CF504660
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504660 vs. ExPASy Swiss-Prot
Match: MDHM_HUMAN (Malate dehydrogenase, mitochondrial OS=Homo sapiens GN=MDH2 PE=1 SV=3) HSP 1 Score: 191.43 bits (485), Expect = 2.520e-48 Identity = 95/148 (64.19%), Postives = 118/148 (79.73%), Query Frame = 1 Query: 112 RGYSSESVPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIGNMISNPVNSTVPIAAEGFKKAGTYN 555 R +S+ + + KVAVLGA+GGIGQPL+LL+K +PLVSRL LYDIA+TPGVAAD+ HI T++ V GY+G +QL L+ DVV+IPAGVPRKPGMTRDDLFN NA IV L +A A++CP A+ +I+NPVNST+PI AE FKK G YN Sbjct: 15 RSFSTSAQNNAKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETKAAVKGYLGPEQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPEAMICVIANPVNSTIPITAEVFKKHGVYN 162
BLAST of CF504660 vs. ExPASy Swiss-Prot
Match: MDHP_ARATH (Malate dehydrogenase, chloroplastic OS=Arabidopsis thaliana GN=At3g47520 PE=1 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 2.786e-47 Identity = 95/139 (68.35%), Postives = 111/139 (79.86%), Query Frame = 1 Query: 145 KVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIGNMISNPVNSTVPIAAEGFKKAGTYNEK 561 KVAVLGAAGGIGQPL+LL+K++PLVS L LYDIAN GVAAD+ H NT S+V + G +L L+D +VV+IPAGVPRKPGMTRDDLFNINA IVK L A+A+ CPNA ++ISNPVNSTVPIAAE KK G Y+ K Sbjct: 84 KVAVLGAAGGIGQPLSLLIKMSPLVSTLHLYDIANVKGVAADLSHCNTPSQVRDFTGPSELADCLKDVNVVVIPAGVPRKPGMTRDDLFNINANIVKTLVEAVAENCPNAFIHIISNPVNSTVPIAAEVLKKKGVYDPK 222
BLAST of CF504660 vs. ExPASy Swiss-Prot
Match: MDHM_MACFA (Malate dehydrogenase, mitochondrial OS=Macaca fascicularis GN=MDH2 PE=2 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 6.206e-47 Identity = 94/148 (63.51%), Postives = 117/148 (79.05%), Query Frame = 1 Query: 112 RGYSSESVPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIGNMISNPVNSTVPIAAEGFKKAGTYN 555 R +S+ + + KVAVLGA+GGIGQPL+LL+K +PLVSRL LYDIA+TPGVAAD+ HI T++ V GY+G +QL L+ DVV+IPAGVPRKPGMTRDDLFN NA IV L +A A++ P A+ +I+NPVNST+PI AE FKK G YN Sbjct: 15 RSFSTSAQNNAKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETKAVVKGYLGPEQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLAAACAQHRPEAMICIIANPVNSTIPITAEVFKKHGVYN 162
BLAST of CF504660 vs. ExPASy Swiss-Prot
Match: MDHM_CAEEL (Probable malate dehydrogenase, mitochondrial OS=Caenorhabditis elegans GN=mdh-1 PE=2 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 1.383e-46 Identity = 96/165 (58.18%), Postives = 123/165 (74.55%), Query Frame = 1 Query: 79 PSKPLRSPLEHRGYSSESVPDR----KVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIGNMISNPVNSTVPIAAEGFKKAGTYNEK 561 P+K L + G + SV KVA+LGAAGGIGQPL LL+K +PLV+ LALYD+ NTPGVAAD+ HI++ ++V + G +L A+E++DV++IPAGVPRKPGMTRDDLFN NAGIV+DL + IAK P A+ +I+NPVNSTVPIA+E KKAG Y+ K Sbjct: 4 PAKTLVQAAANSGLRAVSVRHSSQAPKVALLGAAGGIGQPLGLLLKQDPLVAHLALYDVVNTPGVAADLSHIDSNAKVTAHTGPKELYAAVENADVIVIPAGVPRKPGMTRDDLFNTNAGIVRDLAAVIAKASPKALIAIITNPVNSTVPIASEVLKKAGVYDPK 168
BLAST of CF504660 vs. ExPASy Swiss-Prot
Match: MDHM_SCHPO (Malate dehydrogenase, mitochondrial OS=Schizosaccharomyces pombe GN=MDH1 PE=2 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 2.698e-42 Identity = 92/159 (57.86%), Postives = 114/159 (71.70%), Query Frame = 1 Query: 88 PLRSPLEHRGYSSESVPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQ-LGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIGNMISNPVNSTVPIAAEGFKKAGTYNEK 561 PL+S + R +S+ S KVAVLGA GGIGQPL++L+KLN VS LAL+DI PGVAAD+GHINT S V GY +D+ L +AL +DVVIIPAGVPRKPGMTRDDLF NA IV+DL A + CP A +++NPVNSTVPI + ++ G + K Sbjct: 12 PLKS-IAPRSFSTTSSRAFKVAVLGAGGGIGQPLSMLLKLNDKVSELALFDIRGAPGVAADIGHINTTSNVVGYAPDDKGLEKALNGADVVIIPAGVPRKPGMTRDDLFATNASIVRDLAFAAGETCPEAKYLVVTNPVNSTVPIFKKALERVGVHQPK 169
BLAST of CF504660 vs. ExPASy Swiss-Prot
Match: MDHM_YEAST (Malate dehydrogenase, mitochondrial OS=Saccharomyces cerevisiae GN=MDH1 PE=1 SV=2) HSP 1 Score: 164.851 bits (416), Expect = 2.526e-40 Identity = 90/157 (57.32%), Postives = 107/157 (68.15%), Query Frame = 1 Query: 97 SPLEHRGYSSESVPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGN--DQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIGNMISNPVNSTVPIAAEGFKKAGTYNEK 561 S + R +SS KV VLGA GGIGQPL+LL+KLN V+ L LYD+ GVA D+ HI T S V G+ D L AL+D+D+V+IPAGVPRKPGMTRDDLF INA IV+DL +A A+ PNA +ISNPVNSTVPI A+ K G YN K Sbjct: 3 SRVAKRAFSSTVANPYKVTVLGAGGGIGQPLSLLLKLNHKVTDLRLYDLKGAKGVATDLSHIPTNSVVKGFTPEEPDGLNNALKDTDMVLIPAGVPRKPGMTRDDLFAINASIVRDLAAATAESAPNAAILVISNPVNSTVPIVAQVLKNKGVYNPK 159
BLAST of CF504660 vs. ExPASy Swiss-Prot
Match: MDH_PSEHT (Malate dehydrogenase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=mdh PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 3.299e-40 Identity = 87/141 (61.70%), Postives = 106/141 (75.18%), Query Frame = 1 Query: 145 KVAVLGAAGGIGQPLALLMKLN-PLVSRLALYDIANT-PGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIGNMISNPVNSTVPIAAEGFKKAGTYNEK 561 KVAVLGAAGGIGQ L+LL+K P S L+LYD+A PGVA D+ HI T +VAG+ G D L +AL+D+D+V+IPAG+PRKPGM R DLFN+NAGI+K L I CP A+ +I+NPVN TVPI AE FKKAGTY+ K Sbjct: 2 KVAVLGAAGGIGQALSLLLKTGLPAGSELSLYDVAPVVPGVAVDLSHIPTAVKVAGF-GADALNEALKDADIVLIPAGMPRKPGMDRADLFNVNAGIIKTLAEGIVASCPKALVGIITNPVNGTVPIVAEVFKKAGTYDAK 141
BLAST of CF504660 vs. ExPASy Swiss-Prot
Match: MDHP_YEAST (Malate dehydrogenase, peroxisomal OS=Saccharomyces cerevisiae GN=MDH3 PE=1 SV=3) HSP 1 Score: 162.54 bits (410), Expect = 1.253e-39 Identity = 81/136 (59.56%), Postives = 100/136 (73.53%), Query Frame = 1 Query: 145 KVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIGNMISNPVNSTVPIAAEGFKKAGTY 552 KVA+LGA+GG+GQPL+LL+KL+P VS LALYDI G+ D+ HINT S GY D + L ++ VV+IPAGVPRKPG+TRDDLF +NAGIVK L +A+ K+ PNA +ISNPVNS VPIA E KK G + Sbjct: 3 KVAILGASGGVGQPLSLLLKLSPYVSELALYDIRAAEGIGKDLSHINTNSSCVGY-DKDSIENTLSNAQVVLIPAGVPRKPGLTRDDLFKMNAGIVKSLVTAVGKFAPNARILVISNPVNSLVPIAVETLKKMGKF 137
BLAST of CF504660 vs. ExPASy Swiss-Prot
Match: MDH_IDILO (Malate dehydrogenase OS=Idiomarina loihiensis GN=mdh PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 2.792e-39 Identity = 87/141 (61.70%), Postives = 105/141 (74.47%), Query Frame = 1 Query: 145 KVAVLGAAGGIGQPLALLMKLN-PLVSRLALYDIANT-PGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIGNMISNPVNSTVPIAAEGFKKAGTYNEK 561 KVAVLGAAGGIGQ L+LL+K P S L+LYD+A PGVA D+ HI T +V G+ G D L AL SD+V+IPAGVPRKPGM R DLFN+NAGIVK+L +A CPNA +I+NPVN+TVPIAAE KKAG Y+++ Sbjct: 2 KVAVLGAAGGIGQALSLLLKTQLPAGSELSLYDVAPVVPGVAVDLSHIPTDVKVTGF-GKDDLASALVGSDIVLIPAGVPRKPGMDRSDLFNMNAGIVKNLVQGVADNCPNACVGIITNPVNTTVPIAAEVLKKAGCYDKR 141
BLAST of CF504660 vs. ExPASy Swiss-Prot
Match: MDH_HAES2 (Malate dehydrogenase OS=Haemophilus somnus (strain 2336) GN=mdh PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 2.792e-39 Identity = 89/141 (63.12%), Postives = 107/141 (75.89%), Query Frame = 1 Query: 145 KVAVLGAAGGIGQPLALLMKLN-PLVSRLALYDIAN-TPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIGNMISNPVNSTVPIAAEGFKKAGTYNEK 561 K+AVLGAAGGIGQ LALL+KL P S L+LYDIA TPGVAADV HI T ++ G+ G D + ALE++DVV+I AGV RKPGM R DLFNINAGIVK+L +AK CP A +I+NPVN+TV IAAE KKAG Y+++ Sbjct: 2 KIAVLGAAGGIGQALALLLKLQLPAGSELSLYDIAPVTPGVAADVSHIPTAVKIQGFAGEDPI-PALENADVVLISAGVARKPGMDRSDLFNINAGIVKNLIEKVAKTCPKACVGIITNPVNTTVAIAAEVLKKAGVYDKR 141 The following BLAST results are available for this feature:
BLAST of CF504660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 306
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504660 ID=CF504660; Name=CF504660; organism=Citrus sinensis; type=EST; length=562bpback to top |