CF504668

Overview
NameCF504668
Unique NameCF504668
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length185
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504668 vs. ExPASy Swiss-Prot
Match: ACON_RICCN (Aconitate hydratase OS=Rickettsia conorii GN=acnA PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.531e-16
Identity = 38/60 (63.33%), Postives = 48/60 (80.00%), Query Frame = 3
Query:    6 VVGKFVEFHGDGMGELSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRSDETVAM 185
            VVGKFVEF G+G+  L +ADRATI+NMSPEYGAT GFFP+D  T++YL+LTGR    + +
Sbjct:  273 VVGKFVEFFGEGLKNLMIADRATISNMSPEYGATCGFFPIDQETIKYLELTGREKTQIRL 332          
BLAST of CF504668 vs. ExPASy Swiss-Prot
Match: ACOC_RAT (Cytoplasmic aconitate hydratase OS=Rattus norvegicus GN=Aco1 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.531e-16
Identity = 40/59 (67.80%), Postives = 47/59 (79.66%), Query Frame = 3
Query:    3 GVVGKFVEFHGDGMGELSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRSDETV 179
            GVVGKFVEF G G+ +LS+ADRATIANM PEYGAT  FFPVD V++ YL  TGR ++ V
Sbjct:  272 GVVGKFVEFFGPGVAQLSIADRATIANMCPEYGATAAFFPVDDVSIAYLVQTGREEDKV 330          
BLAST of CF504668 vs. ExPASy Swiss-Prot
Match: ACOC_CAEEL (Probable cytoplasmic aconitate hydratase OS=Caenorhabditis elegans GN=aco-1 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.999e-16
Identity = 40/57 (70.18%), Postives = 45/57 (78.95%), Query Frame = 3
Query:    3 GVVGKFVEFHGDGMGELSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRSDE 173
            GVVGKFVEF G G+  LS+ADRATIANM PEYGAT+GFFPVD  T+ YL  TGR  +
Sbjct:  271 GVVGKFVEFFGTGVASLSIADRATIANMCPEYGATIGFFPVDSRTIDYLTQTGRDTD 327          
BLAST of CF504668 vs. ExPASy Swiss-Prot
Match: ACON_MYCAV (Aconitate hydratase OS=Mycobacterium avium GN=acn PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 2.611e-16
Identity = 37/61 (60.66%), Postives = 49/61 (80.33%), Query Frame = 3
Query:    3 GVVGKFVEFHGDGMGELSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRSDETVAM 185
            GVVGKFVEF+G+G+ E+ LA+RAT+ NMSPE+G+T   FP+D  T+ YLK TGR+ E VA+
Sbjct:  298 GVVGKFVEFYGEGVAEVPLANRATLGNMSPEFGSTAAIFPIDQETIDYLKFTGRNAEQVAL 358          
BLAST of CF504668 vs. ExPASy Swiss-Prot
Match: ACON_RICPR (Aconitate hydratase OS=Rickettsia prowazekii GN=acnA PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 4.453e-16
Identity = 37/53 (69.81%), Postives = 47/53 (88.68%), Query Frame = 3
Query:    6 VVGKFVEFHGDGMGELSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGR 164
            VVGKFVEF G+G+  L+++DRATI+NMSPEYGAT GFFP+D  TL+YL++TGR
Sbjct:  273 VVGKFVEFFGNGLRNLTISDRATISNMSPEYGATCGFFPIDQETLKYLEVTGR 325          
BLAST of CF504668 vs. ExPASy Swiss-Prot
Match: ACOC_RABIT (Cytoplasmic aconitate hydratase OS=Oryctolagus cuniculus GN=ACO1 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 4.453e-16
Identity = 40/59 (67.80%), Postives = 47/59 (79.66%), Query Frame = 3
Query:    3 GVVGKFVEFHGDGMGELSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRSDETV 179
            GVVGKFVEF G G+ +LS+ADRATIANM PEYGAT  FFPVD V+++YL  TGR +  V
Sbjct:  272 GVVGKFVEFFGLGVAQLSIADRATIANMCPEYGATATFFPVDEVSIKYLVQTGRDESKV 330          
BLAST of CF504668 vs. ExPASy Swiss-Prot
Match: ACON_RICTY (Aconitate hydratase OS=Rickettsia typhi GN=acnA PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 5.816e-16
Identity = 36/60 (60.00%), Postives = 48/60 (80.00%), Query Frame = 3
Query:    6 VVGKFVEFHGDGMGELSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRSDETVAM 185
            VVGKFVEF G G+  L+++DRATI+NMSPEYGAT GFFP+D  T++YL++TGR    + +
Sbjct:  273 VVGKFVEFFGYGLSNLTISDRATISNMSPEYGATCGFFPIDQETIKYLEITGRETRQIKL 332          
BLAST of CF504668 vs. ExPASy Swiss-Prot
Match: ACOC_CHICK (Cytoplasmic aconitate hydratase OS=Gallus gallus GN=ACO1 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 5.816e-16
Identity = 39/59 (66.10%), Postives = 46/59 (77.97%), Query Frame = 3
Query:    3 GVVGKFVEFHGDGMGELSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRSDETV 179
            GVVGKFVEF G G+ +LS+ADRATIANM PEYGAT  +FPVD +++ YL  TGR  E V
Sbjct:  272 GVVGKFVEFFGPGVAQLSIADRATIANMCPEYGATAAYFPVDDISIGYLVQTGRDKEKV 330          
BLAST of CF504668 vs. ExPASy Swiss-Prot
Match: IREB2_XENLA (Iron-responsive element-binding protein 2 OS=Xenopus laevis GN=ireb2 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.692e-15
Identity = 38/53 (71.70%), Postives = 44/53 (83.02%), Query Frame = 3
Query:    3 GVVGKFVEFHGDGMGELSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTG 161
            GV G FVEF G+G+ +LS+ADR TIANM PEYGAT+ FFPVD VTLQ+LK TG
Sbjct:  341 GVAGTFVEFFGNGVSQLSVADRTTIANMCPEYGATVAFFPVDSVTLQHLKQTG 393          
BLAST of CF504668 vs. ExPASy Swiss-Prot
Match: IREB2_XENTR (Iron-responsive element-binding protein 2 OS=Xenopus tropicalis GN=ireb2 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.887e-15
Identity = 38/60 (63.33%), Postives = 48/60 (80.00%), Query Frame = 3
Query:    3 GVVGKFVEFHGDGMGELSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRSDETVA 182
            GV G FVEF G+G+ +LS+ADR TIANM PEYGAT+ FFPVD VTL++LK TG   ++V+
Sbjct:  343 GVAGTFVEFFGNGVSQLSVADRTTIANMCPEYGATVAFFPVDSVTLRHLKQTGVDVQSVS 402          
The following BLAST results are available for this feature:
BLAST of CF504668 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 48
Match NameE-valueIdentityDescription
ACON_RICCN1.531e-1663.33Aconitate hydratase OS=Rickettsia conorii GN=acnA ... [more]
ACOC_RAT1.531e-1667.80Cytoplasmic aconitate hydratase OS=Rattus norvegic... [more]
ACOC_CAEEL1.999e-1670.18Probable cytoplasmic aconitate hydratase OS=Caenor... [more]
ACON_MYCAV2.611e-1660.66Aconitate hydratase OS=Mycobacterium avium GN=acn ... [more]
ACON_RICPR4.453e-1669.81Aconitate hydratase OS=Rickettsia prowazekii GN=ac... [more]
ACOC_RABIT4.453e-1667.80Cytoplasmic aconitate hydratase OS=Oryctolagus cun... [more]
ACON_RICTY5.816e-1660.00Aconitate hydratase OS=Rickettsia typhi GN=acnA PE... [more]
ACOC_CHICK5.816e-1666.10Cytoplasmic aconitate hydratase OS=Gallus gallus G... [more]
IREB2_XENLA1.692e-1571.70Iron-responsive element-binding protein 2 OS=Xenop... [more]
IREB2_XENTR2.887e-1563.33Iron-responsive element-binding protein 2 OS=Xenop... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-157 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-20_A02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504668 ID=CF504668; Name=CF504668; organism=Citrus sinensis; type=EST; length=185bp
ATGGTGTTGTTGGAAAATTTGTTGAGTTCCATGGGGATGGTATGGGTGAA
CTTTCACTTGCTGACAGAGCTACCATTGCTAATATGTCTCCCGAGTATGG
AGCAACCATGGGGTTCTTTCCTGTGGATCATGTTACTTTACAATATCTCA
AATTGACTGGAAGGAGTGATGAGACAGTGGCAATG
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