CF504660
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504660 vs. ExPASy Swiss-Prot
Match: MDH_VIBCH (Malate dehydrogenase OS=Vibrio cholerae GN=mdh PE=3 SV=2) HSP 1 Score: 154.836 bits (390), Expect = 2.614e-37 Identity = 88/141 (62.41%), Postives = 102/141 (72.34%), Query Frame = 1 Query: 145 KVAVLGAAGGIGQPLALLMKLN-PLVSRLALYDIAN-TPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIGNMISNPVNSTVPIAAEGFKKAGTYNEK 561 KVAV+GAAGGIGQ LALL+K P S LALYDIA TPGVAAD+ HI T + GY G D ALE +DVV++ AGV RKPGM R DLFN+NAGIVK L IA CP A +I+NPVN+TVPIAAE KKAG Y+++ Sbjct: 2 KVAVIGAAGGIGQALALLLKNRLPAGSDLALYDIAPVTPGVAADLSHIPTPVTIKGYAGEDPT-PALEGADVVLVSAGVARKPGMDRADLFNVNAGIVKALAEKIAVVCPKACVGIITNPVNTTVPIAAEVLKKAGVYDKR 141
BLAST of CF504660 vs. ExPASy Swiss-Prot
Match: MDH_SHEAM (Malate dehydrogenase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=mdh PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 2.614e-37 Identity = 87/140 (62.14%), Postives = 103/140 (73.57%), Query Frame = 1 Query: 145 KVAVLGAAGGIGQPLALLMKLN-PLVSRLALYDIAN-TPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIGNMISNPVNSTVPIAAEGFKKAGTYNE 558 KVAVLGAAGGIGQ LALL+K P S+L+LYDIA TPGVA D+ HI T EV G+ G D ALE +DVV+I AGV RKPGM R DLFNINAGIV++L +A CP A+ +I+NPVN+TV IAAE KKAG Y++ Sbjct: 2 KVAVLGAAGGIGQALALLLKTQLPAGSKLSLYDIAPVTPGVAVDLSHIPTAVEVKGFCGEDPT-PALEGADVVLISAGVARKPGMDRSDLFNINAGIVRNLIEKVAATCPKALVGIITNPVNTTVAIAAEVLKKAGVYDK 140
BLAST of CF504660 vs. ExPASy Swiss-Prot
Match: MDH_SHEDO (Malate dehydrogenase OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=mdh PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 3.414e-37 Identity = 86/140 (61.43%), Postives = 103/140 (73.57%), Query Frame = 1 Query: 145 KVAVLGAAGGIGQPLALLMKLN-PLVSRLALYDIAN-TPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIGNMISNPVNSTVPIAAEGFKKAGTYNE 558 KVAVLGAAGGIGQ LALL+K P S+L+LYDIA TPGVA D+ HI T E+ G+ G D AL D+DVV+I AGV RKPGM R DLFNINAGIV++L +A CP A+ +I+NPVN+TV IAAE KKAG Y++ Sbjct: 2 KVAVLGAAGGIGQALALLLKTQLPAGSKLSLYDIAPVTPGVAVDLSHIPTAVEIKGFAGEDPT-PALVDADVVLISAGVARKPGMDRSDLFNINAGIVRNLMEKVAATCPKALVGIITNPVNTTVAIAAEVMKKAGVYDK 140
BLAST of CF504660 vs. ExPASy Swiss-Prot
Match: MDH_MORJA (Malate dehydrogenase OS=Moritella japonica GN=mdh PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 3.414e-37 Identity = 86/141 (60.99%), Postives = 103/141 (73.05%), Query Frame = 1 Query: 145 KVAVLGAAGGIGQPLALLMKLN-PLVSRLALYDIAN-TPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIGNMISNPVNSTVPIAAEGFKKAGTYNEK 561 KVAVLGAAGGIGQ LALL+K P S L+LYDIA TPGVA D+ HI T +AG+ G D AL +DVV+I AGV RKPGM R DLFNINAGI+K+L A+ CPNA +I+NPVN+TVPIAAE K+AG Y+++ Sbjct: 2 KVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAAVTPGVAVDLSHIPTDVTIAGFAGTDPT-DALVGADVVLISAGVARKPGMDRSDLFNINAGIIKNLAGKCAEVCPNACIGIITNPVNTTVPIAAEVLKQAGVYDKR 141
BLAST of CF504660 vs. ExPASy Swiss-Prot
Match: MDH_HAEPS (Malate dehydrogenase OS=Haemophilus parasuis serovar 5 (strain SH0165) GN=mdh PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 3.414e-37 Identity = 87/141 (61.70%), Postives = 103/141 (73.05%), Query Frame = 1 Query: 145 KVAVLGAAGGIGQPLALLMKLN-PLVSRLALYDIAN-TPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIGNMISNPVNSTVPIAAEGFKKAGTYNEK 561 KVAVLGAAGGIGQ LALL+KL P + LALYDIA TPGVA DV HI T +V GY G D ALE +++V+I AGV RKPGM R DLFNINAGIV++L +A CP A +I+NPVN+TV IAAE KKAG Y+++ Sbjct: 2 KVAVLGAAGGIGQALALLLKLQLPAGTNLALYDIAPVTPGVAVDVSHIPTAVKVVGYAGEDPT-PALEGANLVLISAGVARKPGMDRSDLFNINAGIVRNLIEKVATVCPTACVGIITNPVNTTVAIAAEVLKKAGVYDKR 141
BLAST of CF504660 vs. ExPASy Swiss-Prot
Match: MDH_SHESA (Malate dehydrogenase OS=Shewanella sp. (strain ANA-3) GN=mdh PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 4.458e-37 Identity = 86/140 (61.43%), Postives = 103/140 (73.57%), Query Frame = 1 Query: 145 KVAVLGAAGGIGQPLALLMKLN-PLVSRLALYDIAN-TPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIGNMISNPVNSTVPIAAEGFKKAGTYNE 558 KVAVLGAAGGIGQ LALL+K P S+L+LYDIA TPGVA D+ HI T E+ G+ G D ALE +DVV+I AGV RKPGM R DLFNINAGIV++L +A CP A+ +I+NPVN+TV IAAE KKAG Y++ Sbjct: 2 KVAVLGAAGGIGQALALLLKTQLPAGSKLSLYDIAPVTPGVAVDLSHIPTAVEIKGFAGEDPT-PALEGADVVLISAGVARKPGMDRSDLFNINAGIVRNLIEKVAVTCPKALVGIITNPVNTTVAIAAEVLKKAGVYDK 140
BLAST of CF504660 vs. ExPASy Swiss-Prot
Match: MDH_ALTMD (Malate dehydrogenase OS=Alteromonas macleodii (strain DSM 17117 / Deep ecotype) GN=mdh PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 4.458e-37 Identity = 85/140 (60.71%), Postives = 101/140 (72.14%), Query Frame = 1 Query: 145 KVAVLGAAGGIGQPLALLMKLN-PLVSRLALYDIANT-PGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIGNMISNPVNSTVPIAAEGFKKAGTYNE 558 KVAVLGAAGGIGQ L+LL+K P S LALYD+A PGVA D+ HI T +V G+ G D L AL +DVV+IPAG+PRKPGM R DLFNINAGIVK+L +A CPNA +I+NPVN+TV IAAE K G Y++ Sbjct: 2 KVAVLGAAGGIGQALSLLLKTQLPAGSDLALYDVAPVVPGVAVDLSHIPTAVKVTGH-GKDDLADALTGADVVLIPAGMPRKPGMDRSDLFNINAGIVKNLIEGVADNCPNACVGIITNPVNTTVAIAAETLKAKGVYDK 140
BLAST of CF504660 vs. ExPASy Swiss-Prot
Match: MDH_ACTSZ (Malate dehydrogenase OS=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) GN=mdh PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 4.458e-37 Identity = 81/141 (57.45%), Postives = 108/141 (76.60%), Query Frame = 1 Query: 145 KVAVLGAAGGIGQPLALLMKLN-PLVSRLALYDIAN-TPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIGNMISNPVNSTVPIAAEGFKKAGTYNEK 561 KV +LGA+GGIGQPL+LL+KL+ P S L+LYD+A TPGVA D+ HI T EV G+ G+D +AL+ +D+V+I AGV RKPGMTR DLFN+NAGI+++L +A+ CP A +I+NPVNS +PIAAE KKAG Y+++ Sbjct: 2 KVTLLGASGGIGQPLSLLLKLHLPAESDLSLYDVAPVTPGVAKDISHIPTSVEVEGFGGDDP-SEALKGADIVLICAGVARKPGMTRADLFNVNAGIIQNLVEKVAQVCPQACVCIITNPVNSIIPIAAEVLKKAGVYDKR 141
BLAST of CF504660 vs. ExPASy Swiss-Prot
Match: MDH_PSEA6 (Malate dehydrogenase OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=mdh PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 5.823e-37 Identity = 84/140 (60.00%), Postives = 102/140 (72.86%), Query Frame = 1 Query: 145 KVAVLGAAGGIGQPLALLMKLN-PLVSRLALYDIANT-PGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIGNMISNPVNSTVPIAAEGFKKAGTYNE 558 KVAVLGAAGGIGQ L+LL+K P + LALYD+A PGVA D+ HI T +V G+ G D L +AL SD+V+IPAGVPRKPGM R DLFNINAGIV++L ++A CP A +I+NPVN+TV IAAE K G YN+ Sbjct: 2 KVAVLGAAGGIGQALSLLLKTQLPAGTELALYDVAPVVPGVAVDLSHIPTDVKVEGF-GKDDLAKALTGSDIVLIPAGVPRKPGMDRSDLFNINAGIVRNLVDSVADNCPEACLCIITNPVNTTVAIAAEALKAKGVYNK 140
BLAST of CF504660 vs. ExPASy Swiss-Prot
Match: MDH_ECOLC (Malate dehydrogenase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=mdh PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 5.823e-37 Identity = 86/140 (61.43%), Postives = 102/140 (72.86%), Query Frame = 1 Query: 145 KVAVLGAAGGIGQPLALLMKLN-PLVSRLALYDIAN-TPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIGNMISNPVNSTVPIAAEGFKKAGTYNE 558 KVAVLGAAGGIGQ LALL+K P S L+LYDIA TPGVA D+ HI T ++ G+ G D ALE +DVV+I AGV RKPGM R DLFN+NAGIVK+L +AK CP A +I+NPVN+TV IAAE KKAG Y++ Sbjct: 2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDATS-ALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITNPVNTTVAIAAEVLKKAGVYDK 140 The following BLAST results are available for this feature:
BLAST of CF504660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 306
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504660 ID=CF504660; Name=CF504660; organism=Citrus sinensis; type=EST; length=562bpback to top |