CF504660
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504660 vs. ExPASy Swiss-Prot
Match: MDH_HAES1 (Malate dehydrogenase OS=Haemophilus somnus (strain 129Pt) GN=mdh PE=3 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 6.221e-39 Identity = 89/141 (63.12%), Postives = 106/141 (75.18%), Query Frame = 1 Query: 145 KVAVLGAAGGIGQPLALLMKLN-PLVSRLALYDIAN-TPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIGNMISNPVNSTVPIAAEGFKKAGTYNEK 561 K+AVLGAAGGIGQ LALL+KL P S L+LYDIA TPGVAADV HI T ++ G+ G D ALE++DVV+I AGV RKPGM R DLFNINAGIVK+L +AK CP A +I+NPVN+TV IAAE KKAG Y+++ Sbjct: 2 KIAVLGAAGGIGQALALLLKLQLPAGSELSLYDIAPVTPGVAADVSHIPTAVKIQGFAGEDPT-PALENADVVLISAGVARKPGMDRSDLFNINAGIVKNLIEKVAKTCPKACVGIITNPVNTTVAIAAEVLKKAGVYDKR 141
BLAST of CF504660 vs. ExPASy Swiss-Prot
Match: MDHM_SCHMA (Malate dehydrogenase, mitochondrial (Fragment) OS=Schistosoma mansoni PE=2 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.061e-38 Identity = 78/133 (58.65%), Postives = 103/133 (77.44%), Query Frame = 1 Query: 163 AAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIGNMISNPVNSTVPIAAEGFKKAGTYNEK 561 A+GGIG+PL+LL+K +PL+S+LALYDIA+ GVAAD+ HI T++ V ++G +L + L ++VVIIPAG+PRKPGMTRDDLFN NA IV +L + AK CP A+ +I+NPVNSTVPIAAE K+ Y+ K Sbjct: 1 ASGGIGEPLSLLLKQSPLISQLALYDIAHVKGVAADLSHIETQAHVTAHLGPGELAECLTGANVVIIPAGLPRKPGMTRDDLFNTNASIVAELIDSCAKNCPKAMICIITNPVNSTVPIAAEILKRHNVYDPK 133
BLAST of CF504660 vs. ExPASy Swiss-Prot
Match: MDH_VIBVU (Malate dehydrogenase OS=Vibrio vulnificus GN=mdh PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 1.386e-38 Identity = 90/141 (63.83%), Postives = 103/141 (73.05%), Query Frame = 1 Query: 145 KVAVLGAAGGIGQPLALLMKLN-PLVSRLALYDIAN-TPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIGNMISNPVNSTVPIAAEGFKKAGTYNEK 561 KVAV+GAAGGIGQ LALL+K P S LALYDIA TPGVAAD+ HI T + GY G D ALE +DVV+I AGV RKPGM R DLFN+NAGIVK L IA CPNA +I+NPVN+TVPIAAE KKAG Y+++ Sbjct: 2 KVAVIGAAGGIGQALALLLKNRLPAGSDLALYDIAPVTPGVAADLSHIPTHVSIKGYAGEDPT-PALEGADVVLISAGVARKPGMDRADLFNVNAGIVKSLAERIAVVCPNACIGIITNPVNTTVPIAAEVLKKAGVYDKR 141
BLAST of CF504660 vs. ExPASy Swiss-Prot
Match: MDH_VIBVY (Malate dehydrogenase OS=Vibrio vulnificus (strain YJ016) GN=mdh PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 2.364e-38 Identity = 90/141 (63.83%), Postives = 103/141 (73.05%), Query Frame = 1 Query: 145 KVAVLGAAGGIGQPLALLMKLN-PLVSRLALYDIAN-TPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIGNMISNPVNSTVPIAAEGFKKAGTYNEK 561 KVAV+GAAGGIGQ LALL+K P S LALYDIA TPGVAAD+ HI T + GY G D ALE +DVV+I AGV RKPGM R DLFN+NAGIVK L IA CPNA +I+NPVN+TVPIAAE KKAG Y+++ Sbjct: 2 KVAVIGAAGGIGQALALLLKNRLPAGSDLALYDIAPVTPGVAADLSHIPTPVSIKGYAGEDPT-PALEGADVVLISAGVARKPGMDRADLFNVNAGIVKSLAERIAVVCPNACIGIITNPVNTTVPIAAEVLKKAGVYDKR 141
BLAST of CF504660 vs. ExPASy Swiss-Prot
Match: MDH_COLP3 (Malate dehydrogenase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=mdh PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 3.087e-38 Identity = 85/139 (61.15%), Postives = 102/139 (73.38%), Query Frame = 1 Query: 145 KVAVLGAAGGIGQPLALLMKLN-PLVSRLALYDIANT-PGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIGNMISNPVNSTVPIAAEGFKKAGTYN 555 KVAVLGAAGGIGQ L+LL+K P S L+LYD+A PGVA D+ HI T +VAG+ G D L AL +D+V+IPAG+PRKPGM R DLFN+NAGI+K L I CP A+ +I+NPVN TVPI AE FKKAGTY+ Sbjct: 2 KVAVLGAAGGIGQALSLLLKTQLPAGSELSLYDVAPVVPGVAVDLSHIPTDVKVAGF-GRDDLNGALTGADIVLIPAGMPRKPGMDRADLFNVNAGIIKVLAEGIVASCPKALVGVITNPVNGTVPIVAEVFKKAGTYD 139
BLAST of CF504660 vs. ExPASy Swiss-Prot
Match: MDH_PROMH (Malate dehydrogenase OS=Proteus mirabilis (strain HI4320) GN=mdh PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 5.266e-38 Identity = 87/141 (61.70%), Postives = 106/141 (75.18%), Query Frame = 1 Query: 145 KVAVLGAAGGIGQPLALLMKLN-PLVSRLALYDIAN-TPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIGNMISNPVNSTVPIAAEGFKKAGTYNEK 561 KVAVLGAAGGIGQ LALL+K P S L+LYDIA TPGVAAD+ HI T+ V G+ G D AL+D+DVV+I AGV RKPGM R DLFN+NAGIV++L +A+ CP A+ +I+NPVN+TV IAAE KKAG Y++K Sbjct: 2 KVAVLGAAGGIGQALALLLKNQLPAGSELSLYDIAPVTPGVAADLSHIPTQVRVKGFAGEDP-SPALKDADVVLISAGVARKPGMDRSDLFNVNAGIVRNLIEKVAQNCPKALIGIITNPVNTTVAIAAEVLKKAGVYDKK 141
BLAST of CF504660 vs. ExPASy Swiss-Prot
Match: MDH_PASMU (Malate dehydrogenase OS=Pasteurella multocida GN=mdh PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 6.878e-38 Identity = 88/141 (62.41%), Postives = 105/141 (74.47%), Query Frame = 1 Query: 145 KVAVLGAAGGIGQPLALLMKLN-PLVSRLALYDIAN-TPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIGNMISNPVNSTVPIAAEGFKKAGTYNEK 561 KVAVLGAAGGIGQ LALL+KL P S L+LYDIA TPGVAADV HI T +V G+ G D AL+ +DVV+I AGV RKPGM R DLFNINAGIV++L +A+ CP A +I+NPVN+TV IAAE KKAG Y+++ Sbjct: 2 KVAVLGAAGGIGQALALLLKLQLPAGSELSLYDIAPVTPGVAADVSHIPTAVKVQGFAGEDPT-PALQGADVVLISAGVARKPGMDRSDLFNINAGIVRNLIEKVAQVCPKACVGIITNPVNTTVAIAAEVLKKAGVYDKR 141
BLAST of CF504660 vs. ExPASy Swiss-Prot
Match: MDH_VIBPA (Malate dehydrogenase OS=Vibrio parahaemolyticus GN=mdh PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 8.983e-38 Identity = 89/141 (63.12%), Postives = 102/141 (72.34%), Query Frame = 1 Query: 145 KVAVLGAAGGIGQPLALLMKLN-PLVSRLALYDIAN-TPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIGNMISNPVNSTVPIAAEGFKKAGTYNEK 561 KVAV+GAAGGIGQ LALL+K P S LALYDIA TPGVAAD+ HI T + GY G D ALE +DVV+I AGV RKPGM R DLFN+NAGIVK L IA CP A +I+NPVN+TVPIAAE KKAG Y+++ Sbjct: 2 KVAVIGAAGGIGQALALLLKNRLPAGSDLALYDIAPVTPGVAADLSHIPTPVSIKGYAGEDPT-PALEGADVVLISAGVARKPGMDRADLFNVNAGIVKSLAEKIAVVCPKACVGIITNPVNTTVPIAAEVLKKAGVYDKR 141
BLAST of CF504660 vs. ExPASy Swiss-Prot
Match: MDH_VIBHB (Malate dehydrogenase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=mdh PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 8.983e-38 Identity = 89/141 (63.12%), Postives = 102/141 (72.34%), Query Frame = 1 Query: 145 KVAVLGAAGGIGQPLALLMKLN-PLVSRLALYDIAN-TPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIGNMISNPVNSTVPIAAEGFKKAGTYNEK 561 KVAV+GAAGGIGQ LALL+K P S LALYDIA TPGVAAD+ HI T + GY G D ALE +DVV+I AGV RKPGM R DLFN+NAGIVK L IA CP A +I+NPVN+TVPIAAE KKAG Y+++ Sbjct: 2 KVAVIGAAGGIGQALALLLKNRLPAGSDLALYDIAPVTPGVAADLSHIPTPVSIKGYAGEDPT-PALEGADVVLISAGVARKPGMDRADLFNVNAGIVKSLAEKIAVVCPTACVGIITNPVNTTVPIAAEVLKKAGVYDKR 141
BLAST of CF504660 vs. ExPASy Swiss-Prot
Match: MDH_VIBSL (Malate dehydrogenase OS=Vibrio splendidus (strain LGP32) GN=mdh PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.173e-37 Identity = 89/141 (63.12%), Postives = 102/141 (72.34%), Query Frame = 1 Query: 145 KVAVLGAAGGIGQPLALLMKLN-PLVSRLALYDIAN-TPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIGNMISNPVNSTVPIAAEGFKKAGTYNEK 561 KVAV+GAAGGIGQ LALL+K P S LALYDIA TPGVAAD+ HI T + GY G D ALE +DVV+I AGV RKPGM R DLFN+NAGIVK L IA CP A +I+NPVN+TVPIAAE KKAG Y+++ Sbjct: 2 KVAVIGAAGGIGQALALLLKNRLPAGSDLALYDIAPVTPGVAADLSHIPTPVSIKGYAGEDPT-PALEGADVVLISAGVARKPGMDRADLFNVNAGIVKSLAEKIAVTCPTACVGIITNPVNTTVPIAAEVLKKAGVYDKR 141 The following BLAST results are available for this feature:
BLAST of CF504660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 306
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504660 ID=CF504660; Name=CF504660; organism=Citrus sinensis; type=EST; length=562bpback to top |