CF504672

Overview
NameCF504672
Unique NameCF504672
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length349
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504672 vs. ExPASy Swiss-Prot
Match: CDK9_MOUSE (Cell division protein kinase 9 OS=Mus musculus GN=Cdk9 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.300e-14
Identity = 42/93 (45.16%), Postives = 63/93 (67.74%), Query Frame = 2
Query:   83 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELID-----AFPH---KGNLHLVFEFMETDL 337
            +Y K   +G+GT+G V+KA   +TGQ VA+KK+ +  +KEG   TALREIK+L+ LK  +++ LI+     A P+   KG+++LVF+F E DL
Sbjct:   18 KYEKLAKIGQGTFGEVFKAKHRQTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDL 110          
BLAST of CF504672 vs. ExPASy Swiss-Prot
Match: CDK10_BOVIN (Cell division protein kinase 10 OS=Bos taurus GN=CDK10 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.300e-14
Identity = 38/84 (45.24%), Postives = 59/84 (70.24%), Query Frame = 2
Query:  104 LGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAF--PHKGNLHLVFEFMETDLETVI 349
            +GEGTYG+VY+A DT T + VA+KK+R+ K+K+GV  ++LREI LL  L+ P+I+EL +     H  ++ LV  + E DL +++
Sbjct:   43 IGEGTYGIVYRARDTHTDEIVALKKVRMDKEKDGVPISSLREITLLLRLRHPNIVELKEVVVGNHLESIFLVMGYCEQDLASLL 126          
BLAST of CF504672 vs. ExPASy Swiss-Prot
Match: PHO85_ASHGO (Negative regulator of the PHO system OS=Ashbya gossypii GN=PHO85 PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 4.309e-14
Identity = 40/86 (46.51%), Postives = 56/86 (65.12%), Query Frame = 2
Query:   83 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLE 340
            R+ + E LG GTY  VYK ++  TG  VA+K+++L  + EG   TA+REI L+KELK  +I+ L D    +  L LVFEFM+ DL+
Sbjct:    8 RFKQLERLGNGTYATVYKGLNKTTGLYVALKEVKLDSE-EGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMDNDLK 92          
BLAST of CF504672 vs. ExPASy Swiss-Prot
Match: PEF1_SCHPO (Serine/threonine-protein kinase pef1 OS=Schizosaccharomyces pombe GN=pef1 PE=2 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 4.309e-14
Identity = 42/85 (49.41%), Postives = 55/85 (64.71%), Query Frame = 2
Query:   86 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLE 340
            Y + E LGEGTY  VYK  +  TG+ VA+K IR+    EG   TA+REI L+KEL+ P+I+ L D    +  L LVFE+ME DL+
Sbjct:    3 YQRLEKLGEGTYAHVYKGQNRVTGEIVALKVIRIDAD-EGTPSTAIREISLMKELRHPNIMSLSDVLQTENKLMLVFEYMEKDLK 86          
BLAST of CF504672 vs. ExPASy Swiss-Prot
Match: CDKL1_HUMAN (Cyclin-dependent kinase-like 1 OS=Homo sapiens GN=CDKL1 PE=2 SV=5)

HSP 1 Score: 76.2554 bits (186), Expect = 5.628e-14
Identity = 37/83 (44.58%), Postives = 55/83 (66.27%), Query Frame = 2
Query:   80 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFME 328
            ++Y K   +GEG+YGVV+K  +  TGQ VAIKK    +    +   ALREI++LK+LK P+++ L++ F  K  LHLVFE+ +
Sbjct:    2 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCD 84          
BLAST of CF504672 vs. ExPASy Swiss-Prot
Match: Y7597_DROME (Cell division cycle 2-like protein kinase CG7597 OS=Drosophila melanogaster GN=CG7597 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.351e-14
Identity = 42/103 (40.78%), Postives = 61/103 (59.22%), Query Frame = 2
Query:   59 DLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIEL----------IDAFPHKGNLHLVFEFMETDL 337
            D  ++  D +     +GEGTYG VYKA D  T   VA+KK+RL  +KEG   TA+REIK+L++L   +I+ L          ++    KG+ +LVFE+M+ DL
Sbjct:  795 DWGERCVDVFEMIAQIGEGTYGQVYKARDHHTNDMVALKKVRLEHEKEGFPITAVREIKILRQLNHRNIVNLHEIVTDKQDAVEFRKDKGSFYLVFEYMDHDL 897          
BLAST of CF504672 vs. ExPASy Swiss-Prot
Match: PHO85_YEAST (Cyclin-dependent protein kinase PHO85 OS=Saccharomyces cerevisiae GN=PHO85 PE=1 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 7.351e-14
Identity = 39/88 (44.32%), Postives = 57/88 (64.77%), Query Frame = 2
Query:   77 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLE 340
            + ++ + E LG GTY  VYK ++  TG  VA+K+++L  + EG   TA+REI L+KELK  +I+ L D    +  L LVFEFM+ DL+
Sbjct:    4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSE-EGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMDNDLK 90          
BLAST of CF504672 vs. ExPASy Swiss-Prot
Match: CKB22_ARATH (Cyclin-dependent kinase B2-2 OS=Arabidopsis thaliana GN=CDKB2-2 PE=1 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 7.351e-14
Identity = 44/96 (45.83%), Postives = 62/96 (64.58%), Query Frame = 2
Query:   80 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDA-----FPHKGNLHLVFEFMETDLETVI 349
            + + K E +GEGTYG VY+A +  TG  VA+KK RL + +EGV  T LREI +L+ L + PHI+ L+D         K  L+LVFE+++TDL+  I
Sbjct:   14 EAFEKLEKVGEGTYGKVYRAREKATGMIVALKKTRLHEDEEGVPPTTLREISILRMLARDPHIVRLMDVKQGINKEGKTVLYLVFEYVDTDLKKFI 109          
BLAST of CF504672 vs. ExPASy Swiss-Prot
Match: CDKL1_DANRE (Cyclin-dependent kinase-like 1 OS=Danio rerio GN=cdkl1 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.351e-14
Identity = 37/83 (44.58%), Postives = 55/83 (66.27%), Query Frame = 2
Query:   80 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFME 328
            ++Y K   +GEG+YGVV+K  +  TGQ VAIKK    +    +   ALREI++LK+LK P+++ L++ F  K  LHLVFE+ +
Sbjct:    2 EKYEKISKIGEGSYGVVFKCRNKDTGQIVAIKKFVESEDDPIIKKIALREIRMLKQLKHPNLVNLMEVFRRKRKLHLVFEYCD 84          
BLAST of CF504672 vs. ExPASy Swiss-Prot
Match: CDK9_CHICK (Cell division protein kinase 9 OS=Gallus gallus GN=CDK9 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.351e-14
Identity = 45/109 (41.28%), Postives = 69/109 (63.30%), Query Frame = 2
Query:   35 KNPTMAEVDLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELID-----AFPH---KGNLHLVFEFMETDL 337
            K   M E     +V+ +Y K   +G+GT+G V+KA   +TG+ VA+KK+ +  +KEG   TALREIK+L+ LK  +++ LI+     A P+   KG+++LVF+F E DL
Sbjct:    3 KQYDMVECPFCDEVS-KYEKLAKIGQGTFGEVFKAKHRQTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDL 110          
The following BLAST results are available for this feature:
BLAST of CF504672 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 186
Match NameE-valueIdentityDescription
CDK9_MOUSE3.300e-1445.16Cell division protein kinase 9 OS=Mus musculus GN=... [more]
CDK10_BOVIN3.300e-1445.24Cell division protein kinase 10 OS=Bos taurus GN=C... [more]
PHO85_ASHGO4.309e-1446.51Negative regulator of the PHO system OS=Ashbya gos... [more]
PEF1_SCHPO4.309e-1449.41Serine/threonine-protein kinase pef1 OS=Schizosacc... [more]
CDKL1_HUMAN5.628e-1444.58Cyclin-dependent kinase-like 1 OS=Homo sapiens GN=... [more]
Y7597_DROME7.351e-1440.78Cell division cycle 2-like protein kinase CG7597 O... [more]
PHO85_YEAST7.351e-1444.32Cyclin-dependent protein kinase PHO85 OS=Saccharom... [more]
CKB22_ARATH7.351e-1445.83Cyclin-dependent kinase B2-2 OS=Arabidopsis thalia... [more]
CDKL1_DANRE7.351e-1444.58Cyclin-dependent kinase-like 1 OS=Danio rerio GN=c... [more]
CDK9_CHICK7.351e-1441.28Cell division protein kinase 9 OS=Gallus gallus GN... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-161 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-20_A09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504672 ID=CF504672; Name=CF504672; organism=Citrus sinensis; type=EST; length=349bp
CCTAAAAGATAAAATATACAATTACCAGAAATATAAAAATCCGACGATGG
CAGAAGTCGATTTGTCGAAGAAAGTCGCTGATAGATACCTGAAACGTGAG
GTTCTTGGTGAAGGTACATACGGTGTCGTTTACAAAGCCATTGATACTAA
GACAGGACAGACTGTTGCTATAAAAAAAATTCGGCTTGGGAAGCAAAAGG
AGGGGGTGAATTTTACAGCACTAAGAGAAATAAAGCTGCTGAAAGAACTT
AAAAGTCCACATATAATTGAGTTGATTGATGCATTCCCTCACAAGGGGAA
CTTGCATCTTGTTTTTGAGTTTATGGAGACTGACCTCGAAACGGTTATT
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