CF504656

Overview
NameCF504656
Unique NameCF504656
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length601
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13353 contig Csv1_Contig13353:842..1439. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF504656 vs. ExPASy Swiss-Prot
Match: Y5169_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g16900 OS=Arabidopsis thaliana GN=At5g16900 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 4.364e-20
Identity = 64/177 (36.16%), Postives = 96/177 (54.24%), Query Frame = 2
Query:    5 YLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTVG--SHLMSALL*RVVLAIWTQSTIRRQQLTEKSDVYSFGVVLFEILCARPALNPTLPKEQVSLAEWAAHCHKKGILEQIMDPYLKGKIAPECFKKFAETAMKCVSDQGIERPSMGDVLWNLEFALQLQESAEESG 529
            YLH+G K  ++HRDVK+ NILLDE + AK++DFGLS++  +VG  SH+ + ++             R  +LTEKSDVYSFG+VL EI+  +P L      E   +AE       +  +  I+DP L G+      +K  + AM CV    + RP M  V+  L+  ++ +     +G
Sbjct:  685 YLHSGCKPLMVHRDVKSMNILLDEHFQAKLADFGLSRSF-SVGEESHVSTGVV--GTPGYLDPEYYRTYRLTEKSDVYSFGIVLLEIITNQPVLEQA--NENRHIAERVRTMLTRSDISTIVDPNLIGEYDSGSVRKALKLAMSCVDPSPVARPDMSHVVQELKQCIKSENLRLRTG 856          
BLAST of CF504656 vs. ExPASy Swiss-Prot
Match: WAKLI_ARATH (Wall-associated receptor kinase-like 22 OS=Arabidopsis thaliana GN=WAKL22 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 4.364e-20
Identity = 66/181 (36.46%), Postives = 92/181 (50.83%), Query Frame = 2
Query:    5 YLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTVGSHLMSALL*RVVLAIWTQSTIRRQQLTEKSDVYSFGVVLFEILCARPALNPTLPKEQVSLAEWAAHCHKKGILEQIMDPYLKGKIAPECFKKFAETAMKCVSDQGIERPSMGDVLWNLE--------FALQLQESAEE 523
            YLH+ A   + HRDVKTTNILLDEK+ AKVSDFG S++     +HL +  L             +  Q T+KSDVYSFGVVL E++      +   P+E   L        K+  +  I+D  +K     E     A+ A +C+S +G +RP+M +V   LE          L ++E  EE
Sbjct:  533 YLHSAASTPVYHRDVKTTNILLDEKYRAKVSDFGTSRSINVDQTHLTT--LVAGTFGYLDPEYFQTSQFTDKSDVYSFGVVLVELITGEKPFSVMRPEENRGLVSHFNEAMKQNRVLDIVDSRIKEGCTLEQVLAVAKLARRCLSLKGKKRPNMREVSVELERIRSSPEDLELHIEEEDEE 711          
BLAST of CF504656 vs. ExPASy Swiss-Prot
Match: WAKLJ_ARATH (Wall-associated receptor kinase-like 10 OS=Arabidopsis thaliana GN=WAKL10 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 5.700e-20
Identity = 60/162 (37.04%), Postives = 88/162 (54.32%), Query Frame = 2
Query:    5 YLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTVGSHLMSALL*RVVLAIWTQSTIRRQQLTEKSDVYSFGVVLFEILCARPALNPTLPKEQVSLAEWAAHCHKKGILEQIMDPYLKGKIAPECFKKFAETAMKCVSDQGIERPSMGDVLWNLE 490
            YLH+ A   I HRD+K+TNI+LDEK  AKVSDFG S+T     +HL + +     +        +  Q T+KSDVYSFGVVL E++    +++    +E  +LA +     K+  L  I+D  ++           A+ A KC++ +G +RPSM  V   LE
Sbjct:  546 YLHSAASSPIYHRDIKSTNIMLDEKHRAKVSDFGTSRTVTVDHTHLTTVV--SGTVGYMDPEYFQSSQFTDKSDVYSFGVVLAELITGEKSVSFLRSQEYRTLATYFTLAMKENRLSDIIDARIRDGCKLNQVTAAAKIARKCLNMKGRKRPSMRQVSMELE 705          
BLAST of CF504656 vs. ExPASy Swiss-Prot
Match: WAKLR_ARATH (Wall-associated receptor kinase-like 21 OS=Arabidopsis thaliana GN=WAKL21 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 7.445e-20
Identity = 66/182 (36.26%), Postives = 101/182 (55.49%), Query Frame = 2
Query:    5 YLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTV---GSHLMSALL*RVVLAIWTQSTIRRQQLTEKSDVYSFGVVLFEILCARPALNPTLPKEQVSLAEWAAHCHKKGILEQIMDPYLKGKIAPECF---KKFAETAMKCVSDQGIERPSMGDVLWNLEFALQLQESAEESGK 532
            +LH+     I HRD+K++NILLD ++ +K+SDFGLS+ G +     SH+ +A   +           +  QL++KSDVYSFGVVL EI+     ++ T P  +V+LA  A     +G +  I+DP L  +I P+ F      AE A +C+S     RP+M ++  +L   ++L     ESGK
Sbjct:  424 HLHSSVNPPIYHRDIKSSNILLDHEFNSKISDFGLSRLGMSTDFEASHISTAP--QGTPGYLDPQYHQDFQLSDKSDVYSFGVVLVEIISGFKVIDFTRPYSEVNLASLAVDRIGRGRVVDIIDPCLNKEINPKMFASIHNLAELAFRCLSFHRNMRPTMVEITEDLH-RIKLMHYGTESGK 602          
BLAST of CF504656 vs. ExPASy Swiss-Prot
Match: APK1B_ARATH (Protein kinase APK1B, chloroplastic OS=Arabidopsis thaliana GN=APK1B PE=2 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 7.445e-20
Identity = 65/172 (37.79%), Postives = 101/172 (58.72%), Query Frame = 2
Query:    5 YLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTVG-SHLMSALL*RVVLAIWTQSTIRRQQLTEKSDVYSFGVVLFEILCARPALNPTLPKEQVSLAEWAAH-CHKKGILEQIMDPYLKGKIAPECFKKFAETAMKCVSDQGIERPSMGDVLWNLEFALQLQES 514
            +LH  A+ ++I+RD KT+NILLD ++ AK+SDFGL+K GPT   SH+ + ++     A      +    LT KSDVYS+GVVL E+L  R A++   P  +  L EWA      K  L +++D  L+ + + E   K A  A++C++ +   RP+M +V+ +LE    L E+
Sbjct:  192 FLHN-AETSVIYRDFKTSNILLDSEYNAKLSDFGLAKDGPTGDKSHVSTRIMGTYGYA--APEYLATGHLTTKSDVYSYGVVLLEVLSGRRAVDKNRPPGEQKLVEWARPLLANKRKLFRVIDNRLQDQYSMEEACKVATLALRCLTFEIKLRPNMNEVVSHLEHIQTLNEA 360          
BLAST of CF504656 vs. ExPASy Swiss-Prot
Match: Y5614_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana GN=At1g56140 PE=1 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 9.723e-20
Identity = 62/175 (35.43%), Postives = 91/175 (52.00%), Query Frame = 2
Query:    5 YLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTVGSHLMSALL*RVVLAIWTQSTIRRQQLTEKSDVYSFGVVLFEILCARPALNPTLPKEQVSLAEWAAHCHKKGILEQIMDPYLKGKIAPECFKKFAETAMKCVSDQGIERPSMGDVLWNLEFALQLQESAEESG 529
            YLH  A+  I+HRDVK +NILLD K V KVSDFGL+K      +H+ + +     +         R  LTEK+DVY+FGVV  E++  RP  +  L  E+  L EWA + H+KG   +++D  L  +   E  K+    A+ C       RP M  V+  L   +++ +   + G
Sbjct:  804 YLHEEARLRIVHRDVKASNILLDSKLVPKVSDFGLAKLYDDKKTHISTRV--AGTIGYLAPEYAMRGHLTEKTDVYAFGVVALELVSGRPNSDENLEDEKRYLLEWAWNLHEKGREVELIDHQLT-EFNMEEGKRMIGIALLCTQTSHALRPPMSRVVAMLSGDVEVSDVTSKPG 975          
BLAST of CF504656 vs. ExPASy Swiss-Prot
Match: PBS1_ARATH (Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.270e-19
Identity = 58/165 (35.15%), Postives = 88/165 (53.33%), Query Frame = 2
Query:    5 YLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTVG-SHLMSALL*RVVLAIWTQSTIRRQQLTEKSDVYSFGVVLFEILCARPALNPTLPKEQVSLAEWAAHC-HKKGILEQIMDPYLKGKIAPECFKKFAETAMKCVSDQGIERPSMGDVLWNLEF 493
            +LH  A   +I+RD K++NILLDE +  K+SDFGL+K GPT   SH+ + ++                QLT KSDVYSFGVV  E++  R A++  +P  + +L  WA    + +    ++ DP LKG+       +    A  C+ +Q   RP + DV+  L +
Sbjct:  200 FLHDKANPPVIYRDFKSSNILLDEGFHPKLSDFGLAKLGPTGDKSHVSTRVM--GTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSEMPHGEQNLVAWARPLFNDRRKFIKLADPRLKGRFPTRALYQALAVASMCIQEQAATRPLIADVVTALSY 362          
BLAST of CF504656 vs. ExPASy Swiss-Prot
Match: WAKLA_ARATH (Wall-associated receptor kinase-like 1 OS=Arabidopsis thaliana GN=WAKL1 PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.658e-19
Identity = 62/162 (38.27%), Postives = 85/162 (52.47%), Query Frame = 2
Query:    5 YLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTVGSHLMSALL*RVVLAIWTQSTIRRQQLTEKSDVYSFGVVLFEILCARPALNPTLPKEQVSLAEWAAHCHKKGILEQIMDPYLKGKIAPECFKKFAETAMKCVSDQGIERPSMGDVLWNLE 490
            Y+H+ A   I HRD+KTTNILLDEK+ AKVSDFG S++     +HL +  L                Q T KSDVYSFGVVL E++     L+    +E   LA       K+  +  I+D  +K +   E     A+ A KC++ +G  RP+M +V   LE
Sbjct:  541 YMHSAASFPIFHRDIKTTNILLDEKYRAKVSDFGTSRSVTLDQTHLTT--LVAGTFGYMDPEYFLSSQYTHKSDVYSFGVVLVELITGEKPLSRVRSEEGRGLATHFLEAMKENRVIDIIDIRIKDESKLEQVMAVAKLARKCLNRKGKNRPNMKEVSNELE 700          
BLAST of CF504656 vs. ExPASy Swiss-Prot
Match: NAK_ARATH (Probable serine/threonine-protein kinase NAK OS=Arabidopsis thaliana GN=NAK PE=2 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 1.658e-19
Identity = 63/175 (36.00%), Postives = 100/175 (57.14%), Query Frame = 2
Query:    5 YLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPT-VGSHLMSALL*RVVLAIWTQSTIRRQQLTEKSDVYSFGVVLFEILCARPALNPTLPKEQVSLAEWA-AHCHKKGILEQIMDPYLKGKIAPECFKKFAETAMKCVSDQGIERPSMGDVLWNLEFALQLQESAEE 523
            +LH  A+  +I+RD K +NILLD  + AK+SDFGL++ GP    SH+ + ++     A      +    L+ KSDVYSFGVVL E+L  R A++   P  + +L +WA  +   K  L ++MDP L+G+ +     K A  A+ C+S     RP+M +++  +E  L +Q+ A +
Sbjct:  191 FLHN-AQPQVIYRDFKASNILLDSNYNAKLSDFGLARDGPMGDNSHVSTRVMGTQGYA--APEYLATGHLSVKSDVYSFGVVLLELLSGRRAIDKNQPVGEHNLVDWARPYLTNKRRLLRVMDPRLQGQYSLTRALKIAVLALDCISIDAKSRPTMNEIVKTME-ELHIQKEASK 361          
BLAST of CF504656 vs. ExPASy Swiss-Prot
Match: WAKLC_ARATH (Wall-associated receptor kinase-like 3 OS=Arabidopsis thaliana GN=WAKL3 PE=2 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 2.166e-19
Identity = 59/162 (36.42%), Postives = 88/162 (54.32%), Query Frame = 2
Query:    5 YLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTVGSHLMSALL*RVVLAIWTQSTIRRQQLTEKSDVYSFGVVLFEILCARPALNPTLPKEQVSLAEWAAHCHKKGILEQIMDPYLKGKIAPECFKKFAETAMKCVSDQGIERPSMGDVLWNLE 490
            Y+H+ A   I HRD+KTTNILLDEK+ AK+SDFG S++  T  +HL +  L                Q T KSDVYSFGVVL E++     ++    +E + LA +     K+     I+D  +K +   +     A+ A +C++ +G +RP+M +V   LE
Sbjct:  540 YMHSAASFPIFHRDIKTTNILLDEKYRAKISDFGTSRSVATDQTHLTT--LVAGTFGYMDPEYFLSSQYTHKSDVYSFGVVLVELITGEKPMSRVRSEEGIGLATYFLEAMKENRAVDIIDIRIKDE--SKQVMAVAKLARRCLNRKGNKRPNMREVSIKLE 697          
The following BLAST results are available for this feature:
BLAST of CF504656 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 182
Match NameE-valueIdentityDescription
Y5169_ARATH4.364e-2036.16Probable LRR receptor-like serine/threonine-protei... [more]
WAKLI_ARATH4.364e-2036.46Wall-associated receptor kinase-like 22 OS=Arabido... [more]
WAKLJ_ARATH5.700e-2037.04Wall-associated receptor kinase-like 10 OS=Arabido... [more]
WAKLR_ARATH7.445e-2036.26Wall-associated receptor kinase-like 21 OS=Arabido... [more]
APK1B_ARATH7.445e-2037.79Protein kinase APK1B, chloroplastic OS=Arabidopsis... [more]
Y5614_ARATH9.723e-2035.43Probable LRR receptor-like serine/threonine-protei... [more]
PBS1_ARATH1.270e-1935.15Serine/threonine-protein kinase PBS1 OS=Arabidopsi... [more]
WAKLA_ARATH1.658e-1938.27Wall-associated receptor kinase-like 1 OS=Arabidop... [more]
NAK_ARATH1.658e-1936.00Probable serine/threonine-protein kinase NAK OS=Ar... [more]
WAKLC_ARATH2.166e-1936.42Wall-associated receptor kinase-like 3 OS=Arabidop... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-145 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-1_G12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504656 ID=CF504656; Name=CF504656; organism=Citrus sinensis; type=EST; length=601bp
ACACTATCTCCACACTGGTGCCAAACACACGATTATCCACAGAGATGTTA
AGACTACCAATATTCTTTTGGACGAGAAGTGGGTGGCAAAGGTTTCTGAT
TTTGGTTTGTCAAAAACAGGTCCCACCGTTGGATCACACCTCATGTCAGC
ACTGTTGTGAAGGGTAGTTTTGGCTATTTGGACCCAGAGTACTATCAGGC
GTCAGCAACTAACAGAGAAGTCTGATGTTTATTCTTTTGGTGTCGTGCTC
TTCGAAATCCTGTGTGCTCGACCAGCCTTAAACCCAACTTTGCCCAAGGA
GCAAGTGAGCTTGGCTGAGTGGGCTGCTCATTGTCACAAGAAAGGAATAC
TCGAACAGATTATGGACCCTTATCTCAAGGGAAAGATTGCACCTGAATGC
TTCAAAAAGTTTGCCGAGACAGCAATGAAGTGTGTATCTGATCAAGGTAT
TGAGAGGCCATCAATGGGCGATGTGCTGTGGAACCTAGAGTTCGCTTTGC
AGCTACAAGAGAGTGCAGAGGAAAGCGGCAAAGTTCTTGGCGGAGGAATG
GACATTGAGGAAGGAGCATTTGATGTCGACTGTAAAGGTAAGAAAGATCC
C
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