDVYSFGVVLVELITGEKPLSRIRSEEGRGLATHFLEAMKENRVIDIIDIRIKEESKLDQLMAVAKLARKCLSRKGIKRPNMREASLELE 703          
BLAST of CF504656 vs. ExPASy Swiss-Prot
Match: Y5596_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g59680 OS=Arabidopsis thaliana GN=At5g59680 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 4.364e-20
Identity = 63/183 (34.43%), Postives = 93/183 (50.82%), Query Frame = 2
Query:    5 YLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTVGSHLMSALL*RVVLAIWTQSTIRRQQLTEKSDVYSFGVVLFEILCARPALNPTLPKEQVSLAEWAAHCHKKGILEQIMDPYLKGKIAPECFKKFAETAMKCVSDQGIERPSMGDVLWNLEFALQLQESAEESGKVLGGGMD 553
            YLH G    ++HRDVKTTNILLDE + AK++DFGLS++ P  G   +S ++                +L+EKSDVYSFG+VL E++  +  ++    K  ++  +W       G + +IMD  L G        +  E AM C       RP+M  V+  L+  L     +E S + +  GMD
Sbjct:  692 YLHIGCTPPMVHRDVKTTNILLDEHYKAKLADFGLSRSFPVGGESHVSTVI-AGTPGYLDPEYYHTSRLSEKSDVYSFGIVLLEMITNQAVIDRNRRKSHIT--QWVGSELNGGDIAKIMDLKLNGDYDSRSAWRALELAMSCADPTSARRPTMSHVVIELKECL----VSENSRRNMSRGMD 867          
The following BLAST results are available for this feature:
BLAST of CF504656 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 182
Match NameE-valueIdentityDescription
WAKLH_ARATH5.156e-2136.11Wall-associated receptor kinase-like 9 OS=Arabidop... [more]
SIRK_ARATH8.794e-2134.39Senescence-induced receptor-like serine/threonine-... [more]
Y2706_ARATH1.149e-2037.85Probable receptor-like protein kinase At2g47060 OS... [more]
Y2197_ARATH1.149e-2035.23Probable protein kinase At2g41970 OS=Arabidopsis t... [more]
WAKLK_ARATH1.149e-2035.64Putative wall-associated receptor kinase-like 11 O... [more]
ACCR3_ARATH1.149e-2039.78Putative serine/threonine-protein kinase-like prot... [more]
PTI1_SOLLC1.500e-2039.02Pto-interacting protein 1 OS=Solanum lycopersicum ... [more]
RLK7_ARATH1.959e-2033.71Receptor-like protein kinase At5g59670 OS=Arabidop... [more]
WAKLE_ARATH3.342e-2037.65Wall-associated receptor kinase-like 5 OS=Arabidop... [more]
Y5596_ARATH4.364e-2034.43Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-145 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-1_G12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504656 ID=CF504656; Name=CF504656; organism=Citrus sinensis; type=EST; length=601bp
ACACTATCTCCACACTGGTGCCAAACACACGATTATCCACAGAGATGTTA
AGACTACCAATATTCTTTTGGACGAGAAGTGGGTGGCAAAGGTTTCTGAT
TTTGGTTTGTCAAAAACAGGTCCCACCGTTGGATCACACCTCATGTCAGC
ACTGTTGTGAAGGGTAGTTTTGGCTATTTGGACCCAGAGTACTATCAGGC
GTCAGCAACTAACAGAGAAGTCTGATGTTTATTCTTTTGGTGTCGTGCTC
TTCGAAATCCTGTGTGCTCGACCAGCCTTAAACCCAACTTTGCCCAAGGA
GCAAGTGAGCTTGGCTGAGTGGGCTGCTCATTGTCACAAGAAAGGAATAC
TCGAACAGATTATGGACCCTTATCTCAAGGGAAAGATTGCACCTGAATGC
TTCAAAAAGTTTGCCGAGACAGCAATGAAGTGTGTATCTGATCAAGGTAT
TGAGAGGCCATCAATGGGCGATGTGCTGTGGAACCTAGAGTTCGCTTTGC
AGCTACAAGAGAGTGCAGAGGAAAGCGGCAAAGTTCTTGGCGGAGGAATG
GACATTGAGGAAGGAGCATTTGATGTCGACTGTAAAGGTAAGAAAGATCC
C
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