CF504668

Overview
NameCF504668
Unique NameCF504668
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length185
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504668 vs. ExPASy Swiss-Prot
Match: ACON_DEIRA (Aconitate hydratase OS=Deinococcus radiodurans GN=acn PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 2.361e-17
Identity = 39/61 (63.93%), Postives = 50/61 (81.97%), Query Frame = 3
Query:    3 GVVGKFVEFHGDGMGELSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRSDETVAM 185
            GVVGKFVEF+G G+  ++L DRATIANM+PEYGATMGFFPVD   L+YL+ TGR ++ + +
Sbjct:  280 GVVGKFVEFYGAGLSNMTLPDRATIANMAPEYGATMGFFPVDDEALRYLRRTGRLEDEIGL 340          
BLAST of CF504668 vs. ExPASy Swiss-Prot
Match: ACON_RICBR (Aconitate hydratase OS=Rickettsia bellii (strain RML369-C) GN=acnA PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 4.028e-17
Identity = 37/60 (61.67%), Postives = 51/60 (85.00%), Query Frame = 3
Query:    6 VVGKFVEFHGDGMGELSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRSDETVAM 185
            VVGKFVEF+G+G+  +++ADRATI+NM+PEYGAT GFFP+D  T++YL+LTGR  E + +
Sbjct:  272 VVGKFVEFYGEGLKAMTIADRATISNMAPEYGATCGFFPIDQETIKYLELTGRDKEQIKL 331          
BLAST of CF504668 vs. ExPASy Swiss-Prot
Match: ACON_CORJK (Aconitate hydratase OS=Corynebacterium jeikeium (strain K411) GN=acn PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 5.261e-17
Identity = 39/59 (66.10%), Postives = 49/59 (83.05%), Query Frame = 3
Query:    3 GVVGKFVEFHGDGMGELSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRSDETV 179
            GVVGKFVEF+G G+GEL LA+RATI NMSPE+G+T   FP+D  T++YL+LTGR  ET+
Sbjct:  272 GVVGKFVEFYGKGVGELPLANRATIGNMSPEFGSTAAMFPIDEETVKYLELTGRDQETL 330          
BLAST of CF504668 vs. ExPASy Swiss-Prot
Match: ACOC_DICDI (Probable cytoplasmic aconitate hydratase OS=Dictyostelium discoideum GN=aco1 PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 6.871e-17
Identity = 39/59 (66.10%), Postives = 48/59 (81.36%), Query Frame = 3
Query:    3 GVVGKFVEFHGDGMGELSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRSDETV 179
            GVVGKFVEF+G+G+  LS+ DRATI+NM+PEYGATMGFFP D  T+ YL  TGRS+  +
Sbjct:  274 GVVGKFVEFYGEGVSTLSVQDRATISNMAPEYGATMGFFPADENTIDYLASTGRSNTKI 332          
BLAST of CF504668 vs. ExPASy Swiss-Prot
Match: ACOC_BOVIN (Cytoplasmic aconitate hydratase OS=Bos taurus GN=ACO1 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 6.871e-17
Identity = 41/59 (69.49%), Postives = 47/59 (79.66%), Query Frame = 3
Query:    3 GVVGKFVEFHGDGMGELSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRSDETV 179
            GVVGKFVEF G G+ +LS+ADRATIANM PEYGAT  FFPVD V+++YL  TGR  E V
Sbjct:  272 GVVGKFVEFFGPGVAQLSIADRATIANMCPEYGATAAFFPVDEVSIKYLVQTGRDKEKV 330          
BLAST of CF504668 vs. ExPASy Swiss-Prot
Match: ACON_RICFE (Aconitate hydratase OS=Rickettsia felis GN=acnA PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 8.973e-17
Identity = 38/60 (63.33%), Postives = 49/60 (81.67%), Query Frame = 3
Query:    6 VVGKFVEFHGDGMGELSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRSDETVAM 185
            VVGKFVEF G+G+  L++ADRATI+NMSPEYGAT GFFP+D  T++YL+LTGR    + +
Sbjct:  273 VVGKFVEFFGEGLKNLTIADRATISNMSPEYGATCGFFPIDQETIKYLELTGREKTQIKL 332          
BLAST of CF504668 vs. ExPASy Swiss-Prot
Match: ACON_FRATH (Aconitate hydratase OS=Francisella tularensis subsp. holarctica (strain LVS) GN=acn PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.172e-16
Identity = 39/56 (69.64%), Postives = 47/56 (83.93%), Query Frame = 3
Query:    3 GVVGKFVEFHGDGMGELSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRSD 170
            GVVGKFVE++G+G+  LSL DRATIANM+PEYGAT+GFFPVD VTL +   T RS+
Sbjct:  279 GVVGKFVEYYGEGLESLSLPDRATIANMTPEYGATIGFFPVDEVTLDFFNNTNRSE 334          
BLAST of CF504668 vs. ExPASy Swiss-Prot
Match: ACON_BRAJA (Aconitate hydratase OS=Bradyrhizobium japonicum GN=acnA PE=3 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 1.172e-16
Identity = 40/61 (65.57%), Postives = 48/61 (78.69%), Query Frame = 3
Query:    3 GVVGKFVEFHGDGMGELSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRSDETVAM 185
            GVVGKFVEF G G+  LS+AD+ATIANM+PEYGAT GFFPVD   + YLK +GR+   VA+
Sbjct:  288 GVVGKFVEFFGPGLDHLSVADKATIANMAPEYGATCGFFPVDAAAIDYLKTSGRAAPRVAL 348          
BLAST of CF504668 vs. ExPASy Swiss-Prot
Match: ACOC_MOUSE (Cytoplasmic aconitate hydratase OS=Mus musculus GN=Aco1 PE=1 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 1.172e-16
Identity = 40/59 (67.80%), Postives = 47/59 (79.66%), Query Frame = 3
Query:    3 GVVGKFVEFHGDGMGELSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRSDETV 179
            GVVGKFVEF G G+ +LS+ADRATIANM PEYGAT  FFPVD V++ YL  TGR ++ V
Sbjct:  272 GVVGKFVEFFGPGVAQLSIADRATIANMCPEYGATAAFFPVDEVSIAYLLQTGREEDKV 330          
BLAST of CF504668 vs. ExPASy Swiss-Prot
Match: ACOC_HUMAN (Cytoplasmic aconitate hydratase OS=Homo sapiens GN=ACO1 PE=1 SV=3)

HSP 1 Score: 85.1149 bits (209), Expect = 1.172e-16
Identity = 40/57 (70.18%), Postives = 46/57 (80.70%), Query Frame = 3
Query:    3 GVVGKFVEFHGDGMGELSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRSDE 173
            GVVGKFVEF G G+ +LS+ADRATIANM PEYGAT  FFPVD V++ YL  TGR +E
Sbjct:  272 GVVGKFVEFFGPGVAQLSIADRATIANMCPEYGATAAFFPVDEVSITYLVQTGRDEE 328          
The following BLAST results are available for this feature:
BLAST of CF504668 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 48
Match NameE-valueIdentityDescription
ACON_DEIRA2.361e-1763.93Aconitate hydratase OS=Deinococcus radiodurans GN=... [more]
ACON_RICBR4.028e-1761.67Aconitate hydratase OS=Rickettsia bellii (strain R... [more]
ACON_CORJK5.261e-1766.10Aconitate hydratase OS=Corynebacterium jeikeium (s... [more]
ACOC_DICDI6.871e-1766.10Probable cytoplasmic aconitate hydratase OS=Dictyo... [more]
ACOC_BOVIN6.871e-1769.49Cytoplasmic aconitate hydratase OS=Bos taurus GN=A... [more]
ACON_RICFE8.973e-1763.33Aconitate hydratase OS=Rickettsia felis GN=acnA PE... [more]
ACON_FRATH1.172e-1669.64Aconitate hydratase OS=Francisella tularensis subs... [more]
ACON_BRAJA1.172e-1665.57Aconitate hydratase OS=Bradyrhizobium japonicum GN... [more]
ACOC_MOUSE1.172e-1667.80Cytoplasmic aconitate hydratase OS=Mus musculus GN... [more]
ACOC_HUMAN1.172e-1670.18Cytoplasmic aconitate hydratase OS=Homo sapiens GN... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-157 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-20_A02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504668 ID=CF504668; Name=CF504668; organism=Citrus sinensis; type=EST; length=185bp
ATGGTGTTGTTGGAAAATTTGTTGAGTTCCATGGGGATGGTATGGGTGAA
CTTTCACTTGCTGACAGAGCTACCATTGCTAATATGTCTCCCGAGTATGG
AGCAACCATGGGGTTCTTTCCTGTGGATCATGTTACTTTACAATATCTCA
AATTGACTGGAAGGAGTGATGAGACAGTGGCAATG
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