CF504656

Overview
NameCF504656
Unique NameCF504656
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length601
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504656 vs. ExPASy Swiss-Prot
Match: Y5344_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana GN=At1g53440 PE=1 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 1.404e-18
Identity = 54/168 (32.14%), Postives = 88/168 (52.38%), Query Frame = 2
Query:    5 YLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTVGSHLMSALL*RVVLAIWTQSTIRRQQLTEKSDVYSFGVVLFEILCARPALNPTLPKEQVSLAEWAAHCHKKGILEQIMDPYLKGKIAPECFKKFAETAMKCVSDQGIERPSMGDVLWNLEFALQLQ 508
            YLH  ++  I+HRD+K TN+LLD    AK+SDFGL+K      +H+ + +     +         R  LT+K+DVYSFGVV  EI+  +   N    +E + L +WA    ++G L +++DP L    + +   +    A+ C +     RP M  V+  L+  +++Q
Sbjct:  780 YLHEESRLKIVHRDIKATNVLLDLSLNAKISDFGLAKLDEEENTHISTRIA--GTIGYMAPEYAMRGYLTDKADVYSFGVVCLEIVSGKSNTNYRPKEEFIYLLDWAYVLQEQGSLLELVDPDLGTSFSKKEAMRMLNIALLCTNPSPTLRPPMSSVVSMLQGKIKVQ 945          
BLAST of CF504656 vs. ExPASy Swiss-Prot
Match: Y3545_ARATH (Probable receptor-like protein kinase At3g55450 OS=Arabidopsis thaliana GN=At3g55450 PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.404e-18
Identity = 59/169 (34.91%), Postives = 92/169 (54.44%), Query Frame = 2
Query:   32 IIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTVGSHLMSALL*RVVLAIWTQSTIRRQQLTEKSDVYSFGVVLFEILCARPALNPTLPKEQVSLAEWA-AHCHKKGILEQIMDPYLKGKIAPECFKKFAETAMKCVSDQGIERPSMGDVLWNLEFALQLQESAEESGKV 535
            +I+RD+K +NILLD  + AK+SDFGL++ GP      +S  +            +    L  +SDVYSFGVVL E+LC R AL+   P ++ +L +WA  +   +  +  I+D  L  +  PE   + A  A++C+S +   RP+M  V+  L   +QLQ+S  +   V
Sbjct:  193 VIYRDIKASNILLDSDFNAKLSDFGLARDGPMGEQSYVSTRV-MGTFGYAAPEYVSTGHLNARSDVYSFGVVLLELLCGRQALDHNRPAKEQNLVDWARPYLTSRRKVLLIVDTRLNSQYKPEGAVRLASIAVQCLSFEPKSRPTMDQVVRAL---VQLQDSVVKPANV 357          
BLAST of CF504656 vs. ExPASy Swiss-Prot
Match: WAKLP_ARATH (Wall-associated receptor kinase-like 15 OS=Arabidopsis thaliana GN=WAKL15 PE=2 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 1.404e-18
Identity = 60/157 (38.22%), Postives = 85/157 (54.14%), Query Frame = 2
Query:    5 YLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTVGSHLMSALL*RVVLAIWTQSTIRRQQLTEKSDVYSFGVVLFEILCARPALNPTLPKEQVSLAEWAAHCHKKGILEQIMDPYL---KGKIAPECFKKFAETAMKCVSDQGIERPSM 466
            YLH+ +   I HRDVK++NILLDE    KV+DFGLS+ G +  SH+ +    +  L           QLT+KSDVYSFGVVLFE+L  + A++    +E V+L  +     K+G L  ++DP +     +   E  K     A  CV +    RP+M
Sbjct:  471 YLHSSSSPPIYHRDVKSSNILLDENLDVKVADFGLSRLGVSDVSHVTTCA--QGTLGYLDPEYYLNFQLTDKSDVYSFGVVLFELLTCKKAIDFNREEEDVNLVVFVRKALKEGRLMDVIDPVIGIGATEKEIESMKALGVLAELCVKETRQCRPTM 625          
BLAST of CF504656 vs. ExPASy Swiss-Prot
Match: WAKLL_ARATH (Putative wall-associated receptor kinase-like 13 OS=Arabidopsis thaliana GN=WAKL13 PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.404e-18
Identity = 65/190 (34.21%), Postives = 98/190 (51.58%), Query Frame = 2
Query:    5 YLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTVGSHLMSALL*RVVLAIWTQSTIRRQQLTEKSDVYSFGVVLFEILCA-RPALNPTLPKEQVSLAEWAAHCHKKGILEQIMDPYLKGKIAPECFKKFAETAMKCVSDQGIERPSMGDVLWNLE--------FALQLQ-ESAEESGKVLGG 544
            YLHT A   I HRD+K+TNILLDEK+ AKVSDFG S++     +H  + +     +             TEKSDVYSFGVVL E++   +P +  +  +E   LA++     ++  L +I+D  ++     E     A  A++C+   G  RP M +V   LE        F +Q+Q +  +E+ K+  G
Sbjct:  566 YLHTAACSPIYHRDIKSTNILLDEKYRAKVSDFGTSRSVSIDHTHWTTVI--SGTVGYVDPEYYGSSHFTEKSDVYSFGVVLVELITGEKPVITLSETQEITGLADYFRLAMRENRLFEIIDARIRNDCKLEQVIAVANLALRCLKKTGKTRPDMREVSTALERICSAPEDFQVQIQIDEEDETTKLFRG 753          
BLAST of CF504656 vs. ExPASy Swiss-Prot
Match: APK2A_ARATH (Protein kinase 2A, chloroplastic OS=Arabidopsis thaliana GN=APK2A PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.404e-18
Identity = 67/178 (37.64%), Postives = 98/178 (55.06%), Query Frame = 2
Query:    5 YLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPT-VGSHLMSALL*RVVLAIWTQSTIRRQQLTEKSDVYSFGVVLFEILCARPALNPTLPKEQVSLAEWAA-HCHKKGILEQIMDPYLKGKIAPECFKKFAETAMKCVSDQGIERPSMGDVLWNLEFALQLQESAEESGK 532
            +LH  AK  +I+RD K  NILLD  + AK+SDFGL+K GPT   +H+ + ++     A      +   +LT KSDVYSFGVVL E++  R A++ +    + SL +WA  +   K  L +IMD  L G+   +     A  A++C++     RP M +VL  LE   QL+  A+   K
Sbjct:  207 FLHE-AKSQVIYRDFKAANILLDADFNAKLSDFGLAKAGPTGDNTHVSTKVIGTHGYA--APEYVATGRLTAKSDVYSFGVVLLELISGRRAMDNSNGGNEYSLVDWATPYLGDKRKLFRIMDTKLGGQYPQKGAFTAANLALQCLNPDAKLRPKMSEVLVTLE---QLESVAKPGTK 378          
BLAST of CF504656 vs. ExPASy Swiss-Prot
Match: ACCR4_ARATH (Serine/threonine-protein kinase-like protein CCR4 OS=Arabidopsis thaliana GN=CCR4 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.834e-18
Identity = 69/174 (39.66%), Postives = 91/174 (52.30%), Query Frame = 2
Query:    5 YLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTVG---SHLMSALL*RVVLAIWTQSTIRRQQLTEKSDVYSFGVVLFEILCARPALNPTLPKEQVSLAEWAA------HCHKKGILEQIMDPYLKGKIAPECFKKFAETAMKCVSDQGIERPSMGDVLWNLEFAL 499
            YLH      +IHRD+K++NILLD  W AKVSDFGLS+ GPT     SHL  +L     L        + QQLT KSDVYSFGVVL E+L    A++    +   +L E+          H+  IL+Q + P    +I  E        A +C+     +RPSM +V+  LE AL
Sbjct:  566 YLHEFIVPPVIHRDIKSSNILLDATWTAKVSDFGLSQMGPTEEDDVSHL--SLHAAGTLGYIDPEYYKFQQLTTKSDVYSFGVVLLELLSGHKAIHNNEDENPRNLVEYVVPYILLDEAHR--ILDQRIPPPTPYEI--EAVAHVGYLAAECLMPCSRKRPSMVEVVSKLESAL 733          
BLAST of CF504656 vs. ExPASy Swiss-Prot
Match: Y1561_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thaliana GN=At1g56130 PE=1 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 2.395e-18
Identity = 61/188 (32.45%), Postives = 93/188 (49.47%), Query Frame = 2
Query:    5 YLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTVGSHLMSALL*RVVLAIWTQSTIRRQQLTEKSDVYSFGVVLFEILCARPALNPTLPKEQVSLAEWAAHCHKKGILEQIMDPYLKGKIAPECFKKFAETAMKCVSDQGIERPSMGDVLWNLEFALQLQESAEESGKVLGGGMDIEEGA 568
            YLH  A   I+HRDVK +NILLD + V ++SDFGL+K      +H+ + +     +         R  LTEK+DVY+FGVV  E++  RP  +  L +E+  L EWA + H+K    +++D  L      E  K+    A+ C       RP M  V+  L   +++ +   + G V     D   G+
Sbjct:  805 YLHEEASVRIVHRDVKASNILLDSRLVPQISDFGLAKLYDDKKTHISTRVA--GTIGYLAPEYAMRGHLTEKTDVYAFGVVALELVSGRPNSDENLEEEKKYLLEWAWNLHEKSRDIELIDDKLTDFNMEEA-KRMIGIALLCTQTSHALRPPMSRVVAMLSGDVEIGDVTSKPGYVSDWRFDDTTGS 989          
BLAST of CF504656 vs. ExPASy Swiss-Prot
Match: Y1534_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Arabidopsis thaliana GN=At1g53420 PE=2 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 2.395e-18
Identity = 54/162 (33.33%), Postives = 82/162 (50.62%), Query Frame = 2
Query:    5 YLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTVGSHLMSALL*RVVLAIWTQSTIRRQQLTEKSDVYSFGVVLFEILCARPALNPTLPKEQVSLAEWAAHCHKKGILEQIMDPYLKGKIAPECFKKFAETAMKCVSDQGIERPSMGDVLWNLE 490
            YLH  ++  I+HRD+K TN+LLD++   K+SDFGL+K      +H+ + +               R  LT+K+DVYSFG+V  EI+  R             L +W     +K  L +++DP L  +   E      + A+ C S +  ERPSM +V+  LE
Sbjct:  737 YLHEESRLKIVHRDIKATNVLLDKQLNPKISDFGLAKLDEEDSTHISTRI--AGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVHGRSNKIERSKNNTFYLIDWVEVLREKNNLLELVDPRLGSEYNREEAMTMIQIAIMCTSSEPCERPSMSEVVKMLE 896          
BLAST of CF504656 vs. ExPASy Swiss-Prot
Match: WAKLO_ARATH (Wall-associated receptor kinase-like 14 OS=Arabidopsis thaliana GN=WAKL14 PE=2 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 2.395e-18
Identity = 62/170 (36.47%), Postives = 90/170 (52.94%), Query Frame = 2
Query:    5 YLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTVGSHLMSALL*RVVLAIWTQSTIRRQ-----QLTEKSDVYSFGVVLFEILCARPALNPTLPKEQVSLAEWAAHCHKKGILEQIMDPYLKGKI---APECFKKFAETAMKCVSDQGIERPSMGDVLWNLE 490
            YLH+     I HRD+K+TNILLD  + +KV+DFGLS+ G T  SH+ +A          T   +  Q      L++KSDVYSFGVVL EI+     ++ T P  +++LA  A      G +++I+DP L   +           AE A +C++     RP+M +V   LE
Sbjct:  459 YLHSSMNPPIYHRDIKSTNILLDYDFNSKVADFGLSRLGMTESSHISTA-------PQGTPGYLDPQYHQCFHLSDKSDVYSFGVVLAEIITGLKVVDFTRPHTEINLAALAVDKIGSGCIDEIIDPILDLDLDAWTLSSIHTVAELAFRCLAFHSDMRPTMTEVADELE 621          
BLAST of CF504656 vs. ExPASy Swiss-Prot
Match: APK2B_ARATH (Protein kinase 2B, chloroplastic OS=Arabidopsis thaliana GN=APK2B PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 5.335e-18
Identity = 65/177 (36.72%), Postives = 99/177 (55.93%), Query Frame = 2
Query:    5 YLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTVG-SHLMSALL*RVVLAIWTQSTIRRQQLTEKSDVYSFGVVLFEILCARPALNPTLPKEQVSLAEWAA-HCHKKGILEQIMDPYLKGKIAPECFKKFAETAMKCVSDQGIERPSMGDVLWNLEFALQLQESAEESG 529
            +LH  AK  +I+RD K  NILLD ++ +K+SDFGL+K GPT   +H+ + ++     A      +   +LT KSDVYSFGVVL E+L  R A++ +    + SL +WA  +   K  L +IMD  L G+   +     A  A++C++     RP M +VL  L+   QL+ +   +G
Sbjct:  204 FLHD-AKSQVIYRDFKAANILLDAEFNSKLSDFGLAKAGPTGDKTHVSTQVMGTHGYA--APEYVATGRLTAKSDVYSFGVVLLELLSGRRAVDKSKVGMEQSLVDWATPYLGDKRKLFRIMDTRLGGQYPQKGAYTAASLALQCLNPDAKLRPKMSEVLAKLD---QLESTKPGTG 374          
The following BLAST results are available for this feature:
BLAST of CF504656 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 182
Match NameE-valueIdentityDescription
Y5344_ARATH1.404e-1832.14Probable LRR receptor-like serine/threonine-protei... [more]
Y3545_ARATH1.404e-1834.91Probable receptor-like protein kinase At3g55450 OS... [more]
WAKLP_ARATH1.404e-1838.22Wall-associated receptor kinase-like 15 OS=Arabido... [more]
WAKLL_ARATH1.404e-1834.21Putative wall-associated receptor kinase-like 13 O... [more]
APK2A_ARATH1.404e-1837.64Protein kinase 2A, chloroplastic OS=Arabidopsis th... [more]
ACCR4_ARATH1.834e-1839.66Serine/threonine-protein kinase-like protein CCR4 ... [more]
Y1561_ARATH2.395e-1832.45Probable LRR receptor-like serine/threonine-protei... [more]
Y1534_ARATH2.395e-1833.33Probable LRR receptor-like serine/threonine-protei... [more]
WAKLO_ARATH2.395e-1836.47Wall-associated receptor kinase-like 14 OS=Arabido... [more]
APK2B_ARATH5.335e-1836.72Protein kinase 2B, chloroplastic OS=Arabidopsis th... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-145 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-1_G12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504656 ID=CF504656; Name=CF504656; organism=Citrus sinensis; type=EST; length=601bp
ACACTATCTCCACACTGGTGCCAAACACACGATTATCCACAGAGATGTTA
AGACTACCAATATTCTTTTGGACGAGAAGTGGGTGGCAAAGGTTTCTGAT
TTTGGTTTGTCAAAAACAGGTCCCACCGTTGGATCACACCTCATGTCAGC
ACTGTTGTGAAGGGTAGTTTTGGCTATTTGGACCCAGAGTACTATCAGGC
GTCAGCAACTAACAGAGAAGTCTGATGTTTATTCTTTTGGTGTCGTGCTC
TTCGAAATCCTGTGTGCTCGACCAGCCTTAAACCCAACTTTGCCCAAGGA
GCAAGTGAGCTTGGCTGAGTGGGCTGCTCATTGTCACAAGAAAGGAATAC
TCGAACAGATTATGGACCCTTATCTCAAGGGAAAGATTGCACCTGAATGC
TTCAAAAAGTTTGCCGAGACAGCAATGAAGTGTGTATCTGATCAAGGTAT
TGAGAGGCCATCAATGGGCGATGTGCTGTGGAACCTAGAGTTCGCTTTGC
AGCTACAAGAGAGTGCAGAGGAAAGCGGCAAAGTTCTTGGCGGAGGAATG
GACATTGAGGAAGGAGCATTTGATGTCGACTGTAAAGGTAAGAAAGATCC
C
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