CF504672

Overview
NameCF504672
Unique NameCF504672
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length349
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig808 contig Csv1_Contig808:1..349. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF504672 vs. ExPASy Swiss-Prot
Match: CC2H1_TRYBB (Cell division control protein 2 homolog 1 OS=Trypanosoma brucei brucei GN=CRK1 PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.431e-17
Identity = 44/89 (49.44%), Postives = 63/89 (70.79%), Query Frame = 2
Query:   74 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLE 340
            +  RY + + +GEG+YGVV++A D  TG  VA+K+IRL K++EGV  TA+REI +LKEL+  +I+ L+D    +  L LVFE ME DL+
Sbjct:    1 MGSRYERLQKIGEGSYGVVFRARDVTTGTIVAVKRIRLEKEEEGVPCTAIREISILKELRHENIVRLLDVCHSEKRLTLVFECMEMDLK 89          
BLAST of CF504672 vs. ExPASy Swiss-Prot
Match: CDC2_DICDI (Cell division control protein 2 homolog OS=Dictyostelium discoideum GN=cdk1 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.869e-17
Identity = 46/86 (53.49%), Postives = 61/86 (70.93%), Query Frame = 2
Query:   83 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLE 340
            RY K E LGEGTYG VYKA +  TG+ VA+KKIRL  + +GV  TALREI LLKE+  P+++ L D    +  L+LVFE+++ DL+
Sbjct:    9 RYQKLEKLGEGTYGKVYKAKEKATGRMVALKKIRL--EDDGVPSTALREISLLKEVPHPNVVSLFDVLHCQNRLYLVFEYLDQDLK 92          
BLAST of CF504672 vs. ExPASy Swiss-Prot
Match: CDC28_CANAL (Cell division control protein 28 OS=Candida albicans GN=CDC28 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.869e-17
Identity = 49/89 (55.06%), Postives = 64/89 (71.91%), Query Frame = 2
Query:   86 YLKREVLGEGTYGVVYKAIDTK-TGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAF---PHKGNLHLVFEFMETDLE 340
            Y ++E +GEGTYGVVYKA+DTK   + VA+KKIRL  + EGV  TA+REI LLKE+K  +I+ L D      HK  L+LVFEF++ DL+
Sbjct:    7 YQRQEKVGEGTYGVVYKALDTKHNNRVVALKKIRLESEDEGVPSTAIREISLLKEMKDDNIVRLYDIIHSDSHK--LYLVFEFLDLDLK 93          
BLAST of CF504672 vs. ExPASy Swiss-Prot
Match: CC2H1_TRYCO (Cell division control protein 2 homolog 1 OS=Trypanosoma congolense GN=CRK1 PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.869e-17
Identity = 44/89 (49.44%), Postives = 62/89 (69.66%), Query Frame = 2
Query:   74 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLE 340
            +  RY + E +GEG+YGVVY+A D  T   VA+K+IRL   +EGV  TA+REI +LKEL+  +I+ L+D    +  L+LVFE+ME DL+
Sbjct:    1 MGSRYQRLEKIGEGSYGVVYRARDITTDVIVALKRIRLESVEEGVPCTAIREISILKELRHENIVRLLDVCHSENRLNLVFEYMEMDLK 89          
BLAST of CF504672 vs. ExPASy Swiss-Prot
Match: CTK1_SCHPO (CTD kinase subunit alpha OS=Schizosaccharomyces pombe GN=lsk1 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 2.441e-17
Identity = 40/88 (45.45%), Postives = 64/88 (72.73%), Query Frame = 2
Query:   86 YLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVI 349
            Y K + +GEGTYG VYKAI+T TG  VA+K+IRL ++K+G   T +RE+K+L+ L+  +I+ L++    K ++++VFE+M+ DL  V+
Sbjct:  277 YEKIDQIGEGTYGKVYKAINTVTGDLVALKRIRLEQEKDGFPITTVREVKILQRLRHKNIVRLLEIMVEKSSVYMVFEYMDHDLTGVL 364          
BLAST of CF504672 vs. ExPASy Swiss-Prot
Match: CDC2D_ANTMA (Cell division control protein 2 homolog D OS=Antirrhinum majus GN=CDC2D PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 4.164e-17
Identity = 47/107 (43.93%), Postives = 68/107 (63.55%), Query Frame = 2
Query:   47 MAEVDLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPHKGN-----LHLVFEFMETDLETVI 349
            MAE        D ++K E +GEGTYG VY+A++  TG+ VA+KK RL + +EGV  T LRE+ LL+ L + PH++ L+D    +       L+LVFE+M+TDL+  I
Sbjct:    1 MAEEKSKSSAMDAFVKLEKVGEGTYGKVYRAMEKSTGKIVALKKTRLHEDEEGVPPTTLREVSLLRMLSRDPHVVRLLDVKQGQNKEGKTVLYLVFEYMDTDLKKYI 107          
BLAST of CF504672 vs. ExPASy Swiss-Prot
Match: CDC28_ENCCU (Probable cell division control protein 28 homolog OS=Encephalitozoon cuniculi GN=CDC28 PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 4.164e-17
Identity = 43/88 (48.86%), Postives = 59/88 (67.05%), Query Frame = 2
Query:   74 VADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETDL 337
            + + + K E +GEGTYGVVYKA +  T + VA+KKIRL  + EG+  T +REI LLK LK   I+EL D   +   ++LVFE++E DL
Sbjct:    1 MTESFQKLEKIGEGTYGVVYKARERNTNRVVALKKIRLENENEGIPATTIREILLLKNLKHSTIVELSDVIYNNNKMYLVFEYVELDL 88          
BLAST of CF504672 vs. ExPASy Swiss-Prot
Match: CDC2_DROME (Cell division control protein 2 homolog OS=Drosophila melanogaster GN=cdc2 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 5.439e-17
Identity = 45/83 (54.22%), Postives = 57/83 (68.67%), Query Frame = 2
Query:   92 KREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLE 340
            K E +GEGTYGVVYK  +  TGQ VA+KKIRL    EGV  TA+REI LLKELK  +I+ L D    +  ++L+FEF+  DL+
Sbjct:    6 KIEKIGEGTYGVVYKGRNRLTGQIVAMKKIRLESDDEGVPSTAIREISLLKELKHENIVCLEDVLMEENRIYLIFEFLSMDLK 88          
BLAST of CF504672 vs. ExPASy Swiss-Prot
Match: CDC28_YEAST (Cell division control protein 28 OS=Saccharomyces cerevisiae GN=CDC28 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 5.439e-17
Identity = 50/91 (54.95%), Postives = 64/91 (70.33%), Query Frame = 2
Query:   86 YLKREVLGEGTYGVVYKAIDTKTGQ---TVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELID---AFPHKGNLHLVFEFMETDLE 340
            Y + E +GEGTYGVVYKA+D + GQ    VA+KKIRL  + EGV  TA+REI LLKELK  +I+ L D   +  HK  L+LVFEF++ DL+
Sbjct:    8 YKRLEKVGEGTYGVVYKALDLRPGQGQRVVALKKIRLESEDEGVPSTAIREISLLKELKDDNIVRLYDIVHSDAHK--LYLVFEFLDLDLK 96          
BLAST of CF504672 vs. ExPASy Swiss-Prot
Match: CDC21_MEDSA (Cell division control protein 2 homolog 1 (Fragment) OS=Medicago sativa GN=CDC2A PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 5.439e-17
Identity = 43/81 (53.09%), Postives = 59/81 (72.84%), Query Frame = 2
Query:   98 EVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLE 340
            E +GEGTYGVVYKA D  T +T+A+KKIRL ++ EGV  TA+REI LLKE++  +I+ L D       L+LVFE+++ DL+
Sbjct:    5 EKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHRNIVRLQDVVHSDKRLYLVFEYLDLDLK 85          
The following BLAST results are available for this feature:
BLAST of CF504672 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 186
Match NameE-valueIdentityDescription
CC2H1_TRYBB1.431e-1749.44Cell division control protein 2 homolog 1 OS=Trypa... [more]
CDC2_DICDI1.869e-1753.49Cell division control protein 2 homolog OS=Dictyos... [more]
CDC28_CANAL1.869e-1755.06Cell division control protein 28 OS=Candida albica... [more]
CC2H1_TRYCO1.869e-1749.44Cell division control protein 2 homolog 1 OS=Trypa... [more]
CTK1_SCHPO2.441e-1745.45CTD kinase subunit alpha OS=Schizosaccharomyces po... [more]
CDC2D_ANTMA4.164e-1743.93Cell division control protein 2 homolog D OS=Antir... [more]
CDC28_ENCCU4.164e-1748.86Probable cell division control protein 28 homolog ... [more]
CDC2_DROME5.439e-1754.22Cell division control protein 2 homolog OS=Drosoph... [more]
CDC28_YEAST5.439e-1754.95Cell division control protein 28 OS=Saccharomyces ... [more]
CDC21_MEDSA5.439e-1753.09Cell division control protein 2 homolog 1 (Fragmen... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-161 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-20_A09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504672 ID=CF504672; Name=CF504672; organism=Citrus sinensis; type=EST; length=349bp
CCTAAAAGATAAAATATACAATTACCAGAAATATAAAAATCCGACGATGG
CAGAAGTCGATTTGTCGAAGAAAGTCGCTGATAGATACCTGAAACGTGAG
GTTCTTGGTGAAGGTACATACGGTGTCGTTTACAAAGCCATTGATACTAA
GACAGGACAGACTGTTGCTATAAAAAAAATTCGGCTTGGGAAGCAAAAGG
AGGGGGTGAATTTTACAGCACTAAGAGAAATAAAGCTGCTGAAAGAACTT
AAAAGTCCACATATAATTGAGTTGATTGATGCATTCCCTCACAAGGGGAA
CTTGCATCTTGTTTTTGAGTTTATGGAGACTGACCTCGAAACGGTTATT
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