CF504656

Overview
NameCF504656
Unique NameCF504656
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length601
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13353 contig Csv1_Contig13353:842..1439. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF504656 vs. ExPASy Swiss-Prot
Match: CX32_ARATH (Probable serine/threonine-protein kinase Cx32, chloroplastic OS=Arabidopsis thaliana GN=At4g35600 PE=1 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 5.899e-17
Identity = 58/164 (35.37%), Postives = 87/164 (53.05%), Query Frame = 2
Query:    5 YLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPT-VGSHLMSALL*RVVLAIWTQSTIRRQQLTEKSDVYSFGVVLFEILCARPALNPTLPKEQVSLAEW-AAHCHKKGILEQIMDPYLKGKIAPECFKKFAETAMKCVSDQGIERPSMGDVLWNLE 490
            +LH+  +  +I+RD K +NILLD  + AK+SDFGL+K GP    SH+ + ++     A      +    L  KSDV++FGVVL EI+    A N   P+ Q SL +W       K  ++QIMD  +KG+   +   + A   + C+      RP M +V+  LE
Sbjct:  206 FLHS-LQREVIYRDFKASNILLDSNYDAKLSDFGLAKLGPADEKSHVTTRIMGTYGYA--APEYMATGHLYVKSDVFAFGVVLLEIMTGLTAHNTKRPRGQESLVDWLRPELSNKHRVKQIMDKGIKGQYTTKVATEMARITLSCIEPDPKNRPHMKEVVEVLE 366          
BLAST of CF504656 vs. ExPASy Swiss-Prot
Match: Y1570_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g05700 OS=Arabidopsis thaliana GN=At1g05700 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 7.704e-17
Identity = 58/171 (33.92%), Postives = 88/171 (51.46%), Query Frame = 2
Query:    5 YLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTVGSHLMSALL*RVVLAIWTQSTIRRQQLTEKSDVYSFGVVLFEILCARPALNPTLPKEQVSLAEWA-AHCHKKGILEQIMDPYLKGKIAPECFKKFAETAMKCVSDQGIERPSMGDVLWNLEFALQLQES 514
            YLH G K  I+HRDVKT+NILL+EK  AK++DFGLS++  T     +S L+                 L EKSD+YSFGVVL E++  +  +  +  K +V +++W  +       +  ++D  +          K  E A+  VS    +RP+M  ++  L   LQ +ES
Sbjct:  680 YLHCGCKPPIVHRDVKTSNILLNEKNRAKLADFGLSRSFHTESRSHVSTLV-AGTPGYLDPLCFETNGLNEKSDIYSFGVVLLEMITGKTVIKESQTK-RVHVSDWVISILRSTNDVNNVIDSKMAKDFDVNSVWKVVELALSSVSQNVSDRPNMPHIVRGLNECLQREES 848          
BLAST of CF504656 vs. ExPASy Swiss-Prot
Match: BAK1_ARATH (BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana GN=BAK1 PE=1 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 7.704e-17
Identity = 55/164 (33.54%), Postives = 86/164 (52.44%), Query Frame = 2
Query:    5 YLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTVGSHLMSALL*RVVLAIWTQSTIRRQQLTEKSDVYSFGVVLFEILCARPA--LNPTLPKEQVSLAEWAAHCHKKGILEQIMDPYLKGKIAPECFKKFAETAMKCVSDQGIERPSMGDVLWNLE 490
            YLH      IIHRDVK  NILLDE++ A V DFGL+K      +H+ +A+  R  +       +   + +EK+DV+ +GV+L E++  + A  L      + V L +W     K+  LE ++D  L+G    E  ++  + A+ C     +ERP M +V+  LE
Sbjct:  403 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAV--RGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 564          
BLAST of CF504656 vs. ExPASy Swiss-Prot
Match: Y4265_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g26540 OS=Arabidopsis thaliana GN=At4g26540 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.314e-16
Identity = 67/196 (34.18%), Postives = 95/196 (48.47%), Query Frame = 2
Query:    5 YLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKT---GPTVGSHLMSALL*RVVLAIW---TQSTIRRQQLTEKSDVYSFGVVLFEILCARPALNPTLPKEQVSLAEWAA-HCHKKGILEQIMDPYLKGK---IAPECFKKFAETAMKCVSDQGIERPSMGDVLWNLEFALQLQESAEESGKVLGGGMDIEE 562
            YLH     TIIH DVK  N+LL   +   ++DFGL++T    P  G  L        +   +          Q++TEKSDVYS+GVVL E+L  +  L+P LP     L +W   H  +K    +++DP L G+   I  E  +  A  A  CVS++  ERP M DV+  L     +     E+ K+  GG   +E
Sbjct:  870 YLHHDCLPTIIHGDVKAMNVLLGPHFEPYLADFGLARTISGYPNTGIDLAKPTNRPPMAGSYGYMAPEHASMQRITEKSDVYSYGVVLLEVLTGKHPLDPDLP-GGAHLVKWVRDHLAEKKDPSRLLDPRLDGRTDSIMHEMLQTLA-VAFLCVSNKANERPLMKDVVAMLTEIRHIDVGRSETEKIKAGGCGSKE 1063          
BLAST of CF504656 vs. ExPASy Swiss-Prot
Match: SRF7_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 7 OS=Arabidopsis thaliana GN=SRF7 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.716e-16
Identity = 58/187 (31.02%), Postives = 89/187 (47.59%), Query Frame = 2
Query:    5 YLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTVGSHLMSALL*RVVLAIWTQSTIRRQQLTEKSDVYSFGVVLFEILCARPALNPTLPKEQVSLAEWAA-HCHKKGILEQIMDPYLKGKIAPECFKKFAETAMKCVSDQGIERPSMGDVLWNLEFALQLQESAEESGKVLGGGMDIEE 562
            YLH     +I+H+++K+ NILLD +    +SD GL+   PT        LL +         T    Q + KSDVYSFGVV+ E+L  R   + T  + + SL  WA    H    L +++DP LKG    +   +FA+    CV  +   RP M +V+  L   +Q    ++ +  V  G   + +
Sbjct:  534 YLHEVCSPSIVHKNIKSANILLDSELNPHLSDSGLASFLPTANE-----LLNQNDEGYSAPETSMSGQYSLKSDVYSFGVVMLELLTGRKPFDSTRSRSEQSLVRWATPQLHDIDALGKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVVLVQRANMSKRTVGVGSGSSGVND 715          
BLAST of CF504656 vs. ExPASy Swiss-Prot
Match: SERK2_ARATH (Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana GN=SERK2 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 2.927e-16
Identity = 52/164 (31.71%), Postives = 85/164 (51.83%), Query Frame = 2
Query:    5 YLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTVGSHLMSALL*RVVLAIWTQSTIRRQQLTEKSDVYSFGVVLFEILCARPA--LNPTLPKEQVSLAEWAAHCHKKGILEQIMDPYLKGKIAPECFKKFAETAMKCVSDQGIERPSMGDVLWNLE 490
            YLH      IIHRDVK  NILLDE++ A V DFGL++      +H+ +A+  R  +       +   + +EK+DV+ +G++L E++  + A  L      + V L +W     K+  LE ++DP L+        ++  + A+ C     +ERP M +V+  LE
Sbjct:  419 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLARLMDYKDTHVTTAV--RGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLQSNYTEAEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 580          
BLAST of CF504656 vs. ExPASy Swiss-Prot
Match: SERK1_ARATH (Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana GN=SERK1 PE=1 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 2.927e-16
Identity = 53/164 (32.32%), Postives = 85/164 (51.83%), Query Frame = 2
Query:    5 YLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTVGSHLMSALL*RVVLAIWTQSTIRRQQLTEKSDVYSFGVVLFEILCARPA--LNPTLPKEQVSLAEWAAHCHKKGILEQIMDPYLKGKIAPECFKKFAETAMKCVSDQGIERPSMGDVLWNLE 490
            YLH      IIHRDVK  NILLDE++ A V DFGL+K      +H+ +A+  R  +       +   + +EK+DV+ +G++L E++  + A  L      + V L +W     K+  LE ++DP L+        ++  + A+ C     +ERP M +V+  LE
Sbjct:  416 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAV--RGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLQTNYEERELEQVIQVALLCTQGSPMERPKMSEVVRMLE 577          
BLAST of CF504656 vs. ExPASy Swiss-Prot
Match: RLK5_ARATH (Receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=RLK5 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 2.927e-16
Identity = 57/163 (34.97%), Postives = 82/163 (50.31%), Query Frame = 2
Query:    5 YLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTVGSHLMSALL*RV-VLAIWTQSTIRRQQLTEKSDVYSFGVVLFEILCARPALNPTLPKEQVSLAEWAAHCHKKGILEQIMDPYLKGKIAPECFKKFAETAMKCVSDQGIERPSMGDVLWNLE 490
            YLH      I+HRDVK++NILLD  + AKV+DFG++K G   GS    A+              +   ++ EKSD+YSFGVVL E++  +   +  L  +   +A+W      K  LE ++DP L  K   E   K     + C S   + RPSM  V+  L+
Sbjct:  806 YLHHDCVPPIVHRDVKSSNILLDSDYGAKVADFGIAKVGQMSGSKTPEAMSGIAGSCGYIAPEYVYTLRVNEKSDIYSFGVVLLELVTGKQPTDSELGDK--DMAKWVCTALDKCGLEPVIDPKLDLKFKEE-ISKVIHIGLLCTSPLPLNRPSMRKVVIMLQ 965          
BLAST of CF504656 vs. ExPASy Swiss-Prot
Match: Y1105_ARATH (Probable receptor-like protein kinase At1g11050 OS=Arabidopsis thaliana GN=At1g11050 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 4.994e-16
Identity = 62/170 (36.47%), Postives = 84/170 (49.41%), Query Frame = 2
Query:    5 YLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTVGSHLMSALL*RVVLAIWTQSTIRRQQLTEKSDVYSFGVVLFEILCARPALNPTL--PKEQVSLAEWAAHCHKKGILEQIMDPYL-----KGKIAPE-CFKKFAETAMKCVSDQGIERPSMGDVLWNLE 490
            YLH G K  I HRD+K TNILLD    A+V+DFGL+K      SHL + +                 QLTEKSDVYSFGVV+ EI+C R AL+ +         + +WA    K G  E+ ++  L      G   P+   ++F +  + C       RP++ D L  LE
Sbjct:  413 YLHYGVKPAIYHRDIKGTNILLDVDMRARVADFGLAKQSREGESHLTTRV--AGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLSTSGSPNTFLITDWAWSLVKAGKTEEALEQSLLREEGSGLSNPKGIMERFLQVGILCAHVLVALRPTILDALKMLE 580          
BLAST of CF504656 vs. ExPASy Swiss-Prot
Match: RKF1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RFK1 OS=Arabidopsis thaliana GN=RKF1 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 8.518e-16
Identity = 60/179 (33.52%), Postives = 90/179 (50.28%), Query Frame = 2
Query:    5 YLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTVGSHLMSALL*RV-----VLAIWTQSTIRRQQLTEKSDVYSFGVVLFEILCARPALNPTLPKEQVSLAEWAAHCHKKGILEQIMDPYLKGKIAPECFKKFAETAMK----CVSDQGIERPSMGDVLWNLEFALQLQES 514
            +LH  +    +HRD+K TNILLD+    K+SDFGL++      +H+ + +   +       A+W         LT K+DVYSFGV++ EI+      N     + V L E+A  C + G L Q++D  L+    PE  +K AE  +K    C S    +RP M +V+  LE    + ES
Sbjct:  794 FLHEESPLKFVHRDIKATNILLDKDLTPKISDFGLARLDEEEKTHISTKVAGTIGYMAPEYALWGY-------LTFKADVYSFGVLVLEIVAGITNSNFMGAGDSVCLLEFANECVESGHLMQVVDERLR----PEVDRKEAEAVIKVALVCSSASPTDRPLMSEVVAMLEGLYPVPES 961          
The following BLAST results are available for this feature:
BLAST of CF504656 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 182
Match NameE-valueIdentityDescription
CX32_ARATH5.899e-1735.37Probable serine/threonine-protein kinase Cx32, chl... [more]
Y1570_ARATH7.704e-1733.92Probable LRR receptor-like serine/threonine-protei... [more]
BAK1_ARATH7.704e-1733.54BRASSINOSTEROID INSENSITIVE 1-associated receptor ... [more]
Y4265_ARATH1.314e-1634.18Probable LRR receptor-like serine/threonine-protei... [more]
SRF7_ARATH1.716e-1631.02Protein STRUBBELIG-RECEPTOR FAMILY 7 OS=Arabidopsi... [more]
SERK2_ARATH2.927e-1631.71Somatic embryogenesis receptor kinase 2 OS=Arabido... [more]
SERK1_ARATH2.927e-1632.32Somatic embryogenesis receptor kinase 1 OS=Arabido... [more]
RLK5_ARATH2.927e-1634.97Receptor-like protein kinase 5 OS=Arabidopsis thal... [more]
Y1105_ARATH4.994e-1636.47Probable receptor-like protein kinase At1g11050 OS... [more]
RKF1_ARATH8.518e-1633.52Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-145 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-1_G12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504656 ID=CF504656; Name=CF504656; organism=Citrus sinensis; type=EST; length=601bp
ACACTATCTCCACACTGGTGCCAAACACACGATTATCCACAGAGATGTTA
AGACTACCAATATTCTTTTGGACGAGAAGTGGGTGGCAAAGGTTTCTGAT
TTTGGTTTGTCAAAAACAGGTCCCACCGTTGGATCACACCTCATGTCAGC
ACTGTTGTGAAGGGTAGTTTTGGCTATTTGGACCCAGAGTACTATCAGGC
GTCAGCAACTAACAGAGAAGTCTGATGTTTATTCTTTTGGTGTCGTGCTC
TTCGAAATCCTGTGTGCTCGACCAGCCTTAAACCCAACTTTGCCCAAGGA
GCAAGTGAGCTTGGCTGAGTGGGCTGCTCATTGTCACAAGAAAGGAATAC
TCGAACAGATTATGGACCCTTATCTCAAGGGAAAGATTGCACCTGAATGC
TTCAAAAAGTTTGCCGAGACAGCAATGAAGTGTGTATCTGATCAAGGTAT
TGAGAGGCCATCAATGGGCGATGTGCTGTGGAACCTAGAGTTCGCTTTGC
AGCTACAAGAGAGTGCAGAGGAAAGCGGCAAAGTTCTTGGCGGAGGAATG
GACATTGAGGAAGGAGCATTTGATGTCGACTGTAAAGGTAAGAAAGATCC
C
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