CF504656

Overview
NameCF504656
Unique NameCF504656
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length601
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13353 contig Csv1_Contig13353:842..1439. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF504656 vs. ExPASy Swiss-Prot
Match: Y1684_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana GN=At1g06840 PE=1 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 6.968e-18
Identity = 59/172 (34.30%), Postives = 89/172 (51.74%), Query Frame = 2
Query:    5 YLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTVGSHLMSALL*RVVL----AIWTQSTIRRQQLTEKSDVYSFGVVLFEILCA-RPALNPTLPKEQVSLAEWAAHCHKKGILEQIMDPYLKGKIAPECFKKFAETAMKCVSDQGIERPSMGDVLWNLEFALQL 505
            YLHT A   I HRD+K +NILLD ++ AKV+DFGLS+  P      +S      V+               QLT+KSDVYS GVVL E+    +P  +      ++++A      ++ G +   +D  +   +  EC +KFA  A++C  ++   RPSM +V+  LE   +L
Sbjct:  736 YLHTEANPPIFHRDIKASNILLDSRFTAKVADFGLSRLAPVPDMEGISPQHVSTVVKGTPGYLDPEYFLTHQLTDKSDVYSLGVVLLELFTGMQPITHGKNIVREINIA------YESGSILSTVDKRM-SSVPDECLEKFATLALRCCREETDARPSMAEVVRELEIIWEL 900          
BLAST of CF504656 vs. ExPASy Swiss-Prot
Match: WAKLD_ARATH (Wall-associated receptor kinase-like 4 OS=Arabidopsis thaliana GN=WAKL4 PE=2 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 6.968e-18
Identity = 56/162 (34.57%), Postives = 85/162 (52.47%), Query Frame = 2
Query:    5 YLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTVGSHLMSALL*RVVLAIWTQSTIRRQQLTEKSDVYSFGVVLFEILCARPALNPTLPKEQVSLAEWAAHCHKKGILEQIMDPYLKGKIAPECFKKFAETAMKCVSDQGIERPSMGDVLWNLE 490
            YLH+ A   I HRD+KTTNILLDEK+  KVSDFG S++     +HL + +              +  + T+KSDVYSFGVVL E++  +   +    +E    A       K+     I+D  +K +   +     A+ A +C++ +G +RP+M +V   LE
Sbjct:  536 YLHSAASFPIYHRDIKTTNILLDEKYQVKVSDFGTSRSVTIDQTHLTTQV--AGTFGYVDPEYFQSSKFTDKSDVYSFGVVLVELITGKNPSSRVQSEENRGFAAHFVAAVKENRFLDIVDERIKDECNLDQVMAVAKLAKRCLNRKGKKRPNMREVSVELE 695          
BLAST of CF504656 vs. ExPASy Swiss-Prot
Match: SERK4_ARATH (Somatic embryogenesis receptor kinase 4 OS=Arabidopsis thaliana GN=SERK4 PE=1 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 6.968e-18
Identity = 55/164 (33.54%), Postives = 86/164 (52.44%), Query Frame = 2
Query:    5 YLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTVGSHLMSALL*RVVLAIWTQSTIRRQQLTEKSDVYSFGVVLFEILCARPA--LNPTLPKEQVSLAEWAAHCHKKGILEQIMDPYLKGKIAPECFKKFAETAMKCVSDQGIERPSMGDVLWNLE 490
            YLH      IIHRDVK  NILLDE++ A V DFGL+K      SH+ +A+  R  +       +   + +EK+DV+ +GV+L E++  + A  L      + + L +W     K+  LE ++D  L+GK      ++  + A+ C     +ERP M +V+  LE
Sbjct:  408 YLHDHCDQKIIHRDVKAANILLDEEFEAVVGDFGLAKLMNYNDSHVTTAV--RGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQKAFDLARLANDDDIMLLDWVKEVLKEKKLESLVDAELEGKYVETEVEQLIQMALLCTQSSAMERPKMSEVVRMLE 569          
BLAST of CF504656 vs. ExPASy Swiss-Prot
Match: WAKLG_ARATH (Wall-associated receptor kinase-like 8 OS=Arabidopsis thaliana GN=WAKL8 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 9.100e-18
Identity = 57/162 (35.19%), Postives = 85/162 (52.47%), Query Frame = 2
Query:    5 YLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTVGSHLMSALL*RVVLAIWTQSTIRRQQLTEKSDVYSFGVVLFEILCARPALNPTLPKEQVSLAEWAAHCHKKGILEQIMDPYLKGKIAPECFKKFAETAMKCVSDQGIERPSMGDVLWNLE 490
            YLH+     I HRDVK+TNILLDEK  AKVSDFG+S++     +HL + +  +  +       ++    T KSDVYSFGV+L E+L     ++    +E   L  +     +   L +I+D  +K +   E     A+ A +C+S     RP+M DV   L+
Sbjct:  502 YLHSAVSIPIYHRDVKSTNILLDEKHRAKVSDFGISRSVAIDDTHLTTIV--QGTIGYVDPEYLQSNHFTGKSDVYSFGVLLIELLTGEKPVSLLRRQEVRMLGAYFLEAMRNDRLHEILDARIKEECDREEVLAVAKLARRCLSLNSEHRPTMRDVFIELD 661          
BLAST of CF504656 vs. ExPASy Swiss-Prot
Match: WAK1_ARATH (Wall-associated receptor kinase 1 OS=Arabidopsis thaliana GN=WAK1 PE=1 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 9.100e-18
Identity = 66/188 (35.11%), Postives = 96/188 (51.06%), Query Frame = 2
Query:    5 YLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTVGSHLMSALL*RVVLAIWTQSTIRRQQLTEKSDVYSFGVVLFEILCARPALNPTLPKEQVSLAEWAAHCHKKGILEQIMDPYLKGKIAPECFKKFAETAMKCVSDQGIERPSMGDVLWNLEFALQLQES--------AEESGKVLGG 544
            YLH+ A   IIHRD+KT NILLD    AKV+DFG S+  P     L + +  +  L            L EKSDVYSFGVVL E+L  + AL    P+    L  + A   K+  L++I+   +  +   +  ++ A  A +C    G ERP M +V   LE AL+++++         EE+  ++GG
Sbjct:  521 YLHSSASIPIIHRDIKTANILLDVNLTAKVADFGASRLIPMDKEELETMV--QGTLGYLDPEYYNTGLLNEKSDVYSFGVVLMELLSGQKALCFKRPQSSKHLVSYFATATKENRLDEIIGGEVMNEDNLKEIQEAARIAAECTRLMGEERPRMKEVAAKLE-ALRVEKTKHKWSDQYPEENEHLIGG 705          
BLAST of CF504656 vs. ExPASy Swiss-Prot
Match: Y2317_ARATH (Probable leucine-rich repeat receptor-like protein kinase At2g33170 OS=Arabidopsis thaliana GN=At2g33170 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.027e-17
Identity = 64/183 (34.97%), Postives = 90/183 (49.18%), Query Frame = 2
Query:    5 YLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTVGSHLMSALL*RVVLAIWTQSTIRRQQLTEKSDVYSFGVVLFEILCARPALNPTLPKEQVSLAEWAA-HCHKKGILEQIMDPYLKGKIAPECFKKFAETAMK----CVSDQGIERPSMGDVLWNLEFALQLQESAEESGKVL 538
            YLH   K  IIHRD+K+ NIL+DE + A V DFGL+K      S  +SA+                 ++TEK D+YSFGVVL E+L  +  + P   ++   LA W   H     +  +I+DPYL  K+  +       T  K    C      +RP+M +V+      L L ES E +GKV+
Sbjct:  939 YLHHDCKPRIIHRDIKSNNILIDENFEAHVGDFGLAKVIDMPLSKSVSAV--AGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELLTGKAPVQPL--EQGGDLATWTRNHIRDHSLTSEILDPYLT-KVEDDVILNHMITVTKIAVLCTKSSPSDRPTMREVV------LMLIESGERAGKVI 1110          
BLAST of CF504656 vs. ExPASy Swiss-Prot
Match: RLCK7_ARATH (Probable serine/threonine-protein kinase RLCKVII OS=Arabidopsis thaliana GN=At1g07870 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.027e-17
Identity = 56/165 (33.94%), Postives = 88/165 (53.33%), Query Frame = 2
Query:    5 YLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTVG-SHLMSALL*RVVLAIWTQSTIRRQQLTEKSDVYSFGVVLFEILCARPALNPTLPKEQVSLAEWAAHCHK-KGILEQIMDPYLKGKIAPECFKKFAETAMKCVSDQGIERPSMGDVLWNLEF 493
            YLH      +I+RD+K +NILL E +  K+SDFGL+K GP+   +H+ + ++                QLT KSD+YSFGVVL E++  R A++ T  ++  +L  WA    K +    +++DP L+G+       +    +  CV +Q   RP + DV+  L F
Sbjct:  217 YLHDRMTPPVIYRDLKCSNILLGEDYQPKLSDFGLAKVGPSGDKTHVSTRVM--GTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDNTKTRKDQNLVGWARPLFKDRRNFPKMVDPLLQGQYPVRGLYQALAISAMCVQEQPTMRPVVSDVVLALNF 379          
BLAST of CF504656 vs. ExPASy Swiss-Prot
Match: WAK2_ARATH (Wall-associated receptor kinase 2 OS=Arabidopsis thaliana GN=WAK2 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 4.516e-17
Identity = 63/165 (38.18%), Postives = 81/165 (49.09%), Query Frame = 2
Query:    5 YLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTVGSHLMSALL*RVVLAIWTQSTIRRQQLTEKSDVYSFGVVLFEILCARPAL---NPTLPKEQVSLAEWAAHCHKKGILEQIMDPYLKGKIAPECFKKFAETAMKCVSDQGIERPSMGDVLWNLE 490
            YLH+ A   IIHRD+KT NILLD+   AKV+DFG S+  P     L + +  +  L            L EKSDVYSFGVVL E+L  + AL    P  PK  VS     A   K     +I+D  +  +      ++ A  A +C    G ERP M +V   LE
Sbjct:  516 YLHSSASIPIIHRDIKTANILLDKNLTAKVADFGASRLIPMDKEQLTTIV--QGTLGYLDPEYYNTGLLNEKSDVYSFGVVLMELLSGQKALCFERPHCPKNLVSC---FASATKNNRFHEIIDGQVMNEDNQREIQEAARIAAECTRLMGEERPRMKEVAAELE 675          
BLAST of CF504656 vs. ExPASy Swiss-Prot
Match: SERK5_ARATH (Somatic embryogenesis receptor kinase 5 OS=Arabidopsis thaliana GN=SERK5 PE=1 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 4.516e-17
Identity = 54/164 (32.93%), Postives = 85/164 (51.83%), Query Frame = 2
Query:    5 YLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTVGSHLMSALL*RVVLAIWTQSTIRRQQLTEKSDVYSFGVVLFEILCARPA--LNPTLPKEQVSLAEWAAHCHKKGILEQIMDPYLKGKIAPECFKKFAETAMKCVSDQGIERPSMGDVLWNLE 490
            YLH      IIH DVK  NILLDE++ A V DFGL+K      SH+ +A+  R  +       +   + +EK+DV+ +GV+L E++  + A  L      + + L +W     K+  LE ++D  L+GK      ++  + A+ C     +ERP M +V+  LE
Sbjct:  389 YLHDHCDQKIIHLDVKAANILLDEEFEAVVGDFGLAKLMNYNDSHVTTAV--RGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQKAFDLARLANDDDIMLLDWVKEVLKEKKLESLVDAELEGKYVETEVEQLIQMALLCTQSSAMERPKMSEVVRMLE 550          
BLAST of CF504656 vs. ExPASy Swiss-Prot
Match: CRK1_ARATH (Cysteine-rich receptor-like protein kinase 1 OS=Arabidopsis thaliana GN=CRK1 PE=2 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 4.516e-17
Identity = 55/162 (33.95%), Postives = 85/162 (52.47%), Query Frame = 2
Query:    5 YLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTVGSHLMSALL*RVVLAIWTQSTIRRQQLTEKSDVYSFGVVLFEILCARPALNPTLPKEQVSLAEWAAHCHKKGILEQIMDPYLKGKIAPECFKKFAETAMKCVSDQGIERPSMGDVLWNLE 490
            YLH G++  IIHRD+KT+NILLD     K++DFGL ++  T  +   + +     L       + + QLTEK+DVY+FGV++ EI+  +     T     V  + W     K   L++ +DP LKG    E   K  +  + CV      RPSM ++++ L+
Sbjct:  430 YLHRGSEVKIIHRDIKTSNILLDRNLSPKIADFGLIRSMGTDKTQTNTGI--AGTLGYLAPEYLIKGQLTEKADVYAFGVLIIEIVTGKKNNAFTQGTSSVLYSVW--EHFKANTLDRSIDPRLKGSFVEEEALKVLQIGLLCVQSSVELRPSMSEIVFMLQ 587          
The following BLAST results are available for this feature:
BLAST of CF504656 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 182
Match NameE-valueIdentityDescription
Y1684_ARATH6.968e-1834.30Probable LRR receptor-like serine/threonine-protei... [more]
WAKLD_ARATH6.968e-1834.57Wall-associated receptor kinase-like 4 OS=Arabidop... [more]
SERK4_ARATH6.968e-1833.54Somatic embryogenesis receptor kinase 4 OS=Arabido... [more]
WAKLG_ARATH9.100e-1835.19Wall-associated receptor kinase-like 8 OS=Arabidop... [more]
WAK1_ARATH9.100e-1835.11Wall-associated receptor kinase 1 OS=Arabidopsis t... [more]
Y2317_ARATH2.027e-1734.97Probable leucine-rich repeat receptor-like protein... [more]
RLCK7_ARATH2.027e-1733.94Probable serine/threonine-protein kinase RLCKVII O... [more]
WAK2_ARATH4.516e-1738.18Wall-associated receptor kinase 2 OS=Arabidopsis t... [more]
SERK5_ARATH4.516e-1732.93Somatic embryogenesis receptor kinase 5 OS=Arabido... [more]
CRK1_ARATH4.516e-1733.95Cysteine-rich receptor-like protein kinase 1 OS=Ar... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-145 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-1_G12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504656 ID=CF504656; Name=CF504656; organism=Citrus sinensis; type=EST; length=601bp
ACACTATCTCCACACTGGTGCCAAACACACGATTATCCACAGAGATGTTA
AGACTACCAATATTCTTTTGGACGAGAAGTGGGTGGCAAAGGTTTCTGAT
TTTGGTTTGTCAAAAACAGGTCCCACCGTTGGATCACACCTCATGTCAGC
ACTGTTGTGAAGGGTAGTTTTGGCTATTTGGACCCAGAGTACTATCAGGC
GTCAGCAACTAACAGAGAAGTCTGATGTTTATTCTTTTGGTGTCGTGCTC
TTCGAAATCCTGTGTGCTCGACCAGCCTTAAACCCAACTTTGCCCAAGGA
GCAAGTGAGCTTGGCTGAGTGGGCTGCTCATTGTCACAAGAAAGGAATAC
TCGAACAGATTATGGACCCTTATCTCAAGGGAAAGATTGCACCTGAATGC
TTCAAAAAGTTTGCCGAGACAGCAATGAAGTGTGTATCTGATCAAGGTAT
TGAGAGGCCATCAATGGGCGATGTGCTGTGGAACCTAGAGTTCGCTTTGC
AGCTACAAGAGAGTGCAGAGGAAAGCGGCAAAGTTCTTGGCGGAGGAATG
GACATTGAGGAAGGAGCATTTGATGTCGACTGTAAAGGTAAGAAAGATCC
C
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