CF504672

Overview
NameCF504672
Unique NameCF504672
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length349
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504672 vs. ExPASy Swiss-Prot
Match: CDK17_HUMAN (Cell division protein kinase 17 OS=Homo sapiens GN=CDK17 PE=1 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 2.139e-13
Identity = 42/105 (40.00%), Postives = 65/105 (61.90%), Query Frame = 2
Query:   26 QKYKNPTMAEVDLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLE 340
            ++ +  +++E+   K   + Y+K E LGEGTY  VYK     T   VA+K+IRL + +EG   TA+RE+ LLK+LK  +I+ L D      +L LVFE+++ DL+
Sbjct:  174 RRSRRASLSEIGFGKM--ETYIKLEKLGEGTYATVYKGRSKLTENLVALKEIRL-EHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEYLDKDLK 275          
BLAST of CF504672 vs. ExPASy Swiss-Prot
Match: CDK15_MOUSE (Cell division protein kinase 15 OS=Mus musculus GN=Cdk15 PE=2 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 2.139e-13
Identity = 44/87 (50.57%), Postives = 52/87 (59.77%), Query Frame = 2
Query:   77 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETDL 337
            A  YL  E LGEG+Y  VYK I    GQ VA+K I +  + EGV FTA+RE  LLK LK  +I+ L D    K  L  VFE+M TDL
Sbjct:   98 ASSYLNLEKLGEGSYAKVYKGISRINGQLVALKVISMNAE-EGVPFTAIREASLLKGLKHANIVLLHDIVHTKETLTFVFEYMHTDL 183          
BLAST of CF504672 vs. ExPASy Swiss-Prot
Match: CDKL1_RAT (Cyclin-dependent kinase-like 1 OS=Rattus norvegicus GN=Cdkl1 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.793e-13
Identity = 36/81 (44.44%), Postives = 54/81 (66.67%), Query Frame = 2
Query:   80 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEF 322
            ++Y K   +GEG+YGVV+K  +  TGQ VAIK+    +    +   ALREI++LK+LK P+++ L++ F  K  LHLVFE+
Sbjct:    2 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKRFLETEDDPVIKKIALREIRMLKQLKHPNLVSLLEVFRRKRRLHLVFEY 82          
BLAST of CF504672 vs. ExPASy Swiss-Prot
Match: CDK16_RAT (Cell division protein kinase 16 OS=Rattus norvegicus GN=Cdk16 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.793e-13
Identity = 41/99 (41.41%), Postives = 63/99 (63.64%), Query Frame = 2
Query:   44 TMAEVDLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLE 340
            +++E+   K   + Y+K + LGEGTY  VYK     T   VA+K+IRL + +EG   TA+RE+ LLK+LK  +I+ L D    + +L LVFE+++ DL+
Sbjct:  153 SLSEIGFGK--LETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRL-EHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDKDLK 248          
BLAST of CF504672 vs. ExPASy Swiss-Prot
Match: PHO85_DEBHA (Negative regulator of the PHO system OS=Debaryomyces hansenii GN=PHO85 PE=3 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 3.648e-13
Identity = 40/88 (45.45%), Postives = 55/88 (62.50%), Query Frame = 2
Query:   77 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLE 340
            + ++ + E LGEGTY  VYK  +   GQ VA+K+I L  + EG   TA+REI L+KEL   +I+ L D    +  L LVFEFM+ DL+
Sbjct:    5 SSQFQQLEKLGEGTYATVYKGRNRTNGQLVALKEINLDSE-EGTPSTAIREISLMKELDHENIVTLYDVIHTENKLTLVFEFMDKDLK 91          
BLAST of CF504672 vs. ExPASy Swiss-Prot
Match: CDKC3_ORYSJ (Cyclin-dependent kinase C-3 OS=Oryza sativa subsp. japonica GN=CDKC-1 PE=2 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 3.648e-13
Identity = 41/108 (37.96%), Postives = 64/108 (59.26%), Query Frame = 2
Query:   71 KVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIEL---------------IDAFPHKGNLHLVFEFMETDLETVI 349
            +  D + +   +GEGTYG V++A+D  TG+  A+KKI+L   KEG     LREIKLLK+L   +II L                D + ++G++++VFE+M+ DL+ V+
Sbjct:   22 RTVDCFRRIRKIGEGTYGEVFEAMDIITGERAALKKIKLDDGKEGFPRQILREIKLLKKLDHENIIRLKEIVVSPGTAHGAGGSDDYMYRGDIYMVFEYMDHDLKKVL 129          
BLAST of CF504672 vs. ExPASy Swiss-Prot
Match: CDK20_MACMU (Cell division protein kinase 20 OS=Macaca mulatta GN=CDK20 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.648e-13
Identity = 38/91 (41.76%), Postives = 59/91 (64.84%), Query Frame = 2
Query:   80 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPHKGNLHLVFEFMETDLETVI 349
            D+Y     +GEG +G+V+KA   +TG+ VA+KK+ L + ++G    ALREIK L+E+  + ++++L   FPH G   L FEFM +DL  V+
Sbjct:    2 DQYCILGRIGEGAHGIVFKAKHVETGEIVALKKVALRRLEDGFPNQALREIKALQEMGDNQYVVQLKAVFPHGGGFVLAFEFMLSDLAEVV 92          
BLAST of CF504672 vs. ExPASy Swiss-Prot
Match: CDKG2_ORYSJ (Cyclin-dependent kinase G-2 OS=Oryza sativa subsp. japonica GN=CDKG-2 PE=2 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 4.765e-13
Identity = 36/92 (39.13%), Postives = 59/92 (64.13%), Query Frame = 2
Query:   80 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKG--NLHLVFEFMETDLETVI 349
            D + +   + EGTYGVVY+A D KTG+ VA+KK+++ K++EG   T+LREI +L     P I+++ +        ++ +V E+ME DL+ V+
Sbjct:  363 DEFERLNKINEGTYGVVYRARDKKTGEIVALKKVKMEKEREGFPLTSLREINILLSFHHPSIVDVKEVVVGSSLDSIFMVMEYMEHDLKGVM 454          
BLAST of CF504672 vs. ExPASy Swiss-Prot
Match: CDKG2_ORYSI (Cyclin-dependent kinase G-2 OS=Oryza sativa subsp. indica GN=CDKG-2 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.765e-13
Identity = 36/92 (39.13%), Postives = 59/92 (64.13%), Query Frame = 2
Query:   80 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKG--NLHLVFEFMETDLETVI 349
            D + +   + EGTYGVVY+A D KTG+ VA+KK+++ K++EG   T+LREI +L     P I+++ +        ++ +V E+ME DL+ V+
Sbjct:  363 DEFERLNKINEGTYGVVYRARDKKTGEIVALKKVKMEKEREGFPLTSLREINILLSFHHPSIVDVKEVVVGSSLDSIFMVMEYMEHDLKGVM 454          
BLAST of CF504672 vs. ExPASy Swiss-Prot
Match: CDK8_DICDI (Probable cyclin-dependent kinase 8 OS=Dictyostelium discoideum GN=cdk8 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.223e-13
Identity = 42/95 (44.21%), Postives = 60/95 (63.16%), Query Frame = 2
Query:   74 VADRYLKREVLGEGTYGVVYKAIDTKT-GQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAF--PHKGNLHLVFEFMETDLETVI 349
            V ++Y     +G GTYG+VYKA D K     VA+KK R  K+ EG++ TA REI LLKEL + +I++L+D    P    L+L+F++ E DL  +I
Sbjct:   40 VQEKYTFSYEIGSGTYGMVYKADDKKRPNNKVAVKKFRSTKEGEGLSLTAYREIGLLKELSNENIVKLLDVCLNPKDKLLYLIFDYAEFDLFGII 134          
The following BLAST results are available for this feature:
BLAST of CF504672 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 186
Match NameE-valueIdentityDescription
CDK17_HUMAN2.139e-1340.00Cell division protein kinase 17 OS=Homo sapiens GN... [more]
CDK15_MOUSE2.139e-1350.57Cell division protein kinase 15 OS=Mus musculus GN... [more]
CDKL1_RAT2.793e-1344.44Cyclin-dependent kinase-like 1 OS=Rattus norvegicu... [more]
CDK16_RAT2.793e-1341.41Cell division protein kinase 16 OS=Rattus norvegic... [more]
PHO85_DEBHA3.648e-1345.45Negative regulator of the PHO system OS=Debaryomyc... [more]
CDKC3_ORYSJ3.648e-1337.96Cyclin-dependent kinase C-3 OS=Oryza sativa subsp.... [more]
CDK20_MACMU3.648e-1341.76Cell division protein kinase 20 OS=Macaca mulatta ... [more]
CDKG2_ORYSJ4.765e-1339.13Cyclin-dependent kinase G-2 OS=Oryza sativa subsp.... [more]
CDKG2_ORYSI4.765e-1339.13Cyclin-dependent kinase G-2 OS=Oryza sativa subsp.... [more]
CDK8_DICDI6.223e-1344.21Probable cyclin-dependent kinase 8 OS=Dictyosteliu... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-161 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-20_A09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504672 ID=CF504672; Name=CF504672; organism=Citrus sinensis; type=EST; length=349bp
CCTAAAAGATAAAATATACAATTACCAGAAATATAAAAATCCGACGATGG
CAGAAGTCGATTTGTCGAAGAAAGTCGCTGATAGATACCTGAAACGTGAG
GTTCTTGGTGAAGGTACATACGGTGTCGTTTACAAAGCCATTGATACTAA
GACAGGACAGACTGTTGCTATAAAAAAAATTCGGCTTGGGAAGCAAAAGG
AGGGGGTGAATTTTACAGCACTAAGAGAAATAAAGCTGCTGAAAGAACTT
AAAAGTCCACATATAATTGAGTTGATTGATGCATTCCCTCACAAGGGGAA
CTTGCATCTTGTTTTTGAGTTTATGGAGACTGACCTCGAAACGGTTATT
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