CF504660
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504660 vs. ExPASy Swiss-Prot
Match: MDH_SALPC (Malate dehydrogenase OS=Salmonella paratyphi C (strain RKS4594) GN=mdh PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 7.605e-37 Identity = 87/140 (62.14%), Postives = 102/140 (72.86%), Query Frame = 1 Query: 145 KVAVLGAAGGIGQPLALLMKLN-PLVSRLALYDIAN-TPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIGNMISNPVNSTVPIAAEGFKKAGTYNE 558 KVAVLGAAGGIGQ LALL+K P S L+LYDIA TPGVA D+ HI T ++ G+ G D ALE +DVV+I AGV RKPGM R DLFN+NAGIVK+L IAK CP A +I+NPVN+TV IAAE KKAG Y++ Sbjct: 2 KVAVLGAAGGIGQALALLLKNQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDAT-PALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQIAKTCPKACVGIITNPVNTTVAIAAEVLKKAGVYDK 140
BLAST of CF504660 vs. ExPASy Swiss-Prot
Match: MDH_SALPB (Malate dehydrogenase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=mdh PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 7.605e-37 Identity = 87/140 (62.14%), Postives = 102/140 (72.86%), Query Frame = 1 Query: 145 KVAVLGAAGGIGQPLALLMKLN-PLVSRLALYDIAN-TPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIGNMISNPVNSTVPIAAEGFKKAGTYNE 558 KVAVLGAAGGIGQ LALL+K P S L+LYDIA TPGVA D+ HI T ++ G+ G D ALE +DVV+I AGV RKPGM R DLFN+NAGIVK+L IAK CP A +I+NPVN+TV IAAE KKAG Y++ Sbjct: 2 KVAVLGAAGGIGQALALLLKNQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDAT-PALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQIAKTCPKACVGIITNPVNTTVAIAAEVLKKAGVYDK 140
BLAST of CF504660 vs. ExPASy Swiss-Prot
Match: MDH_SALPA (Malate dehydrogenase OS=Salmonella paratyphi A GN=mdh PE=3 SV=2) HSP 1 Score: 153.295 bits (386), Expect = 7.605e-37 Identity = 87/140 (62.14%), Postives = 102/140 (72.86%), Query Frame = 1 Query: 145 KVAVLGAAGGIGQPLALLMKLN-PLVSRLALYDIAN-TPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIGNMISNPVNSTVPIAAEGFKKAGTYNE 558 KVAVLGAAGGIGQ LALL+K P S L+LYDIA TPGVA D+ HI T ++ G+ G D ALE +DVV+I AGV RKPGM R DLFN+NAGIVK+L IAK CP A +I+NPVN+TV IAAE KKAG Y++ Sbjct: 2 KVAVLGAAGGIGQALALLLKNQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDAT-PALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQIAKTCPKACVGIITNPVNTTVAIAAEVLKKAGVYDK 140
BLAST of CF504660 vs. ExPASy Swiss-Prot
Match: MDH_SALNS (Malate dehydrogenase OS=Salmonella newport (strain SL254) GN=mdh PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 7.605e-37 Identity = 87/140 (62.14%), Postives = 102/140 (72.86%), Query Frame = 1 Query: 145 KVAVLGAAGGIGQPLALLMKLN-PLVSRLALYDIAN-TPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIGNMISNPVNSTVPIAAEGFKKAGTYNE 558 KVAVLGAAGGIGQ LALL+K P S L+LYDIA TPGVA D+ HI T ++ G+ G D ALE +DVV+I AGV RKPGM R DLFN+NAGIVK+L IAK CP A +I+NPVN+TV IAAE KKAG Y++ Sbjct: 2 KVAVLGAAGGIGQALALLLKNQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDAT-PALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQIAKTCPKACVGIITNPVNTTVAIAAEVLKKAGVYDK 140
BLAST of CF504660 vs. ExPASy Swiss-Prot
Match: MDH_SALHS (Malate dehydrogenase OS=Salmonella heidelberg (strain SL476) GN=mdh PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 7.605e-37 Identity = 87/140 (62.14%), Postives = 102/140 (72.86%), Query Frame = 1 Query: 145 KVAVLGAAGGIGQPLALLMKLN-PLVSRLALYDIAN-TPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIGNMISNPVNSTVPIAAEGFKKAGTYNE 558 KVAVLGAAGGIGQ LALL+K P S L+LYDIA TPGVA D+ HI T ++ G+ G D ALE +DVV+I AGV RKPGM R DLFN+NAGIVK+L IAK CP A +I+NPVN+TV IAAE KKAG Y++ Sbjct: 2 KVAVLGAAGGIGQALALLLKNQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDAT-PALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQIAKTCPKACVGIITNPVNTTVAIAAEVLKKAGVYDK 140
BLAST of CF504660 vs. ExPASy Swiss-Prot
Match: MDH_SALG2 (Malate dehydrogenase OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=mdh PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 7.605e-37 Identity = 87/140 (62.14%), Postives = 102/140 (72.86%), Query Frame = 1 Query: 145 KVAVLGAAGGIGQPLALLMKLN-PLVSRLALYDIAN-TPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIGNMISNPVNSTVPIAAEGFKKAGTYNE 558 KVAVLGAAGGIGQ LALL+K P S L+LYDIA TPGVA D+ HI T ++ G+ G D ALE +DVV+I AGV RKPGM R DLFN+NAGIVK+L IAK CP A +I+NPVN+TV IAAE KKAG Y++ Sbjct: 2 KVAVLGAAGGIGQALALLLKNQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDAT-PALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQIAKTCPKACVGIITNPVNTTVAIAAEVLKKAGVYDK 140
BLAST of CF504660 vs. ExPASy Swiss-Prot
Match: MDH_SALEP (Malate dehydrogenase OS=Salmonella enteritidis PT4 (strain P125109) GN=mdh PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 7.605e-37 Identity = 87/140 (62.14%), Postives = 102/140 (72.86%), Query Frame = 1 Query: 145 KVAVLGAAGGIGQPLALLMKLN-PLVSRLALYDIAN-TPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIGNMISNPVNSTVPIAAEGFKKAGTYNE 558 KVAVLGAAGGIGQ LALL+K P S L+LYDIA TPGVA D+ HI T ++ G+ G D ALE +DVV+I AGV RKPGM R DLFN+NAGIVK+L IAK CP A +I+NPVN+TV IAAE KKAG Y++ Sbjct: 2 KVAVLGAAGGIGQALALLLKNQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDAT-PALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQIAKTCPKACVGIITNPVNTTVAIAAEVLKKAGVYDK 140
BLAST of CF504660 vs. ExPASy Swiss-Prot
Match: MDH_SALCH (Malate dehydrogenase OS=Salmonella choleraesuis GN=mdh PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 7.605e-37 Identity = 87/140 (62.14%), Postives = 102/140 (72.86%), Query Frame = 1 Query: 145 KVAVLGAAGGIGQPLALLMKLN-PLVSRLALYDIAN-TPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIGNMISNPVNSTVPIAAEGFKKAGTYNE 558 KVAVLGAAGGIGQ LALL+K P S L+LYDIA TPGVA D+ HI T ++ G+ G D ALE +DVV+I AGV RKPGM R DLFN+NAGIVK+L IAK CP A +I+NPVN+TV IAAE KKAG Y++ Sbjct: 2 KVAVLGAAGGIGQALALLLKNQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDAT-PALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQIAKTCPKACVGIITNPVNTTVAIAAEVLKKAGVYDK 140
BLAST of CF504660 vs. ExPASy Swiss-Prot
Match: MDH_SALAR (Malate dehydrogenase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=mdh PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 7.605e-37 Identity = 87/140 (62.14%), Postives = 102/140 (72.86%), Query Frame = 1 Query: 145 KVAVLGAAGGIGQPLALLMKLN-PLVSRLALYDIAN-TPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIGNMISNPVNSTVPIAAEGFKKAGTYNE 558 KVAVLGAAGGIGQ LALL+K P S L+LYDIA TPGVA D+ HI T ++ G+ G D ALE +DVV+I AGV RKPGM R DLFN+NAGIVK+L IAK CP A +I+NPVN+TV IAAE KKAG Y++ Sbjct: 2 KVAVLGAAGGIGQALALLLKNQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDAT-PALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQIAKTCPKACVGIITNPVNTTVAIAAEVLKKAGVYDK 140
BLAST of CF504660 vs. ExPASy Swiss-Prot
Match: MDH_SALA4 (Malate dehydrogenase OS=Salmonella agona (strain SL483) GN=mdh PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 7.605e-37 Identity = 87/140 (62.14%), Postives = 102/140 (72.86%), Query Frame = 1 Query: 145 KVAVLGAAGGIGQPLALLMKLN-PLVSRLALYDIAN-TPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIGNMISNPVNSTVPIAAEGFKKAGTYNE 558 KVAVLGAAGGIGQ LALL+K P S L+LYDIA TPGVA D+ HI T ++ G+ G D ALE +DVV+I AGV RKPGM R DLFN+NAGIVK+L IAK CP A +I+NPVN+TV IAAE KKAG Y++ Sbjct: 2 KVAVLGAAGGIGQALALLLKNQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDAT-PALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQIAKTCPKACVGIITNPVNTTVAIAAEVLKKAGVYDK 140 The following BLAST results are available for this feature:
BLAST of CF504660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 306
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504660 ID=CF504660; Name=CF504660; organism=Citrus sinensis; type=EST; length=562bpback to top |