CF504661
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504661 vs. ExPASy Swiss-Prot
Match: TPIC_SECCE (Triosephosphate isomerase, chloroplastic OS=Secale cereale PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.156e-19 Identity = 34/53 (64.15%), Postives = 40/53 (75.47%), Query Frame = 3 Query: 93 FLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERR 251 ++ VKSSL V+AQN W+ KGGAFTGEISAE LV++ WVILGHSERR Sbjct: 90 YIDQVKSSLTDRIEVSAQNTWIGKGGAFTGEISAEQLVDIGCQWVILGHSERR 142 HSP 2 Score: 43.1282 bits (100), Expect = 6.156e-19 Identity = 18/29 (62.07%), Postives = 24/29 (82.76%), Query Frame = 1 Query: 256 ILNELNEFVGDKGAYALSQGLKVIACVGE 342 ++ E +EF+G K AYALSQ LKV+AC+GE Sbjct: 144 VIGEDDEFIGKKAAYALSQNLKVMACIGE 172
BLAST of CF504661 vs. ExPASy Swiss-Prot
Match: TPIC_ARATH (Triosephosphate isomerase, chloroplastic OS=Arabidopsis thaliana GN=TIM PE=1 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 1.436e-17 Identity = 32/53 (60.38%), Postives = 37/53 (69.81%), Query Frame = 3 Query: 93 FLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERR 251 ++ VKSSL ++ QN WV KGGAFTGEIS E L +L WVILGHSERR Sbjct: 107 YIDQVKSSLTDRIDISGQNSWVGKGGAFTGEISVEQLKDLGCKWVILGHSERR 159 HSP 2 Score: 43.5134 bits (101), Expect = 1.436e-17 Identity = 18/29 (62.07%), Postives = 24/29 (82.76%), Query Frame = 1 Query: 256 ILNELNEFVGDKGAYALSQGLKVIACVGE 342 ++ E +EF+G K AYALS+GL VIAC+GE Sbjct: 161 VIGEKDEFIGKKAAYALSEGLGVIACIGE 189
BLAST of CF504661 vs. ExPASy Swiss-Prot
Match: TPIC_FRAAN (Triosephosphate isomerase, chloroplastic OS=Fragaria ananassa GN=TPI PE=2 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 1.172e-16 Identity = 32/53 (60.38%), Postives = 37/53 (69.81%), Query Frame = 3 Query: 93 FLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERR 251 +L VKSSL ++ QN WV KGGAFTGEIS E L ++ WVILGHSERR Sbjct: 106 YLDQVKSSLTDRIEISGQNSWVAKGGAFTGEISVEQLKDIGRKWVILGHSERR 158 HSP 2 Score: 40.4318 bits (93), Expect = 1.172e-16 Identity = 16/29 (55.17%), Postives = 24/29 (82.76%), Query Frame = 1 Query: 256 ILNELNEFVGDKGAYALSQGLKVIACVGE 342 ++ E ++F+G K AYAL++GL VIAC+GE Sbjct: 160 VIGEDDQFIGKKAAYALNEGLGVIACIGE 188
BLAST of CF504661 vs. ExPASy Swiss-Prot
Match: TPIS_AEDTO (Triosephosphate isomerase (Fragment) OS=Aedes togoi GN=Tpi PE=3 SV=1) HSP 1 Score: 63.1586 bits (152), Expect = 1.635e-15 Identity = 33/56 (58.93%), Postives = 37/56 (66.07%), Query Frame = 3 Query: 93 FLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRPYF 260 +L L +S L VAAQNC+ GAFTGEIS ML +L I WVILGHSERR F Sbjct: 28 YLTLARSQLPDSVGVAAQNCYKVAKGAFTGEISPAMLKDLNIGWVILGHSERRAIF 83 HSP 2 Score: 39.6614 bits (91), Expect = 1.635e-15 Identity = 17/29 (58.62%), Postives = 23/29 (79.31%), Query Frame = 1 Query: 256 ILNELNEFVGDKGAYALSQGLKVIACVGE 342 I E +E + DK A+AL++GLKVIAC+GE Sbjct: 82 IFGESDELIADKVAHALAEGLKVIACIGE 110
BLAST of CF504661 vs. ExPASy Swiss-Prot
Match: TPIS_CULTA (Triosephosphate isomerase OS=Culex tarsalis GN=Tpi PE=1 SV=2) HSP 1 Score: 62.7734 bits (151), Expect = 2.112e-15 Identity = 33/56 (58.93%), Postives = 37/56 (66.07%), Query Frame = 3 Query: 93 FLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRPYF 260 +L L +S L VAAQNC+ GAFTGEIS ML +L I WVILGHSERR F Sbjct: 46 YLTLARSQLPDSVCVAAQNCYKVPKGAFTGEISPAMLKDLNIGWVILGHSERRAIF 101 HSP 2 Score: 39.6614 bits (91), Expect = 2.112e-15 Identity = 17/29 (58.62%), Postives = 23/29 (79.31%), Query Frame = 1 Query: 256 ILNELNEFVGDKGAYALSQGLKVIACVGE 342 I E +E + DK A+AL++GLKVIAC+GE Sbjct: 100 IFGESDELIADKVAHALAEGLKVIACIGE 128
BLAST of CF504661 vs. ExPASy Swiss-Prot
Match: TPIS_BOMMO (Triosephosphate isomerase OS=Bombyx mori GN=Tpi PE=1 SV=2) HSP 1 Score: 63.929 bits (154), Expect = 4.633e-15 Identity = 30/56 (53.57%), Postives = 37/56 (66.07%), Query Frame = 3 Query: 93 FLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRPYF 260 +L VK+ + VAAQNCW GAFTGEIS M+ ++ + WVILGHSERR F Sbjct: 46 YLSYVKTIIPDNVEVAAQNCWKSPKGAFTGEISPAMIKDVGVNWVILGHSERRTIF 101 HSP 2 Score: 37.3502 bits (85), Expect = 4.633e-15 Identity = 17/29 (58.62%), Postives = 21/29 (72.41%), Query Frame = 1 Query: 256 ILNELNEFVGDKGAYALSQGLKVIACVGE 342 I E +E V +K A+AL GLKVIAC+GE Sbjct: 100 IFGEKDELVAEKVAHALESGLKVIACIGE 128
BLAST of CF504661 vs. ExPASy Swiss-Prot
Match: TPIS_CULPI (Triosephosphate isomerase (Fragment) OS=Culex pipiens GN=Tpi PE=3 SV=1) HSP 1 Score: 63.1586 bits (152), Expect = 7.878e-15 Identity = 33/56 (58.93%), Postives = 37/56 (66.07%), Query Frame = 3 Query: 93 FLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRPYF 260 +L L +S L VAAQNC+ GAFTGEIS ML +L I WVILGHSERR F Sbjct: 28 YLSLARSQLPDTVGVAAQNCYKVAKGAFTGEISPAMLKDLNIGWVILGHSERRAIF 83 HSP 2 Score: 37.3502 bits (85), Expect = 7.878e-15 Identity = 16/29 (55.17%), Postives = 21/29 (72.41%), Query Frame = 1 Query: 256 ILNELNEFVGDKGAYALSQGLKVIACVGE 342 I E E + DK +AL++GLKVIAC+GE Sbjct: 82 IFGESGELIADKIVHALAEGLKVIACIGE 110
BLAST of CF504661 vs. ExPASy Swiss-Prot
Match: TPIS_SCHJA (Triosephosphate isomerase OS=Schistosoma japonicum GN=TPI PE=2 SV=1) HSP 1 Score: 62.7734 bits (151), Expect = 1.716e-14 Identity = 31/56 (55.36%), Postives = 37/56 (66.07%), Query Frame = 3 Query: 93 FLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRPYF 260 +L V+ SL HVAAQNC+ GAFTGEIS M+ ++ WVILGHSERR F Sbjct: 48 YLNEVRQSLAKEIHVAAQNCYKVPKGAFTGEISPSMIKDVGCDWVILGHSERRSIF 103 HSP 2 Score: 36.5798 bits (83), Expect = 1.716e-14 Identity = 15/29 (51.72%), Postives = 22/29 (75.86%), Query Frame = 1 Query: 256 ILNELNEFVGDKGAYALSQGLKVIACVGE 342 I NE +E V +K +AL++GL V+AC+GE Sbjct: 102 IFNESDELVAEKVQHALAEGLSVVACIGE 130
BLAST of CF504661 vs. ExPASy Swiss-Prot
Match: TPIS_ANOME (Triosephosphate isomerase (Fragment) OS=Anopheles merus GN=Tpi PE=3 SV=1) HSP 1 Score: 61.2326 bits (147), Expect = 1.729e-14 Identity = 32/56 (57.14%), Postives = 37/56 (66.07%), Query Frame = 3 Query: 93 FLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRPYF 260 +L L +S L VAAQNC+ GAFTGEIS ML +L + WVILGHSERR F Sbjct: 28 YLSLARSLLPETIGVAAQNCYKVAKGAFTGEISPAMLKDLGLGWVILGHSERRAIF 83 HSP 2 Score: 38.1206 bits (87), Expect = 1.729e-14 Identity = 16/29 (55.17%), Postives = 22/29 (75.86%), Query Frame = 1 Query: 256 ILNELNEFVGDKGAYALSQGLKVIACVGE 342 I E +E + +K A+AL +GLKVIAC+GE Sbjct: 82 IFGETDELIAEKVAHALGEGLKVIACIGE 110
BLAST of CF504661 vs. ExPASy Swiss-Prot
Match: TPIS_NEUCR (Triosephosphate isomerase OS=Neurospora crassa GN=tpi-1 PE=3 SV=1) HSP 1 Score: 62.003 bits (149), Expect = 6.696e-13 Identity = 32/54 (59.26%), Postives = 39/54 (72.22%), Query Frame = 3 Query: 93 FLGLVKSSL-RPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERR 251 +L VK +L +P VAAQN + K GAFTGEISA L++L + WVILGHSERR Sbjct: 46 YLDFVKQNLQKPNVEVAAQNVFNKPNGAFTGEISATQLLDLGVKWVILGHSERR 99 HSP 2 Score: 31.9574 bits (71), Expect = 6.696e-13 Identity = 14/28 (50.00%), Postives = 17/28 (60.71%), Query Frame = 1 Query: 259 LNELNEFVGDKGAYALSQGLKVIACVGE 342 L E +EF+ K YAL G+ VI C GE Sbjct: 102 LGESDEFIASKTKYALDNGISVIWCCGE 129 The following BLAST results are available for this feature:
BLAST of CF504661 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504661 ID=CF504661; Name=CF504661; organism=Citrus sinensis; type=EST; length=343bpback to top |