CF504656

Overview
NameCF504656
Unique NameCF504656
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length601
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13353 contig Csv1_Contig13353:842..1439. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF504656 vs. ExPASy Swiss-Prot
Match: WAK5_ARATH (Wall-associated receptor kinase 5 OS=Arabidopsis thaliana GN=WAK5 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.166e-19
Identity = 63/162 (38.89%), Postives = 82/162 (50.62%), Query Frame = 2
Query:    5 YLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTVGSHLMSALL*RVVLAIWTQSTIRRQQLTEKSDVYSFGVVLFEILCARPALNPTLPKEQVSLAEWAAHCHKKGILEQIMDPYLKGKIAPECFKKFAETAMKCVSDQGIERPSMGDVLWNLE 490
            YLH+ A   IIHRDVKT NILLDE   AKV+DFG S+  P     L + +  +  L            L EKSDVYSFGVVL E+L    AL    P+    L  +     K+  L +I+D  +  +      ++ A  A++C    G ERPSM +V   LE
Sbjct:  520 YLHSYASIPIIHRDVKTANILLDENLTAKVADFGASRLIPMDQEQLTTMV--QGTLGYLDPEYYNTGLLNEKSDVYSFGVVLMELLSGEKALCFERPQSSKHLVSYFVSAMKENRLHEIIDGQVMNEYNQREIQESARIAVECTRIMGEERPSMKEVAAELE 679          
BLAST of CF504656 vs. ExPASy Swiss-Prot
Match: WAK4_ARATH (Wall-associated receptor kinase 4 OS=Arabidopsis thaliana GN=WAK4 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.166e-19
Identity = 63/162 (38.89%), Postives = 83/162 (51.23%), Query Frame = 2
Query:    5 YLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTVGSHLMSALL*RVVLAIWTQSTIRRQQLTEKSDVYSFGVVLFEILCARPALNPTLPKEQVSLAEWAAHCHKKGILEQIMDPYLKGKIAPECFKKFAETAMKCVSDQGIERPSMGDVLWNLE 490
            YLH+ A   IIHRD+KT NILLDE   AKV+DFG S+  P     L  A + +  L            L EKSDVYSFGVVL E+L  + AL    P+    +  + A   K+  L +I+D  +  +      +K A  A++C    G ERP M +V   LE
Sbjct:  522 YLHSSASIPIIHRDIKTANILLDENLTAKVADFGASRLIPMDKEDL--ATMVQGTLGYLDPEYYNTGLLNEKSDVYSFGVVLMELLSGQKALCFERPQTSKHIVSYFASATKENRLHEIIDGQVMNENNQREIQKAARIAVECTRLTGEERPGMKEVAAELE 681          
BLAST of CF504656 vs. ExPASy Swiss-Prot
Match: Y2296_ARATH (Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana GN=At2g42960 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 2.829e-19
Identity = 56/186 (30.11%), Postives = 94/186 (50.54%), Query Frame = 2
Query:    5 YLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTVGSHLMSALL*RVVLAIWTQSTIRRQQLTEKSDVYSFGVVLFEILCARPALNPTLPKEQVSLAEWAAHCHKKGILEQIMDPYLKGKIAPECFKKFAETAMKCVSDQGIERPSMGDVLWNLEFALQLQESAEESGKVLGGGMDIEE 562
            YLH   +  ++HRD+K +NIL+D+++ AK+SDFGL+K   +  SH+ + ++                 L EKSD+YSFGV+L E +  R  ++   P  +V+L EW          E+++DP L+ + +    K+    +++CV  +  +RP M  V   LE           + +    GM+I E
Sbjct:  296 YLHEAIEPKVVHRDIKASNILIDDEFNAKLSDFGLAKLLDSGESHITTRVM--GTFGYVAPEYANTGLLNEKSDIYSFGVLLLEAITGRDPVDYGRPANEVNLVEWLKMMVGTRRAEEVVDPRLEPRPSKSALKRALLVSLRCVDPEAEKRPRMSQVARMLESDEHPFHKERRNKRSKTAGMEIVE 479          
BLAST of CF504656 vs. ExPASy Swiss-Prot
Match: Y5343_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana GN=At1g53430 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 3.695e-19
Identity = 56/168 (33.33%), Postives = 88/168 (52.38%), Query Frame = 2
Query:    5 YLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTVGSHLMSALL*RVVLAIWTQSTIRRQQLTEKSDVYSFGVVLFEILCARPALNPTLPKEQVSLAEWAAHCHKKGILEQIMDPYLKGKIAPECFKKFAETAMKCVSDQGIERPSMGDVLWNLEFALQLQ 508
            YLH  ++  I+HRD+K TN+LLD    AK+SDFGL+K      +H+ + +     +         R  LT+K+DVYSFGVV  EI+  +   N    +E V L +WA    ++G L +++DP L    + +   +    A+ C +     RP M  V+  LE  +++Q
Sbjct:  782 YLHEESRLKIVHRDIKATNVLLDLSLNAKISDFGLAKLNDDENTHISTRIA--GTIGYMAPEYAMRGYLTDKADVYSFGVVCLEIVSGKSNTNYRPKEEFVYLLDWAYVLQEQGSLLELVDPDLGTSFSKKEAMRMLNIALLCTNPSPTLRPPMSSVVSMLEGKIKVQ 947          
BLAST of CF504656 vs. ExPASy Swiss-Prot
Match: WAKLS_ARATH (Putative wall-associated receptor kinase-like 16 OS=Arabidopsis thaliana GN=WAKL16 PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 4.825e-19
Identity = 62/162 (38.27%), Postives = 83/162 (51.23%), Query Frame = 2
Query:    5 YLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTVGSHLMSALL*RVVLAIWTQSTIRRQQLTEKSDVYSFGVVLFEILCARPALNPTLPKEQVSLAEWAAHCHKKGILEQIMDPYLKGKIAPECFKKFAETAMKCVSDQGIERPSMGDVLWNLE 490
            YLH+GA   IIHRD+KT NILLDE   AKV+DFG SK  P     L + +  +  L            L EKSDVYSFGVVL E++  + AL    P+    L  +     K+  L +I+D  +  +       + A  A++C   +G ERP M +V   LE
Sbjct:  220 YLHSGASIPIIHRDIKTENILLDENLTAKVADFGASKLKPMDKEQLTTMV--QGTLGYLDPEYYTTWLLNEKSDVYSFGVVLMELISGQKALCFERPETSKHLVSYFVLATKENRLHEIIDDQVLNEENQREIHEAARVAVECTRLKGEERPRMIEVAAELE 379          
BLAST of CF504656 vs. ExPASy Swiss-Prot
Match: APK1A_ARATH (Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 4.825e-19
Identity = 66/186 (35.48%), Postives = 108/186 (58.06%), Query Frame = 2
Query:    5 YLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTVG--SHLMSALL*RVVLAIWTQSTIRRQQLTEKSDVYSFGVVLFEILCARPALNPTLPKEQVSLAEWA-AHCHKKGILEQIMDPYLKGKIAPECFKKFAETAMKCVSDQGIERPSMGDVLWNLEFALQLQESAEESGKVLGGGMD 553
            +LH+ ++  +I+RD KT+NILLD ++ AK+SDFGL+K GP +G  SH+ + ++     A      +    LT KSDVYSFGVVL E+L  R A++   P  + +L EWA  +   K  + +++D  L+ + + E   K A  +++C++ +   RP+M +V+ +LE    L  +       +GG MD
Sbjct:  191 FLHS-SETRVIYRDFKTSNILLDSEYNAKLSDFGLAKDGP-IGDKSHVSTRVMGTHGYA--APEYLATGHLTTKSDVYSFGVVLLELLSGRRAVDKNRPSGERNLVEWAKPYLVNKRKIFRVIDNRLQDQYSMEEACKVATLSLRCLTTEIKLRPNMSEVVSHLEHIQSLNAA-------IGGNMD 365          
BLAST of CF504656 vs. ExPASy Swiss-Prot
Match: Y5977_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana GN=At5g49770 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 8.231e-19
Identity = 61/171 (35.67%), Postives = 97/171 (56.73%), Query Frame = 2
Query:    5 YLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSK-TGPTVGSHLMSALL*RVVLAIWTQSTIRRQQLTEKSDVYSFGVVLFEILCARPALN--PTLPKEQVSLAEWAAHCHKKGILEQIMD-PYLKGKIAPECFKKFAETAMKCVSDQGIERPSMGDVLWNLEFALQL 505
            YLH  A   IIHRDVK+ NILLDE   AKV+DFGLSK  G    +H+ + +  +  +           QLTEKSDVY FGVV+ E+L  +  ++    + KE     + + + +    L++++D   ++     + F+K+ + A++CV  +G+ RP+M +V+  LE  L+L
Sbjct:  745 YLHELADPPIIHRDVKSNNILLDEHLTAKVADFGLSKLVGDPEKAHVTTQV--KGTMGYLDPEYYMTNQLTEKSDVYGFGVVMLELLTGKSPIDRGSYVVKEVKKKMDKSRNLYD---LQELLDTTIIQNSGNLKGFEKYVDVALQCVEPEGVNRPTMSEVVQELESILRL 910          
BLAST of CF504656 vs. ExPASy Swiss-Prot
Match: Y1765_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana GN=At1g07650 PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 8.231e-19
Identity = 55/169 (32.54%), Postives = 88/169 (52.07%), Query Frame = 2
Query:    5 YLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTVGSHLMSALL*RVVLAIWTQSTIRRQQLTEKSDVYSFGVVLFEILCARPALNPTLPKEQVSLAEWAAHCHKKGILEQIMDPYLKGKIAPECFKKFAETAMKCVSDQGIERPSMGDVLWNLEFALQLQE 511
            +LH  ++  I+HRD+K +N+LLD+   AK+SDFGL+K      +H+ + +     +         R  LTEK+DVYSFGVV  EI+  +   N    ++ V L +WA    ++G L +++DP L    + E        A+ C +     RP+M  V+  +E    +QE
Sbjct:  792 FLHEESRIKIVHRDIKASNVLLDKDLNAKISDFGLAKLNDDGNTHISTRIA--GTIGYMAPEYAMRGYLTEKADVYSFGVVALEIVSGKSNTNFRPTEDFVYLLDWAYVLQERGSLLELVDPTLASDYSEEEAMLMLNVALMCTNASPTLRPTMSQVVSLIEGKTAMQE 958          
BLAST of CF504656 vs. ExPASy Swiss-Prot
Match: WAKLB_ARATH (Wall-associated receptor kinase-like 2 OS=Arabidopsis thaliana GN=WAKL2 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.075e-18
Identity = 62/175 (35.43%), Postives = 91/175 (52.00%), Query Frame = 2
Query:    5 YLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTVGSHLMSALL*RVVLAIWTQSTIRRQQLTEKSDVYSFGVVLFEILCARPALNPTLPKEQVSLAEWAAHCHKKGILEQIMDPYLKGKIAPECFKKFAETAMKCVSDQGIERPSMGDVLWNLEFALQLQESAEESG 529
            YLH+ A   I HRD+KTTNILLDE+  AKVSDFG S++     +HL + +              +  + TEKSDVYSFGVVL E+L      +    +E   LA       K+  +  I+D  +K +   +     A  A +C++ +G +RP+M +V   LE    ++ S  +SG
Sbjct:  528 YLHSAASFPIYHRDIKTTNILLDERNRAKVSDFGTSRSVTIDQTHLTTQV--AGTFGYVDPEYFQSSKFTEKSDVYSFGVVLVELLTGEKPSSRVRSEENRGLAAHFVEAVKENRVLDIVDDRIKDECNMDQVMSVANLARRCLNRKGKKRPNMREVSIELE---MIRSSHYDSG 697          
BLAST of CF504656 vs. ExPASy Swiss-Prot
Match: WAK3_ARATH (Wall-associated receptor kinase 3 OS=Arabidopsis thaliana GN=WAK3 PE=2 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 1.075e-18
Identity = 67/188 (35.64%), Postives = 96/188 (51.06%), Query Frame = 2
Query:    5 YLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTVGSHLMSALL*RVVLAIWTQSTIRRQQLTEKSDVYSFGVVLFEILCARPALNPTLPKEQVSLAEWAAHCHKKGILEQIMDPYLKGKIAPECFKKFAETAMKCVSDQGIERPSMGDVLWNLEFALQLQES--------AEESGKVLGG 544
            YLH+ A   IIHRD+KT NILLDE   AKV+DFG SK  P     L + +  +  L            L EKSDVYSFGVVL E+L  + AL    P+    L  +     ++  L +I+D  +  +   +  ++ A  A +C    G ERP M +V   LE AL+++++         EE+  ++GG
Sbjct:  527 YLHSSASIPIIHRDIKTANILLDENLTAKVADFGASKLIPMDKEQLTTMV--QGTLGYLDPEYYTTGLLNEKSDVYSFGVVLMELLSGQKALCFERPQASKHLVSYFVSATEENRLHEIIDDQVLNEDNLKEIQEAARIAAECTRLMGEERPRMKEVAAKLE-ALRVEKTKHKWSDQYPEENEHLIGG 711          
The following BLAST results are available for this feature:
BLAST of CF504656 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 182
Match NameE-valueIdentityDescription
WAK5_ARATH2.166e-1938.89Wall-associated receptor kinase 5 OS=Arabidopsis t... [more]
WAK4_ARATH2.166e-1938.89Wall-associated receptor kinase 4 OS=Arabidopsis t... [more]
Y2296_ARATH2.829e-1930.11Probable receptor-like protein kinase At2g42960 OS... [more]
Y5343_ARATH3.695e-1933.33Probable LRR receptor-like serine/threonine-protei... [more]
WAKLS_ARATH4.825e-1938.27Putative wall-associated receptor kinase-like 16 O... [more]
APK1A_ARATH4.825e-1935.48Protein kinase APK1A, chloroplastic OS=Arabidopsis... [more]
Y5977_ARATH8.231e-1935.67Probable leucine-rich repeat receptor-like protein... [more]
Y1765_ARATH8.231e-1932.54Probable LRR receptor-like serine/threonine-protei... [more]
WAKLB_ARATH1.075e-1835.43Wall-associated receptor kinase-like 2 OS=Arabidop... [more]
WAK3_ARATH1.075e-1835.64Wall-associated receptor kinase 3 OS=Arabidopsis t... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-145 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-1_G12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504656 ID=CF504656; Name=CF504656; organism=Citrus sinensis; type=EST; length=601bp
ACACTATCTCCACACTGGTGCCAAACACACGATTATCCACAGAGATGTTA
AGACTACCAATATTCTTTTGGACGAGAAGTGGGTGGCAAAGGTTTCTGAT
TTTGGTTTGTCAAAAACAGGTCCCACCGTTGGATCACACCTCATGTCAGC
ACTGTTGTGAAGGGTAGTTTTGGCTATTTGGACCCAGAGTACTATCAGGC
GTCAGCAACTAACAGAGAAGTCTGATGTTTATTCTTTTGGTGTCGTGCTC
TTCGAAATCCTGTGTGCTCGACCAGCCTTAAACCCAACTTTGCCCAAGGA
GCAAGTGAGCTTGGCTGAGTGGGCTGCTCATTGTCACAAGAAAGGAATAC
TCGAACAGATTATGGACCCTTATCTCAAGGGAAAGATTGCACCTGAATGC
TTCAAAAAGTTTGCCGAGACAGCAATGAAGTGTGTATCTGATCAAGGTAT
TGAGAGGCCATCAATGGGCGATGTGCTGTGGAACCTAGAGTTCGCTTTGC
AGCTACAAGAGAGTGCAGAGGAAAGCGGCAAAGTTCTTGGCGGAGGAATG
GACATTGAGGAAGGAGCATTTGATGTCGACTGTAAAGGTAAGAAAGATCC
C
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